RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	NEJ1	Q06148	342 aa		3.05	□□□□□ -1.92
CMR3	YPR013C	RPL26A	P05743	127 aa	Known RBP	3.04	□□□□□ -1.92
CMR3	YPR013C	CPA1	P07258	411 aa	Known RBP	3.04	□□□□□ -1.92
CMR3	YPR013C	SNC2	P33328	115 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	PAN3	P36102	679 aa	Predicted RBP	3.04	□□□□□ -1.92
CMR3	YPR013C	UMP1	P38293	148 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	YAP3	P38749	330 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	XPT1	P47165	209 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	YGL101W	P53144	215 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	RPL26B	P53221	127 aa	Known RBP	3.04	□□□□□ -1.92
CMR3	YPR013C	DGK1	Q12382	290 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	YLR412C-A	Q3E742	68 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	ODC2	Q99297	307 aa		3.04	□□□□□ -1.92
CMR3	YPR013C	PBI2	P0CT04	75 aa	Known RBP	3.03	□□□□□ -1.92
CMR3	YPR013C	SLM6	P38343	150 aa		3.03	□□□□□ -1.92
CMR3	YPR013C	YHR180W	P38868	163 aa		3.03	□□□□□ -1.92
CMR3	YPR013C	FCY21	P40039	528 aa		3.03	□□□□□ -1.92
CMR3	YPR013C	YGR219W	P53307	113 aa		3.03	□□□□□ -1.92
CMR3	YPR013C	SPC2	Q04969	178 aa		3.03	□□□□□ -1.92
CMR3	YPR013C	YDL180W	Q12301	547 aa		3.03	□□□□□ -1.92
CMR3	YPR013C	MIG1	P27705	504 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	UBC8	P28263	218 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	KDX1	P36005	433 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	POP7	P38291	140 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	YBR285W	P38354	144 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	YFL019C	P43576	117 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	TTI2	P47168	421 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	SOL1	P50278	321 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	YPR202W	Q08993	238 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	YLR046C	Q12253	270 aa		3.02	□□□□□ -1.93
CMR3	YPR013C	YAR023C	D6VPM8	179 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	PEX34	P25584	144 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	VTC1	P40046	129 aa	RIP-Chip data	3.01	□□□□□ -1.93	not detected
CMR3	YPR013C	VPS71	Q03433	280 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	PKR1	Q03880	122 aa	Known RBP	3.01	□□□□□ -1.93
CMR3	YPR013C	THI74	Q04083	370 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	NAT3	Q06504	195 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	DAS2	Q12084	232 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	ATO3	Q12359	275 aa		3.01	□□□□□ -1.93
CMR3	YPR013C	UBI4	P0CG63	381 aa	Known RBP	3	□□□□□ -1.93
CMR3	YPR013C	EAF6	P47128	113 aa		3	□□□□□ -1.93
CMR3	YPR013C	YJR146W	P47174	117 aa		3	□□□□□ -1.93
CMR3	YPR013C	DOC1	P53068	250 aa		3	□□□□□ -1.93
CMR3	YPR013C	SLM2	P53955	656 aa		3	□□□□□ -1.93
CMR3	YPR013C	LSM3	P57743	89 aa	Known RBP	3	□□□□□ -1.93
CMR3	YPR013C	YMR099C	Q03161	297 aa	Known RBP	3	□□□□□ -1.93
CMR3	YPR013C	RDS3	Q06835	107 aa	Predicted RBP	3	□□□□□ -1.93
CMR3	YPR013C	POR1	P04840	283 aa	Known RBP	2.99	□□□□□ -1.93
CMR3	YPR013C	IDP1	P21954	428 aa	Known RBP	2.99	□□□□□ -1.93
CMR3	YPR013C	UPS2	P35200	230 aa		2.99	□□□□□ -1.93
CMR3	YPR013C	YET1	P35723	206 aa		2.99	□□□□□ -1.93
CMR3	YPR013C	CSH1	P38287	376 aa		2.99	□□□□□ -1.93
CMR3	YPR013C	APQ12	P40532	138 aa		2.99	□□□□□ -1.93
CMR3	YPR013C	RPL33B	P41056	107 aa	Known RBP	2.99	□□□□□ -1.93
CMR3	YPR013C	CIS3	P47001	227 aa		2.99	□□□□□ -1.93
CMR3	YPR013C	FSF1	Q12029	327 aa	Known RBP	2.99	□□□□□ -1.93
CMR3	YPR013C	YDL012C	Q12489	107 aa		2.99	□□□□□ -1.93
CMR3	YPR013C	YOR1	P53049	1477 aa		2.98	□□□□□ -1.93
CMR3	YPR013C	RPL2A	P0CX45	254 aa	Known RBP	2.98	□□□□□ -1.93
CMR3	YPR013C	RPL2B	P0CX46	254 aa	Known RBP	2.98	□□□□□ -1.93
CMR3	YPR013C	NUF2	P33895	451 aa		2.98	□□□□□ -1.93
CMR3	YPR013C	GIM4	P40005	111 aa	Known RBP	2.98	□□□□□ -1.93
CMR3	YPR013C	TIM13	P53299	105 aa		2.98	□□□□□ -1.93
CMR3	YPR013C	YNR062C	P53748	327 aa		2.98	□□□□□ -1.93
CMR3	YPR013C	RAV2	Q03956	351 aa		2.98	□□□□□ -1.93
CMR3	YPR013C	YPR096C	O13587	100 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	NSP1	P14907	823 aa	Known RBP	2.97	□□□□□ -1.93
CMR3	YPR013C	SDH4	P37298	181 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	IPI1	P38803	334 aa	Predicted RBP	2.97	□□□□□ -1.93
CMR3	YPR013C	SPO73	P40031	143 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	DLS1	P40366	167 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	HHT1	P61830	136 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	YMR295C	Q03559	197 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	MRPS8	Q03799	155 aa		2.97	□□□□□ -1.93
CMR3	YPR013C	ERV15	P38312	142 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	TIR3	P40552	269 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	ERJ5	P43613	295 aa	Predicted RBP	2.96	□□□□□ -1.94
CMR3	YPR013C	YJL144W	P47009	104 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	ORM1	P53224	222 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	YGR042W	P53227	271 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	YOR214C	Q12282	236 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	PRM7	Q12459	698 aa		2.96	□□□□□ -1.94
CMR3	YPR013C	TIR1	P10863	254 aa		2.95	□□□□□ -1.94
CMR3	YPR013C	CLB6	P32943	380 aa		2.95	□□□□□ -1.94
CMR3	YPR013C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
CMR3	YPR013C	NSA2	P40078	261 aa	Known RBP	2.95	□□□□□ -1.94
CMR3	YPR013C	YGL204C	P53089	101 aa		2.95	□□□□□ -1.94
CMR3	YPR013C	MPC3	P53311	146 aa		2.95	□□□□□ -1.94
CMR3	YPR013C	VPS68	Q12016	184 aa		2.95	□□□□□ -1.94
CMR3	YPR013C	FAB1	P34756	2278 aa		2.95	□□□□□ -1.94
CMR3	YPR013C	RPL30	P14120	105 aa	Known RBP	2.94	□□□□□ -1.94
CMR3	YPR013C	STP22	P25604	385 aa		2.94	□□□□□ -1.94
CMR3	YPR013C	CYC2	P38909	366 aa		2.94	□□□□□ -1.94
CMR3	YPR013C	YNL200C	P40165	246 aa	Known RBP	2.94	□□□□□ -1.94
CMR3	YPR013C	CUP9	P41817	306 aa		2.94	□□□□□ -1.94
CMR3	YPR013C	GLR1	P41921	483 aa	Known RBP	2.94	□□□□□ -1.94
CMR3	YPR013C	SBH1	P52870	82 aa		2.94	□□□□□ -1.94
CMR3	YPR013C	SHH3	Q04487	196 aa		2.94	□□□□□ -1.94
CMR3	YPR013C	PEX4	P29340	183 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	CPR5	P35176	225 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms