Protein–RNA interactions for Protein: P38956

SNF11, Transcription regulatory protein SNF11, yeastyeast

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF11P38956 NSR1YGR159C 1245 nt15.9■□□□□ 0.14
SNF11P38956 YML009W-BYML009W-B 477 nt15.8■□□□□ 0.12
SNF11P38956 NOP1YDL014W 984 nt15.4■□□□□ 0.06
SNF11P38956 MDJ1YFL016C 1536 nt14.16□□□□□ -0.14
SNF11P38956 YKL036CYKL036C 393 nt14.01□□□□□ -0.17
SNF11P38956 SRX1YKL086W 384 nt13.39□□□□□ -0.27
SNF11P38956 Q0297Q0297 156 nt13.38□□□□□ -0.27
SNF11P38956 YJL027CYJL027C 417 nt13.15□□□□□ -0.3
SNF11P38956 YCR051WYCR051W 669 nt12.69□□□□□ -0.38
SNF11P38956 SCS3YGL126W 1143 nt12.6□□□□□ -0.39
SNF11P38956 DBP2YNL112W 1641 nt12.44□□□□□ -0.42
SNF11P38956 YBR190WYBR190W 312 nt12.2□□□□□ -0.46
SNF11P38956 TRN1tP(UGG)A 72 nt12.18□□□□□ -0.46
SNF11P38956 SUF9tP(UGG)F 72 nt12.18□□□□□ -0.46
SNF11P38956 SUF8tP(UGG)H 72 nt12.18□□□□□ -0.46
SNF11P38956 tP(UGG)LtP(UGG)L 72 nt12.18□□□□□ -0.46
SNF11P38956 SUF7tP(UGG)M 72 nt12.18□□□□□ -0.46
SNF11P38956 tP(UGG)N1tP(UGG)N1 72 nt12.18□□□□□ -0.46
SNF11P38956 tP(UGG)N2tP(UGG)N2 72 nt12.18□□□□□ -0.46
SNF11P38956 tP(UGG)O1tP(UGG)O1 72 nt12.18□□□□□ -0.46
SNF11P38956 SUF11tP(UGG)O2 72 nt12.18□□□□□ -0.46
SNF11P38956 YOL085CYOL085C 342 nt12.11□□□□□ -0.47
SNF11P38956 SSA3YBL075C 1950 nt12.06□□□□□ -0.48
SNF11P38956 CCC1YLR220W 969 nt12.04□□□□□ -0.48
SNF11P38956 RPP1BYDL130W 321 nt12□□□□□ -0.49
SNF11P38956 RTC3YHR087W 336 nt11.91□□□□□ -0.5
SNF11P38956 PKP1YIL042C 1185 nt11.89□□□□□ -0.51
SNF11P38956 RVS167YDR388W 1449 nt11.81□□□□□ -0.52
SNF11P38956 SCJ1YMR214W 1134 nt11.57□□□□□ -0.56
SNF11P38956 tP(UGG)O3tP(UGG)O3 72 nt11.47□□□□□ -0.57
SNF11P38956 PET122YER153C 765 nt11.43□□□□□ -0.58
SNF11P38956 SCR1SCR1 522 nt11.36□□□□□ -0.59
SNF11P38956 SHR5YOL110W 714 nt11.32□□□□□ -0.6
SNF11P38956 ATS1YAL020C 1002 nt11.25□□□□□ -0.61
SNF11P38956 YDJ1YNL064C 1230 nt11.15□□□□□ -0.62
SNF11P38956 PUT4YOR348C 1884 nt11.12□□□□□ -0.63
SNF11P38956 RRN5YLR141W 1092 nt11.1□□□□□ -0.63
SNF11P38956 URN1YPR152C 1398 nt11.07□□□□□ -0.64
SNF11P38956 DEP1YAL013W 1218 nt10.98□□□□□ -0.65
SNF11P38956 RPN10YHR200W 807 nt10.97□□□□□ -0.65
SNF11P38956 OPI9YLR338W 858 nt10.96□□□□□ -0.65
SNF11P38956 SAH1YER043C 1350 nt10.89□□□□□ -0.67
SNF11P38956 YER088W-BYER088W-B 147 nt10.88□□□□□ -0.67
SNF11P38956 YNL208WYNL208W 600 nt10.88□□□□□ -0.67
SNF11P38956 GAR1YHR089C 618 nt10.87□□□□□ -0.67
SNF11P38956 ARE1YCR048W 1833 nt10.86□□□□□ -0.67
SNF11P38956 RSB1YOR049C 1065 nt10.85□□□□□ -0.67
SNF11P38956 POA1YBR022W 534 nt10.77□□□□□ -0.69
SNF11P38956 YHR049C-AYHR049C-A 297 nt10.75□□□□□ -0.69
SNF11P38956 PUN1YLR414C 792 nt10.68□□□□□ -0.7
SNF11P38956 BSC6YOL137W 1494 nt10.57□□□□□ -0.72
SNF11P38956 YJR018WYJR018W 363 nt10.57□□□□□ -0.72
SNF11P38956 TIR1YER011W 765 nt10.53□□□□□ -0.72
SNF11P38956 SPT5YML010W 3192 nt10.53□□□□□ -0.72
SNF11P38956 PTC2YER089C 1395 nt10.52□□□□□ -0.72
SNF11P38956 BUD23YCR047C 828 nt10.51□□□□□ -0.73
SNF11P38956 SSA4YER103W 1929 nt10.49□□□□□ -0.73
SNF11P38956 PST2YDR032C 597 nt10.44□□□□□ -0.74
SNF11P38956 NAB2YGL122C 1578 nt10.43□□□□□ -0.74
SNF11P38956 RPP2BYDR382W 333 nt10.38□□□□□ -0.75
SNF11P38956 SSA1YAL005C 1929 nt10.38□□□□□ -0.75
SNF11P38956 YJR120WYJR120W 351 nt10.28□□□□□ -0.76
SNF11P38956 DAL1YIR027C 1383 nt10.26□□□□□ -0.77
SNF11P38956 INM2YDR287W 879 nt10.26□□□□□ -0.77
SNF11P38956 FPR4YLR449W 1179 nt10.22□□□□□ -0.77
SNF11P38956 BDF1YLR399C 2061 nt10.21□□□□□ -0.78
SNF11P38956 FIS1YIL065C 468 nt10.2□□□□□ -0.78
SNF11P38956 PHO4YFR034C 939 nt10.14□□□□□ -0.79
SNF11P38956 SRB2YHR041C 633 nt10.09□□□□□ -0.79
SNF11P38956 BDH2YAL061W 1254 nt10.09□□□□□ -0.79
SNF11P38956 YBL100CYBL100C 315 nt10.09□□□□□ -0.79
SNF11P38956 PAC11YDR488C 1602 nt10.07□□□□□ -0.8
SNF11P38956 TAT1YBR069C 1860 nt10.04□□□□□ -0.8
SNF11P38956 SHU1YHL006C 453 nt10.02□□□□□ -0.81
SNF11P38956 WWM1YFL010C 636 nt10□□□□□ -0.81
SNF11P38956 YGR021WYGR021W 873 nt9.99□□□□□ -0.81
SNF11P38956 YPS1YLR120C 1710 nt9.99□□□□□ -0.81
SNF11P38956 YKL097CYKL097C 411 nt9.98□□□□□ -0.81
SNF11P38956 LSM3YLR438C-A 270 nt9.96□□□□□ -0.82
SNF11P38956 TRM9YML014W 840 nt9.96□□□□□ -0.82
SNF11P38956 MEP2YNL142W 1500 nt9.96□□□□□ -0.82
SNF11P38956 FUN26YAL022C 1554 nt9.96□□□□□ -0.82
SNF11P38956 YDR095CYDR095C 411 nt9.92□□□□□ -0.82
SNF11P38956 YHR165W-AYHR165W-A 312 nt9.92□□□□□ -0.82
SNF11P38956 YFL021C-AYFL021C-A 855 nt9.91□□□□□ -0.82
SNF11P38956 ALF1YNL148C 765 nt9.91□□□□□ -0.82
SNF11P38956 HOM6YJR139C 1080 nt9.88□□□□□ -0.83
SNF11P38956 YAL037C-BYAL037C-B 975 nt9.88□□□□□ -0.83
SNF11P38956 NVJ2YPR091C 2313 nt9.87□□□□□ -0.83
SNF11P38956 CCT6YDR188W 1641 nt9.83□□□□□ -0.84
SNF11P38956 SUF2tP(AGG)C 72 nt9.82□□□□□ -0.84
SNF11P38956 SUF10tP(AGG)N 72 nt9.82□□□□□ -0.84
SNF11P38956 MNP1YGL068W 585 nt9.75□□□□□ -0.85
SNF11P38956 RPP2AYOL039W 321 nt9.75□□□□□ -0.85
SNF11P38956 RKM5YLR137W 1104 nt9.74□□□□□ -0.85
SNF11P38956 DCW1YKL046C 1350 nt9.74□□□□□ -0.85
SNF11P38956 YMR090WYMR090W 684 nt9.71□□□□□ -0.86
SNF11P38956 SIS1YNL007C 1059 nt9.71□□□□□ -0.86
SNF11P38956 EMI2YDR516C 1503 nt9.66□□□□□ -0.86
SNF11P38956 PTP1YDL230W 1008 nt9.66□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms