RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C MET30P39014 640 aa4.77□□□□□ -1.65
VPS1YKR001C VHS2P40463 436 aa4.77□□□□□ -1.65
VPS1YKR001C AVT7P40501 490 aa4.77□□□□□ -1.65
VPS1YKR001C UBC9P50623 157 aaPredicted RBP4.77□□□□□ -1.65
VPS1YKR001C COF1Q03048 143 aaKnown RBP4.77□□□□□ -1.65
VPS1YKR001C YMR310CQ04867 317 aaPredicted RBP4.77□□□□□ -1.65
VPS1YKR001C PAU23Q07987 124 aa4.77□□□□□ -1.65
VPS1YKR001C YOR376WQ08900 122 aa4.77□□□□□ -1.65
VPS1YKR001C RPL7BQ12213 244 aaKnown RBP4.77□□□□□ -1.65
VPS1YKR001C PAU17Q12370 124 aa4.77□□□□□ -1.65
VPS1YKR001C MBF1O14467 151 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C SEC4P07560 215 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C ERG8P24521 451 aa4.76□□□□□ -1.65
VPS1YKR001C MIG1P27705 504 aa4.76□□□□□ -1.65
VPS1YKR001C YKL187CP34231 750 aa4.76□□□□□ -1.65
VPS1YKR001C TMA19P35691 167 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C ARN2P38724 620 aa4.76□□□□□ -1.65
VPS1YKR001C FLX1P40464 311 aa4.76□□□□□ -1.65
VPS1YKR001C RRT5P43607 289 aa4.76□□□□□ -1.65
VPS1YKR001C SBH1P52870 82 aa4.76□□□□□ -1.65
VPS1YKR001C SYF2P53277 215 aaPredicted RBP4.76□□□□□ -1.65
VPS1YKR001C YGR168CP53293 376 aa4.76□□□□□ -1.65
VPS1YKR001C YOL024WQ08172 172 aa4.76□□□□□ -1.65
VPS1YKR001C STT4P37297 1900 aa4.76□□□□□ -1.65
VPS1YKR001C RPS25BP0C0T4 108 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C TY2A-LR1P0C2J4 438 aa4.76□□□□□ -1.65
VPS1YKR001C YOL163WP0CF20 169 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-FP0CX61 438 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-GR2P0CX62 438 aa4.76□□□□□ -1.65
VPS1YKR001C HMRA1P0CY11 126 aa4.76□□□□□ -1.65
VPS1YKR001C YCR007CP25354 239 aa4.76□□□□□ -1.65
VPS1YKR001C RNQ1P25367 405 aa4.76□□□□□ -1.65
VPS1YKR001C TRX3P25372 127 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-CP25383 438 aa4.76□□□□□ -1.65
VPS1YKR001C YCR102CP25608 368 aa4.76□□□□□ -1.65
VPS1YKR001C PRE2P30656 287 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C GLC7P32598 312 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C SKN1P33336 771 aa4.76□□□□□ -1.65
VPS1YKR001C YHR177WP38867 453 aa4.76□□□□□ -1.65
VPS1YKR001C YIL059CP40520 121 aa4.76□□□□□ -1.65
VPS1YKR001C MOB2P43563 287 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-DR2Q03483 438 aa4.76□□□□□ -1.65
VPS1YKR001C NUP53Q03790 475 aa4.76□□□□□ -1.65
VPS1YKR001C COQ11Q05892 277 aa4.76□□□□□ -1.65
VPS1YKR001C ARC18Q05933 178 aaKnown RBP4.76□□□□□ -1.65
VPS1YKR001C LOA1Q06508 300 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-BQ12260 438 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-OR2Q12293 438 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-DR1Q12392 438 aa4.76□□□□□ -1.65
VPS1YKR001C TY2A-OR1Q12439 438 aa4.76□□□□□ -1.65
VPS1YKR001C RPS25AQ3E792 108 aaPredicted RBP4.76□□□□□ -1.65
VPS1YKR001C TY2A-DR3Q99303 438 aa4.76□□□□□ -1.65
VPS1YKR001C HSP26P15992 214 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
VPS1YKR001C LDB16P25587 256 aa4.75□□□□□ -1.65
VPS1YKR001C AIM26P32858 118 aa4.75□□□□□ -1.65
VPS1YKR001C CLB6P32943 380 aa4.75□□□□□ -1.65
VPS1YKR001C SOR1P35497 357 aaKnown RBP4.75□□□□□ -1.65
VPS1YKR001C PRM5P40476 318 aa4.75□□□□□ -1.65
VPS1YKR001C SMD3P43321 101 aaKnown RBP4.75□□□□□ -1.65
VPS1YKR001C YFL065CP43539 102 aa4.75□□□□□ -1.65
VPS1YKR001C SNO3P43544 222 aa4.75□□□□□ -1.65
VPS1YKR001C YIF1P53845 314 aaKnown RBP4.75□□□□□ -1.65
VPS1YKR001C CDC14Q00684 551 aa4.75□□□□□ -1.65
VPS1YKR001C FCF1Q05498 189 aaPredicted RBP4.75□□□□□ -1.65
VPS1YKR001C SOR2Q07786 357 aa4.75□□□□□ -1.65
VPS1YKR001C YPR203WQ08994 102 aa4.75□□□□□ -1.65
VPS1YKR001C YBL112CQ3E7Y4 105 aa4.75□□□□□ -1.65
VPS1YKR001C COX10P21592 462 aa4.75□□□□□ -1.65
VPS1YKR001C RFA2P26754 273 aaKnown RBP4.75□□□□□ -1.65
VPS1YKR001C TRR2P38816 342 aa4.75□□□□□ -1.65
VPS1YKR001C YJL193WP39542 402 aa4.75□□□□□ -1.65
VPS1YKR001C APQ12P40532 138 aa4.75□□□□□ -1.65
VPS1YKR001C PRY1P47032 299 aa4.75□□□□□ -1.65
VPS1YKR001C MRX11Q03079 207 aa4.75□□□□□ -1.65
VPS1YKR001C ERP1Q05359 219 aaKnown RBP4.75□□□□□ -1.65
VPS1YKR001C PRM3Q08931 133 aa4.75□□□□□ -1.65
VPS1YKR001C SAM35P14693 329 aa4.74□□□□□ -1.65
VPS1YKR001C YCR100CP25606 316 aa4.74□□□□□ -1.65
VPS1YKR001C YSC84P32793 468 aa4.74□□□□□ -1.65
VPS1YKR001C DLS1P40366 167 aa4.74□□□□□ -1.65
VPS1YKR001C UBX6P47049 396 aa4.74□□□□□ -1.65
VPS1YKR001C SCW11P53189 542 aa4.74□□□□□ -1.65
VPS1YKR001C YGR219WP53307 113 aa4.74□□□□□ -1.65
VPS1YKR001C YNL165WP53891 406 aa4.74□□□□□ -1.65
VPS1YKR001C YLR152CP54072 576 aa4.74□□□□□ -1.65
VPS1YKR001C YLR042CQ07990 161 aa4.74□□□□□ -1.65
VPS1YKR001C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
VPS1YKR001C COX5AP00424 153 aa4.73□□□□□ -1.65
VPS1YKR001C PBI2P0CT04 75 aaKnown RBP4.73□□□□□ -1.65
VPS1YKR001C GAR1P28007 205 aaKnown RBP4.73□□□□□ -1.65
VPS1YKR001C RIM1P32445 135 aaKnown RBP4.73□□□□□ -1.65
VPS1YKR001C COX13P32799 129 aa4.73□□□□□ -1.65
VPS1YKR001C YKL107WP34251 309 aa4.73□□□□□ -1.65
VPS1YKR001C TEM1P38987 245 aa4.73□□□□□ -1.65
VPS1YKR001C PFS2P42841 465 aaKnown RBP4.73□□□□□ -1.65
VPS1YKR001C MSY1P48527 492 aa4.73□□□□□ -1.65
VPS1YKR001C RIM8P53179 542 aa4.73□□□□□ -1.65
VPS1YKR001C SDC1Q03323 175 aa4.73□□□□□ -1.65
VPS1YKR001C TRS23Q03784 219 aa4.73□□□□□ -1.65
VPS1YKR001C EMI1Q04406 187 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms