RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C YAP3P38749 330 aa2.12□□□□□ -2.07
SUB1YMR039C AVT2P39981 480 aa2.12□□□□□ -2.07
SUB1YMR039C YER134CP40081 178 aa2.12□□□□□ -2.07
SUB1YMR039C PGD1P40356 397 aa2.12□□□□□ -2.07
SUB1YMR039C GVP36P40531 326 aaKnown RBP2.12□□□□□ -2.07
SUB1YMR039C SER2P42941 309 aa2.12□□□□□ -2.07
SUB1YMR039C YJR111CP47148 283 aaKnown RBP2.12□□□□□ -2.07
SUB1YMR039C COS6P53344 381 aa2.12□□□□□ -2.07
SUB1YMR039C RCF2P53721 224 aa2.12□□□□□ -2.07
SUB1YMR039C TMA20P89886 181 aaPredicted RBP2.12□□□□□ -2.07
SUB1YMR039C YPR127WQ06494 345 aa2.12□□□□□ -2.07
SUB1YMR039C RFU1Q08003 200 aa2.12□□□□□ -2.07
SUB1YMR039C ODC2Q99297 307 aa2.12□□□□□ -2.07
SUB1YMR039C YOR1P53049 1477 aa2.12□□□□□ -2.07
SUB1YMR039C CPA1P07258 411 aaKnown RBP2.11□□□□□ -2.07
SUB1YMR039C RPS28BP0C0X0 67 aaKnown RBP2.11□□□□□ -2.07
SUB1YMR039C UBC8P28263 218 aa2.11□□□□□ -2.07
SUB1YMR039C OPY1P38271 328 aa2.11□□□□□ -2.07
SUB1YMR039C YBR285WP38354 144 aa2.11□□□□□ -2.07
SUB1YMR039C NSG1P38837 291 aa2.11□□□□□ -2.07
SUB1YMR039C CIN5P40917 295 aa2.11□□□□□ -2.07
SUB1YMR039C XPT1P47165 209 aa2.11□□□□□ -2.07
SUB1YMR039C YOR342CQ12182 319 aa2.11□□□□□ -2.07
SUB1YMR039C EFG1Q3E705 233 aaKnown RBP2.11□□□□□ -2.07
SUB1YMR039C YLR412C-AQ3E742 68 aa2.11□□□□□ -2.07
SUB1YMR039C RPS28AQ3E7X9 67 aaPredicted RBP2.11□□□□□ -2.07
SUB1YMR039C MDS3P53094 1487 aa2.11□□□□□ -2.07
SUB1YMR039C RAD50P12753 1312 aa2.11□□□□□ -2.07
SUB1YMR039C RPO41P13433 1351 aaKnown RBP2.1□□□□□ -2.07
SUB1YMR039C SKI3P17883 1432 aaKnown RBP2.1□□□□□ -2.07
SUB1YMR039C PET54P10834 293 aa2.1□□□□□ -2.07
SUB1YMR039C SPO13P23624 291 aa2.1□□□□□ -2.07
SUB1YMR039C PAN3P36102 679 aaPredicted RBP2.1□□□□□ -2.07
SUB1YMR039C YEA4P40004 342 aa2.1□□□□□ -2.07
SUB1YMR039C YER137CP40083 148 aaKnown RBP2.1□□□□□ -2.07
SUB1YMR039C RFC2P40348 353 aa2.1□□□□□ -2.07
SUB1YMR039C YGR219WP53307 113 aa2.1□□□□□ -2.07
SUB1YMR039C HSK3P69852 69 aa2.1□□□□□ -2.07
SUB1YMR039C YDR476CQ03362 224 aa2.1□□□□□ -2.07
SUB1YMR039C SHE2P36068 246 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SUB1YMR039C YHR180WP38868 163 aa2.09□□□□□ -2.07
SUB1YMR039C RPL33BP41056 107 aaKnown RBP2.09□□□□□ -2.07
SUB1YMR039C YGR201CP42936 225 aa2.09□□□□□ -2.07
SUB1YMR039C MOG1P47123 218 aa2.09□□□□□ -2.07
SUB1YMR039C DOC1P53068 250 aa2.09□□□□□ -2.07
SUB1YMR039C MPA43P53583 542 aaPredicted RBP2.09□□□□□ -2.07
SUB1YMR039C DAD3P69850 94 aa2.09□□□□□ -2.07
SUB1YMR039C YPD1Q07688 167 aa2.09□□□□□ -2.07
SUB1YMR039C DGK1Q12382 290 aa2.09□□□□□ -2.07
SUB1YMR039C YAR023CD6VPM8 179 aa2.08□□□□□ -2.08
SUB1YMR039C YCR023CP25351 611 aa2.08□□□□□ -2.08
SUB1YMR039C BUB2P26448 306 aaPredicted RBP2.08□□□□□ -2.08
SUB1YMR039C CLB6P32943 380 aa2.08□□□□□ -2.08
SUB1YMR039C UPS2P35200 230 aa2.08□□□□□ -2.08
SUB1YMR039C YET1P35723 206 aa2.08□□□□□ -2.08
SUB1YMR039C SLM6P38343 150 aa2.08□□□□□ -2.08
SUB1YMR039C CIS3P47001 227 aa2.08□□□□□ -2.08
SUB1YMR039C APS3P47064 194 aa2.08□□□□□ -2.08
SUB1YMR039C GPI14P47088 403 aaKnown RBP2.08□□□□□ -2.08
SUB1YMR039C SLM2P53955 656 aa2.08□□□□□ -2.08
SUB1YMR039C YDR274CP87283 123 aa2.08□□□□□ -2.08
SUB1YMR039C SPG3Q04398 127 aaPredicted RBP2.08□□□□□ -2.08
SUB1YMR039C FSF1Q12029 327 aaKnown RBP2.08□□□□□ -2.08
SUB1YMR039C YDL180WQ12301 547 aa2.08□□□□□ -2.08
SUB1YMR039C EMC6Q12431 108 aa2.08□□□□□ -2.08
SUB1YMR039C YML100W-AQ8TGT0 57 aa2.08□□□□□ -2.08
SUB1YMR039C PDR18P53756 1333 aa2.08□□□□□ -2.08
SUB1YMR039C FCY21P40039 528 aa2.07□□□□□ -2.08
SUB1YMR039C PHB1P40961 287 aa2.07□□□□□ -2.08
SUB1YMR039C TTI2P47168 421 aa2.07□□□□□ -2.08
SUB1YMR039C YJR146WP47174 117 aa2.07□□□□□ -2.08
SUB1YMR039C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SUB1YMR039C YOL014WQ08110 124 aa2.07□□□□□ -2.08
SUB1YMR039C ATO3Q12359 275 aa2.07□□□□□ -2.08
SUB1YMR039C YLR361C-AQ3E795 98 aa2.07□□□□□ -2.08
SUB1YMR039C TY1B-HO13535 1793 aa2.07□□□□□ -2.08
SUB1YMR039C YIL177CP40434 1758 aa2.07□□□□□ -2.08
SUB1YMR039C YJL225CP40889 1758 aa2.07□□□□□ -2.08
SUB1YMR039C TOP2P06786 1428 aaKnown RBP2.07□□□□□ -2.08
SUB1YMR039C TAF2P23255 1407 aa2.07□□□□□ -2.08
SUB1YMR039C PBI2P0CT04 75 aaKnown RBP2.06□□□□□ -2.08
SUB1YMR039C PEX4P29340 183 aa2.06□□□□□ -2.08
SUB1YMR039C VTC1P40046 129 aaRIP-Chip data2.06□□□□□ -2.08not detected
SUB1YMR039C YFL019CP43576 117 aa2.06□□□□□ -2.08
SUB1YMR039C VPS71Q03433 280 aa2.06□□□□□ -2.08
SUB1YMR039C MRPS8Q03799 155 aa2.06□□□□□ -2.08
SUB1YMR039C NAT3Q06504 195 aa2.06□□□□□ -2.08
SUB1YMR039C VPS68Q12016 184 aa2.06□□□□□ -2.08
SUB1YMR039C YLR046CQ12253 270 aa2.06□□□□□ -2.08
SUB1YMR039C SNT2P53127 1403 aa2.06□□□□□ -2.08
SUB1YMR039C NHP6AP11632 93 aaKnown RBP2.05□□□□□ -2.08
SUB1YMR039C IDP1P21954 428 aaKnown RBP2.05□□□□□ -2.08
SUB1YMR039C HSP30P25619 332 aa2.05□□□□□ -2.08
SUB1YMR039C UTP11P34247 250 aaPredicted RBP2.05□□□□□ -2.08
SUB1YMR039C SFK1P35735 353 aa2.05□□□□□ -2.08
SUB1YMR039C PHO88P38264 188 aaPredicted RBP2.05□□□□□ -2.08
SUB1YMR039C ERV15P38312 142 aa2.05□□□□□ -2.08
SUB1YMR039C SVP26P38869 228 aa2.05□□□□□ -2.08
SUB1YMR039C TIR3P40552 269 aa2.05□□□□□ -2.08
SUB1YMR039C YGL101WP53144 215 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms