RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	AIM20	P40451	204 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	MST27	P53176	234 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	SSU72	P53538	206 aa	Predicted RBP	3.4	□□□□□ -1.86
SAF1	YBR280C	FYV6	P53913	173 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	RCF1	Q03713	159 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	VBA1	Q04301	562 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	KEI1	Q06346	221 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	AGC1	Q12482	902 aa		3.4	□□□□□ -1.86
SAF1	YBR280C	CYC3	P06182	269 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	FMT1	P32785	401 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	DOG2	P38773	246 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	DOG1	P38774	246 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	IRC24	P40580	263 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	CAT5	P41735	233 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	TDA4	P47153	279 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	RAD28	Q12021	506 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	ATG31	Q12421	196 aa		3.4	□□□□□ -1.87
SAF1	YBR280C	CAP2	P13517	287 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	MIR1	P23641	311 aa	Known RBP	3.39	□□□□□ -1.87
SAF1	YBR280C	SEC66	P33754	206 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	GOS1	P38736	223 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	LSM12	P38828	187 aa	Known RBP	3.39	□□□□□ -1.87
SAF1	YBR280C	DFG10	P40526	253 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	CAF16	P43569	289 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	ARP3	P47117	449 aa	Known RBP	3.39	□□□□□ -1.87
SAF1	YBR280C	MIC26	P50087	233 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	NRG1	Q03125	231 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	SUS1	Q6WNK7	96 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	PET20	Q99373	253 aa		3.39	□□□□□ -1.87
SAF1	YBR280C	MRPL27	P36526	146 aa	Predicted RBP	3.38	□□□□□ -1.87
SAF1	YBR280C	CDS1	P38221	457 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	SNU13	P39990	126 aa	Known RBP	3.38	□□□□□ -1.87
SAF1	YBR280C	POR2	P40478	281 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	ARO8	P53090	500 aa	Known RBP	3.38	□□□□□ -1.87
SAF1	YBR280C	GIM3	P53900	129 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	RTT103	Q05543	409 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	RXT3	Q07458	294 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	SCP1	Q08873	200 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	COS8	P38723	381 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	IRC18	P47056	224 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	FMP42	Q04991	504 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	MCM21	Q06675	368 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	YGL258W-A	Q3E740	77 aa		3.38	□□□□□ -1.87
SAF1	YBR280C	GPM1	P00950	247 aa	Known RBP	3.37	□□□□□ -1.87
SAF1	YBR280C	ECM25	P32525	599 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	RRT1	P38192	103 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	OCA2	P53949	197 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	DYN2	Q02647	92 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	TY1A-DR2	Q03964	440 aa	Known RBP	3.37	□□□□□ -1.87
SAF1	YBR280C	THI74	Q04083	370 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	SYM1	Q06563	197 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	TIM18	Q08749	192 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	FEX1	Q08913	375 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	FEX2	Q08991	375 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	YOR283W	Q12040	230 aa	Known RBP	3.37	□□□□□ -1.87
SAF1	YBR280C	ATG5	Q12380	294 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	PRM4	Q12498	284 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	YBR255C-A	Q3E776	120 aa		3.37	□□□□□ -1.87
SAF1	YBR280C	GPX2	P38143	162 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	POP8	P38208	133 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	GAT4	P40569	121 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	HAL1	Q01766	294 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	TY1A-MR1	Q04215	440 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	PAM18	Q07914	168 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	PEX27	Q08580	376 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	YOR352W	Q08816	343 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	FMP23	P38231	175 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	LAG1	P38703	411 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	YHR122W	P38829	231 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	RBL2	P48606	106 aa	Known RBP	3.36	□□□□□ -1.87
SAF1	YBR280C	EST3	Q03096	181 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	MGR3	Q04472	501 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	YOR011W-A	Q3E807	68 aa		3.36	□□□□□ -1.87
SAF1	YBR280C	URA5	P13298	226 aa	Known RBP	3.35	□□□□□ -1.87
SAF1	YBR280C	CPR4	P25334	318 aa		3.35	□□□□□ -1.87
SAF1	YBR280C	UPS2	P35200	230 aa		3.35	□□□□□ -1.87
SAF1	YBR280C	PAN3	P36102	679 aa	Predicted RBP	3.35	□□□□□ -1.87
SAF1	YBR280C	YBL071C	P38185	102 aa		3.35	□□□□□ -1.87
SAF1	YBR280C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
SAF1	YBR280C	SNF11	P38956	169 aa		3.35	□□□□□ -1.87
SAF1	YBR280C	NSA2	P40078	261 aa	Known RBP	3.35	□□□□□ -1.87
SAF1	YBR280C	NUP42	P49686	430 aa	Known RBP	3.35	□□□□□ -1.87
SAF1	YBR280C	CPR8	P53728	308 aa		3.35	□□□□□ -1.87
SAF1	YBR280C	PAA1	Q12447	191 aa	Known RBP	3.35	□□□□□ -1.87
SAF1	YBR280C	PRE9	P23638	258 aa	Known RBP	3.34	□□□□□ -1.87
SAF1	YBR280C	PUP1	P25043	261 aa		3.34	□□□□□ -1.87
SAF1	YBR280C	SIP1	P32578	815 aa		3.34	□□□□□ -1.87
SAF1	YBR280C	MIT1	P40002	666 aa		3.34	□□□□□ -1.87
SAF1	YBR280C	MSO1	P53604	210 aa	Known RBP	3.34	□□□□□ -1.87
SAF1	YBR280C	STP4	Q07351	490 aa		3.34	□□□□□ -1.87
SAF1	YBR280C	LDS2	Q08218	356 aa		3.34	□□□□□ -1.87
SAF1	YBR280C	BOL3	P39724	118 aa		3.34	□□□□□ -1.88
SAF1	YBR280C	HPA3	P39979	161 aa		3.34	□□□□□ -1.88
SAF1	YBR280C	RTS2	P40962	232 aa		3.34	□□□□□ -1.88
SAF1	YBR280C	YJL027C	P47063	138 aa	Predicted RBP	3.34	□□□□□ -1.88
SAF1	YBR280C	YAP1802	P53309	568 aa		3.34	□□□□□ -1.88
SAF1	YBR280C	TMA20	P89886	181 aa	Predicted RBP	3.34	□□□□□ -1.88
SAF1	YBR280C	MSH5	Q12175	901 aa		3.34	□□□□□ -1.88
SAF1	YBR280C	AVT5	P38176	459 aa		3.33	□□□□□ -1.88
SAF1	YBR280C	ERV15	P38312	142 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms