RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W PAN3P36102 679 aaPredicted RBP3.74□□□□□ -1.81
VPS29YHR012W QDR3P38227 689 aa3.74□□□□□ -1.81
VPS29YHR012W COS8P38723 381 aa3.74□□□□□ -1.81
VPS29YHR012W RRF1P38771 230 aa3.74□□□□□ -1.81
VPS29YHR012W SWT21P53873 357 aaPredicted RBP3.74□□□□□ -1.81
VPS29YHR012W YMR181CQ03231 154 aa3.74□□□□□ -1.81
VPS29YHR012W THI74Q04083 370 aa3.74□□□□□ -1.81
VPS29YHR012W SYM1Q06563 197 aa3.74□□□□□ -1.81
VPS29YHR012W RDI1Q12434 202 aa3.74□□□□□ -1.81
VPS29YHR012W PET494P07390 489 aaPredicted RBP3.73□□□□□ -1.81
VPS29YHR012W POP8P38208 133 aa3.73□□□□□ -1.81
VPS29YHR012W CDS1P38221 457 aa3.73□□□□□ -1.81
VPS29YHR012W ERV15P38312 142 aa3.73□□□□□ -1.81
VPS29YHR012W YER137CP40083 148 aaKnown RBP3.73□□□□□ -1.81
VPS29YHR012W YGR210CP42942 411 aa3.73□□□□□ -1.81
VPS29YHR012W CAF16P43569 289 aa3.73□□□□□ -1.81
VPS29YHR012W ARP3P47117 449 aaKnown RBP3.73□□□□□ -1.81
VPS29YHR012W YBR298C-AQ8TGK4 73 aa3.73□□□□□ -1.81
VPS29YHR012W CYC3P06182 269 aa3.72□□□□□ -1.81
VPS29YHR012W QCR2P07257 368 aa3.72□□□□□ -1.81
VPS29YHR012W MRS4P23500 304 aa3.72□□□□□ -1.81
VPS29YHR012W ACB1P31787 87 aa3.72□□□□□ -1.81
VPS29YHR012W RRT1P38192 103 aa3.72□□□□□ -1.81
VPS29YHR012W VMA7P39111 118 aa3.72□□□□□ -1.81
VPS29YHR012W RPL13BP40212 199 aaKnown RBP3.72□□□□□ -1.81
VPS29YHR012W POR2P40478 281 aa3.72□□□□□ -1.81
VPS29YHR012W SNX4P47057 423 aa3.72□□□□□ -1.81
VPS29YHR012W YAP1802P53309 568 aa3.72□□□□□ -1.81
VPS29YHR012W FYV6P53913 173 aa3.72□□□□□ -1.81
VPS29YHR012W EST3Q03096 181 aa3.72□□□□□ -1.81
VPS29YHR012W YLR224WQ05947 369 aa3.72□□□□□ -1.81
VPS29YHR012W FMP16Q12497 93 aa3.72□□□□□ -1.81
VPS29YHR012W RPL13AQ12690 199 aaPredicted RBP3.72□□□□□ -1.81
VPS29YHR012W SOD1P00445 154 aaKnown RBP3.71□□□□□ -1.82
VPS29YHR012W ARG80P07249 177 aa3.71□□□□□ -1.82
VPS29YHR012W MRP17P28778 131 aa3.71□□□□□ -1.82
VPS29YHR012W YBL071CP38185 102 aa3.71□□□□□ -1.82
VPS29YHR012W NSA2P40078 261 aaKnown RBP3.71□□□□□ -1.82
VPS29YHR012W HAM1P47119 197 aaKnown RBP3.71□□□□□ -1.82
VPS29YHR012W CAX4P53223 239 aa3.71□□□□□ -1.82
VPS29YHR012W IRC23Q08416 157 aa3.71□□□□□ -1.82
VPS29YHR012W TRM13Q12383 476 aa3.71□□□□□ -1.82
VPS29YHR012W CKS1P20486 150 aaKnown RBP3.7□□□□□ -1.82
VPS29YHR012W YCR016WP25617 290 aaKnown RBP3.7□□□□□ -1.82
VPS29YHR012W FPR2P32472 135 aa3.7□□□□□ -1.82
VPS29YHR012W AVT5P38176 459 aa3.7□□□□□ -1.82
VPS29YHR012W IMD2P38697 523 aaKnown RBP3.7□□□□□ -1.82
VPS29YHR012W SNF11P38956 169 aa3.7□□□□□ -1.82
VPS29YHR012W YAR068WP39564 161 aa3.7□□□□□ -1.82
VPS29YHR012W SWM2P40342 146 aa3.7□□□□□ -1.82
VPS29YHR012W TDA4P47153 279 aa3.7□□□□□ -1.82
VPS29YHR012W BUL1P48524 976 aa3.7□□□□□ -1.82
VPS29YHR012W COX12Q01519 83 aa3.7□□□□□ -1.82
VPS29YHR012W ATG39Q06159 398 aa3.7□□□□□ -1.82
VPS29YHR012W YCT1Q12235 531 aa3.7□□□□□ -1.82
VPS29YHR012W YPS3Q12303 508 aa3.7□□□□□ -1.82
VPS29YHR012W ATG5Q12380 294 aa3.7□□□□□ -1.82
VPS29YHR012W PRM4Q12498 284 aa3.7□□□□□ -1.82
VPS29YHR012W PUT1P09368 476 aa3.69□□□□□ -1.82
VPS29YHR012W URA5P13298 226 aaKnown RBP3.69□□□□□ -1.82
VPS29YHR012W ZRC1P20107 442 aa3.69□□□□□ -1.82
VPS29YHR012W MAG1P22134 296 aaKnown RBP3.69□□□□□ -1.82
VPS29YHR012W JAC1P53193 184 aa3.69□□□□□ -1.82
VPS29YHR012W YGR050CP53231 118 aa3.69□□□□□ -1.82
VPS29YHR012W OCA2P53949 197 aa3.69□□□□□ -1.82
VPS29YHR012W DID2P69771 204 aa3.69□□□□□ -1.82
VPS29YHR012W NRG1Q03125 231 aa3.69□□□□□ -1.82
VPS29YHR012W SDH7Q04401 133 aa3.69□□□□□ -1.82
VPS29YHR012W DCS1Q06151 350 aa3.69□□□□□ -1.82
VPS29YHR012W RXT3Q07458 294 aa3.69□□□□□ -1.82
VPS29YHR012W LDS2Q08218 356 aa3.69□□□□□ -1.82
VPS29YHR012W TIM18Q08749 192 aa3.69□□□□□ -1.82
VPS29YHR012W FEX1Q08913 375 aa3.69□□□□□ -1.82
VPS29YHR012W FEX2Q08991 375 aa3.69□□□□□ -1.82
VPS29YHR012W PAA1Q12447 191 aaKnown RBP3.69□□□□□ -1.82
VPS29YHR012W YGL194C-AQ2V2P6 80 aa3.69□□□□□ -1.82
VPS29YHR012W YBR255C-AQ3E776 120 aa3.69□□□□□ -1.82
VPS29YHR012W POP5P28005 173 aa3.68□□□□□ -1.82
VPS29YHR012W SUA5P32579 426 aa3.68□□□□□ -1.82
VPS29YHR012W DFG10P40526 253 aa3.68□□□□□ -1.82
VPS29YHR012W RTS2P40962 232 aa3.68□□□□□ -1.82
VPS29YHR012W NIF3P53081 288 aa3.68□□□□□ -1.82
VPS29YHR012W DYN2Q02647 92 aa3.68□□□□□ -1.82
VPS29YHR012W YPL162CQ12042 273 aa3.68□□□□□ -1.82
VPS29YHR012W TFB5Q3E7C1 72 aaPredicted RBP3.68□□□□□ -1.82
VPS29YHR012W YBR085C-AO43137 85 aa3.67□□□□□ -1.82
VPS29YHR012W MRS3P10566 314 aa3.67□□□□□ -1.82
VPS29YHR012W CSH1P38287 376 aa3.67□□□□□ -1.82
VPS29YHR012W SIM1P40472 476 aa3.67□□□□□ -1.82
VPS29YHR012W UBC12P52491 188 aa3.67□□□□□ -1.82
VPS29YHR012W VPS28Q02767 242 aa3.67□□□□□ -1.82
VPS29YHR012W IZH3Q07959 543 aa3.67□□□□□ -1.82
VPS29YHR012W TAR1Q8TGM6 124 aa3.67□□□□□ -1.82
VPS29YHR012W UPS2P35200 230 aa3.66□□□□□ -1.82
VPS29YHR012W NRG2P38082 220 aa3.66□□□□□ -1.82
VPS29YHR012W YPC1P38298 316 aa3.66□□□□□ -1.82
VPS29YHR012W WSS1P38838 269 aa3.66□□□□□ -1.82
VPS29YHR012W HXT14P42833 540 aa3.66□□□□□ -1.82
VPS29YHR012W GPI2P46961 280 aa3.66□□□□□ -1.82
VPS29YHR012W TAD2P47058 250 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms