RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W INA22P40576 216 aa-0.16□□□□□ -2.44
PRP39YML046W TOM7P53507 60 aa-0.16□□□□□ -2.44
PRP39YML046W YMR315WQ04869 349 aaKnown RBP-0.16□□□□□ -2.44
PRP39YML046W YLR194CQ05777 254 aa-0.16□□□□□ -2.44
PRP39YML046W YPR013CQ12145 317 aa-0.16□□□□□ -2.44
PRP39YML046W EFG1Q3E705 233 aaKnown RBP-0.16□□□□□ -2.44
PRP39YML046W PET494P07390 489 aaPredicted RBP-0.17□□□□□ -2.44
PRP39YML046W QCR8P08525 94 aa-0.17□□□□□ -2.44
PRP39YML046W RPL31AP0C2H8 113 aaKnown RBP-0.17□□□□□ -2.44
PRP39YML046W MET16P18408 261 aaPredicted RBP-0.17□□□□□ -2.44
PRP39YML046W EHD3P28817 500 aa-0.17□□□□□ -2.44
PRP39YML046W PRP18P33411 251 aaPredicted RBP-0.17□□□□□ -2.44
PRP39YML046W RPB7P34087 171 aa-0.17□□□□□ -2.44
PRP39YML046W HIS2P38635 335 aa-0.17□□□□□ -2.44
PRP39YML046W YER137CP40083 148 aaKnown RBP-0.17□□□□□ -2.44
PRP39YML046W YJL028WP47062 111 aa-0.17□□□□□ -2.44
PRP39YML046W KAP114P53067 1004 aa-0.17□□□□□ -2.44
PRP39YML046W EOS1P53938 366 aa-0.17□□□□□ -2.44
PRP39YML046W ASI3P53983 676 aa-0.17□□□□□ -2.44
PRP39YML046W UBC7Q02159 165 aa-0.17□□□□□ -2.44
PRP39YML046W YMR209CQ03648 457 aa-0.17□□□□□ -2.44
PRP39YML046W YML018CQ03730 393 aa-0.17□□□□□ -2.44
PRP39YML046W RRT7Q07829 113 aa-0.17□□□□□ -2.44
PRP39YML046W SDO1Q07953 250 aaKnown RBP-0.17□□□□□ -2.44
PRP39YML046W GRE1Q08969 168 aa-0.17□□□□□ -2.44
PRP39YML046W JIP3O13555 125 aa-0.18□□□□□ -2.44
PRP39YML046W YHR032W-AP0C5N6 59 aa-0.18□□□□□ -2.44
PRP39YML046W UBC5P15732 148 aa-0.18□□□□□ -2.44
PRP39YML046W CAM1P29547 415 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W YPT52P36018 234 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W OST2P46964 130 aa-0.18□□□□□ -2.44
PRP39YML046W YML6P51998 286 aa-0.18□□□□□ -2.44
PRP39YML046W PGA2P53903 129 aa-0.18□□□□□ -2.44
PRP39YML046W FYV6P53913 173 aa-0.18□□□□□ -2.44
PRP39YML046W YMR082CQ04276 118 aa-0.18□□□□□ -2.44
PRP39YML046W DPP1Q05521 289 aa-0.18□□□□□ -2.44
PRP39YML046W COA4Q05809 96 aa-0.18□□□□□ -2.44
PRP39YML046W SMD2Q06217 110 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W CUR1Q06469 252 aa-0.18□□□□□ -2.44
PRP39YML046W LDB18Q07887 179 aa-0.18□□□□□ -2.44
PRP39YML046W PGC1Q08959 321 aa-0.18□□□□□ -2.44
PRP39YML046W BBP1Q12365 385 aa-0.18□□□□□ -2.44
PRP39YML046W YCR075W-AQ3E830 75 aa-0.18□□□□□ -2.44
PRP39YML046W CDC28P00546 298 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W RPL30P14120 105 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W RPS0AP32905 252 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W YBR013CP38215 129 aa-0.18□□□□□ -2.44
PRP39YML046W POP4P38336 279 aa-0.18□□□□□ -2.44
PRP39YML046W YHR127WP38833 243 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W YER076CP40049 302 aa-0.18□□□□□ -2.44
PRP39YML046W ERV25P54837 211 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W SML1Q04964 104 aa-0.18□□□□□ -2.44
PRP39YML046W GGA1Q06336 557 aa-0.18□□□□□ -2.44
PRP39YML046W ABP140Q08641 628 aaKnown RBP-0.18□□□□□ -2.44
PRP39YML046W GIS3Q12418 502 aa-0.18□□□□□ -2.44
PRP39YML046W PSF1Q12488 208 aa-0.18□□□□□ -2.44
PRP39YML046W YLL066W-BQ8TGJ7 56 aa-0.18□□□□□ -2.44
PRP39YML046W YAL064W-BO13512 126 aa-0.19□□□□□ -2.44
PRP39YML046W RPL18AP0CX49 186 aaKnown RBP-0.19□□□□□ -2.44
PRP39YML046W RPL18BP0CX50 186 aaKnown RBP-0.19□□□□□ -2.44
PRP39YML046W RSR1P13856 272 aa-0.19□□□□□ -2.44
PRP39YML046W PBN1P25580 416 aa-0.19□□□□□ -2.44
PRP39YML046W SUA5P32579 426 aa-0.19□□□□□ -2.44
PRP39YML046W YNL194CP40169 301 aa-0.19□□□□□ -2.44
PRP39YML046W YJR056CP47115 236 aa-0.19□□□□□ -2.44
PRP39YML046W YGR219WP53307 113 aa-0.19□□□□□ -2.44
PRP39YML046W DBP6P53734 629 aaKnown RBP-0.19□□□□□ -2.44
PRP39YML046W ATC1Q04005 294 aa-0.19□□□□□ -2.44
PRP39YML046W ARO80Q04052 950 aa-0.19□□□□□ -2.44
PRP39YML046W PBP4Q07362 185 aaKnown RBP-0.19□□□□□ -2.44
PRP39YML046W RRS1Q08746 203 aaKnown RBP-0.19□□□□□ -2.44
PRP39YML046W YPL162CQ12042 273 aa-0.19□□□□□ -2.44
PRP39YML046W APC9Q12107 265 aa-0.19□□□□□ -2.44
PRP39YML046W YDR029WQ12111 104 aa-0.19□□□□□ -2.44
PRP39YML046W TAR1Q8TGM6 124 aa-0.19□□□□□ -2.44
PRP39YML046W YLR156WP0CE96 114 aa-0.2□□□□□ -2.44
PRP39YML046W YLR159WP0CE97 114 aa-0.2□□□□□ -2.44
PRP39YML046W YLR161WP0CE98 114 aa-0.2□□□□□ -2.44
PRP39YML046W DBP3P20447 523 aaKnown RBP-0.2□□□□□ -2.44
PRP39YML046W OAC1P32332 324 aa-0.2□□□□□ -2.44
PRP39YML046W VMA8P32610 256 aaKnown RBP-0.2□□□□□ -2.44
PRP39YML046W FES1P38260 290 aa-0.2□□□□□ -2.44
PRP39YML046W ERV15P38312 142 aa-0.2□□□□□ -2.44
PRP39YML046W YHL018WP38744 120 aaPredicted RBP-0.2□□□□□ -2.44
PRP39YML046W LIN1P38852 340 aaPredicted RBP-0.2□□□□□ -2.44
PRP39YML046W SEC28P40509 296 aaKnown RBP-0.2□□□□□ -2.44
PRP39YML046W YJL009WP47078 108 aa-0.2□□□□□ -2.44
PRP39YML046W YGL034CP53186 121 aa-0.2□□□□□ -2.44
PRP39YML046W VPS20Q04272 221 aa-0.2□□□□□ -2.44
PRP39YML046W COX20Q04935 205 aa-0.2□□□□□ -2.44
PRP39YML046W YLR126CQ12288 251 aa-0.2□□□□□ -2.44
PRP39YML046W EMP46Q12396 444 aa-0.2□□□□□ -2.44
PRP39YML046W RRP36Q12481 300 aaPredicted RBP-0.2□□□□□ -2.44
PRP39YML046W NBL1Q3E7Y6 73 aa-0.2□□□□□ -2.44
PRP39YML046W NCB2Q92317 146 aa-0.2□□□□□ -2.44
PRP39YML046W YAR023CD6VPM8 179 aa-0.2□□□□□ -2.44
PRP39YML046W UGX2P32772 223 aa-0.2□□□□□ -2.44
PRP39YML046W SPT4P32914 102 aaPredicted RBP-0.2□□□□□ -2.44
PRP39YML046W YBR096WP38256 230 aa-0.2□□□□□ -2.44
PRP39YML046W YHR180WP38868 163 aa-0.2□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms