Protein–RNA interactions for Protein: Q07990

YLR042C, Cell wall protein YLR042C, yeastyeast

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR042CQ07990 NSR1YGR159C 1245 nt15.05■□□□□ -0
YLR042CQ07990 YML009W-BYML009W-B 477 nt14.89□□□□□ -0.03
YLR042CQ07990 NOP1YDL014W 984 nt14.4□□□□□ -0.1
YLR042CQ07990 MDJ1YFL016C 1536 nt13.57□□□□□ -0.24
YLR042CQ07990 YKL036CYKL036C 393 nt13.02□□□□□ -0.33
YLR042CQ07990 SRX1YKL086W 384 nt12.57□□□□□ -0.4
YLR042CQ07990 YJL027CYJL027C 417 nt12.53□□□□□ -0.4
YLR042CQ07990 Q0297Q0297 156 nt12.52□□□□□ -0.41
YLR042CQ07990 DBP2YNL112W 1641 nt11.92□□□□□ -0.5
YLR042CQ07990 YCR051WYCR051W 669 nt11.87□□□□□ -0.51
YLR042CQ07990 SCS3YGL126W 1143 nt11.71□□□□□ -0.53
YLR042CQ07990 YBR190WYBR190W 312 nt11.68□□□□□ -0.54
YLR042CQ07990 TRN1tP(UGG)A 72 nt11.53□□□□□ -0.56
YLR042CQ07990 SUF9tP(UGG)F 72 nt11.53□□□□□ -0.56
YLR042CQ07990 SUF8tP(UGG)H 72 nt11.53□□□□□ -0.56
YLR042CQ07990 tP(UGG)LtP(UGG)L 72 nt11.53□□□□□ -0.56
YLR042CQ07990 SUF7tP(UGG)M 72 nt11.53□□□□□ -0.56
YLR042CQ07990 tP(UGG)N1tP(UGG)N1 72 nt11.53□□□□□ -0.56
YLR042CQ07990 tP(UGG)N2tP(UGG)N2 72 nt11.53□□□□□ -0.56
YLR042CQ07990 tP(UGG)O1tP(UGG)O1 72 nt11.53□□□□□ -0.56
YLR042CQ07990 SUF11tP(UGG)O2 72 nt11.53□□□□□ -0.56
YLR042CQ07990 RTC3YHR087W 336 nt11.37□□□□□ -0.59
YLR042CQ07990 SSA3YBL075C 1950 nt11.36□□□□□ -0.59
YLR042CQ07990 CCC1YLR220W 969 nt11.35□□□□□ -0.59
YLR042CQ07990 YOL085CYOL085C 342 nt11.27□□□□□ -0.61
YLR042CQ07990 RPP1BYDL130W 321 nt11.22□□□□□ -0.61
YLR042CQ07990 RVS167YDR388W 1449 nt11.18□□□□□ -0.62
YLR042CQ07990 PKP1YIL042C 1185 nt11.1□□□□□ -0.63
YLR042CQ07990 SCJ1YMR214W 1134 nt11.04□□□□□ -0.64
YLR042CQ07990 tP(UGG)O3tP(UGG)O3 72 nt10.8□□□□□ -0.68
YLR042CQ07990 PUT4YOR348C 1884 nt10.8□□□□□ -0.68
YLR042CQ07990 PET122YER153C 765 nt10.73□□□□□ -0.69
YLR042CQ07990 SHR5YOL110W 714 nt10.73□□□□□ -0.69
YLR042CQ07990 SCR1SCR1 522 nt10.57□□□□□ -0.72
YLR042CQ07990 URN1YPR152C 1398 nt10.56□□□□□ -0.72
YLR042CQ07990 ARE1YCR048W 1833 nt10.51□□□□□ -0.73
YLR042CQ07990 OPI9YLR338W 858 nt10.48□□□□□ -0.73
YLR042CQ07990 YDJ1YNL064C 1230 nt10.48□□□□□ -0.73
YLR042CQ07990 SAH1YER043C 1350 nt10.45□□□□□ -0.74
YLR042CQ07990 DEP1YAL013W 1218 nt10.44□□□□□ -0.74
YLR042CQ07990 POA1YBR022W 534 nt10.41□□□□□ -0.74
YLR042CQ07990 ATS1YAL020C 1002 nt10.39□□□□□ -0.75
YLR042CQ07990 YHR049C-AYHR049C-A 297 nt10.38□□□□□ -0.75
YLR042CQ07990 RPN10YHR200W 807 nt10.38□□□□□ -0.75
YLR042CQ07990 RRN5YLR141W 1092 nt10.38□□□□□ -0.75
YLR042CQ07990 YNL208WYNL208W 600 nt10.31□□□□□ -0.76
YLR042CQ07990 BSC6YOL137W 1494 nt10.25□□□□□ -0.77
YLR042CQ07990 GAR1YHR089C 618 nt10.24□□□□□ -0.77
YLR042CQ07990 YER088W-BYER088W-B 147 nt10.2□□□□□ -0.78
YLR042CQ07990 PUN1YLR414C 792 nt10.18□□□□□ -0.78
YLR042CQ07990 BUD23YCR047C 828 nt10.1□□□□□ -0.79
YLR042CQ07990 RSB1YOR049C 1065 nt10.1□□□□□ -0.79
YLR042CQ07990 PTC2YER089C 1395 nt10.07□□□□□ -0.8
YLR042CQ07990 YJR018WYJR018W 363 nt10.06□□□□□ -0.8
YLR042CQ07990 NAB2YGL122C 1578 nt10□□□□□ -0.81
YLR042CQ07990 SPT5YML010W 3192 nt9.99□□□□□ -0.81
YLR042CQ07990 TIR1YER011W 765 nt9.93□□□□□ -0.82
YLR042CQ07990 FPS1YLL043W 2010 nt9.9□□□□□ -0.82
YLR042CQ07990 NVJ2YPR091C 2313 nt9.89□□□□□ -0.83
YLR042CQ07990 SSA1YAL005C 1929 nt9.88□□□□□ -0.83
YLR042CQ07990 YJR120WYJR120W 351 nt9.85□□□□□ -0.83
YLR042CQ07990 FIS1YIL065C 468 nt9.84□□□□□ -0.83
YLR042CQ07990 DAL1YIR027C 1383 nt9.82□□□□□ -0.84
YLR042CQ07990 RPP2BYDR382W 333 nt9.81□□□□□ -0.84
YLR042CQ07990 PAC11YDR488C 1602 nt9.78□□□□□ -0.84
YLR042CQ07990 INM2YDR287W 879 nt9.75□□□□□ -0.85
YLR042CQ07990 SSA4YER103W 1929 nt9.74□□□□□ -0.85
YLR042CQ07990 FPR4YLR449W 1179 nt9.74□□□□□ -0.85
YLR042CQ07990 PHO4YFR034C 939 nt9.72□□□□□ -0.85
YLR042CQ07990 PST2YDR032C 597 nt9.67□□□□□ -0.86
YLR042CQ07990 MEP2YNL142W 1500 nt9.66□□□□□ -0.86
YLR042CQ07990 YPS1YLR120C 1710 nt9.63□□□□□ -0.87
YLR042CQ07990 SRB2YHR041C 633 nt9.61□□□□□ -0.87
YLR042CQ07990 YBL100CYBL100C 315 nt9.61□□□□□ -0.87
YLR042CQ07990 BDH2YAL061W 1254 nt9.56□□□□□ -0.88
YLR042CQ07990 YDR095CYDR095C 411 nt9.54□□□□□ -0.88
YLR042CQ07990 YHR165W-AYHR165W-A 312 nt9.52□□□□□ -0.89
YLR042CQ07990 YJL225CYJL225C 5277 nt9.48□□□□□ -0.89
YLR042CQ07990 FUN26YAL022C 1554 nt9.48□□□□□ -0.89
YLR042CQ07990 DCW1YKL046C 1350 nt9.48□□□□□ -0.89
YLR042CQ07990 BDF1YLR399C 2061 nt9.45□□□□□ -0.9
YLR042CQ07990 WWM1YFL010C 636 nt9.43□□□□□ -0.9
YLR042CQ07990 LSM3YLR438C-A 270 nt9.41□□□□□ -0.9
YLR042CQ07990 TRM9YML014W 840 nt9.41□□□□□ -0.9
YLR042CQ07990 ALF1YNL148C 765 nt9.4□□□□□ -0.9
YLR042CQ07990 RDN37-1RDN37-1 5354 nt9.39□□□□□ -0.91
YLR042CQ07990 RDN37-2RDN37-2 5354 nt9.39□□□□□ -0.91
YLR042CQ07990 EMI2YDR516C 1503 nt9.37□□□□□ -0.91
YLR042CQ07990 CCT6YDR188W 1641 nt9.36□□□□□ -0.91
YLR042CQ07990 YGR021WYGR021W 873 nt9.35□□□□□ -0.91
YLR042CQ07990 YMR090WYMR090W 684 nt9.35□□□□□ -0.91
YLR042CQ07990 RPP2AYOL039W 321 nt9.34□□□□□ -0.91
YLR042CQ07990 YFL021C-AYFL021C-A 855 nt9.33□□□□□ -0.92
YLR042CQ07990 SHU1YHL006C 453 nt9.33□□□□□ -0.92
YLR042CQ07990 PTP1YDL230W 1008 nt9.32□□□□□ -0.92
YLR042CQ07990 TAT1YBR069C 1860 nt9.31□□□□□ -0.92
YLR042CQ07990 YDL221WYDL221W 552 nt9.3□□□□□ -0.92
YLR042CQ07990 SUF2tP(AGG)C 72 nt9.3□□□□□ -0.92
YLR042CQ07990 SUF10tP(AGG)N 72 nt9.3□□□□□ -0.92
YLR042CQ07990 YBR220CYBR220C 1683 nt9.29□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms