RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	NOP16	P40007	231 aa	Known RBP	6.48	□□□□□ -1.37
TGA1	tA(UGC)A	MSE1	P48525	536 aa		6.48	□□□□□ -1.37
TGA1	tA(UGC)A	IMD3	P50095	523 aa	Known RBP	6.48	□□□□□ -1.37
TGA1	tA(UGC)A	GTF1	P53260	183 aa	Predicted RBP	6.48	□□□□□ -1.37
TGA1	tA(UGC)A	ENV7	Q12003	364 aa		6.48	□□□□□ -1.37
TGA1	tA(UGC)A	GPM1	P00950	247 aa	Known RBP	6.47	□□□□□ -1.37
TGA1	tA(UGC)A	NHP6B	P11633	99 aa	Known RBP	6.47	□□□□□ -1.37
TGA1	tA(UGC)A	HRD1	Q08109	551 aa		6.47	□□□□□ -1.37
TGA1	tA(UGC)A	AEP3	Q12089	606 aa		6.47	□□□□□ -1.37
TGA1	tA(UGC)A	JID1	Q12350	301 aa		6.47	□□□□□ -1.37
TGA1	tA(UGC)A	HTZ1	Q12692	134 aa	Known RBP	6.47	□□□□□ -1.37
TGA1	tA(UGC)A	VPS63	O13549	108 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	CAP2	P13517	287 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	FEN2	P25621	512 aa	Known RBP	6.46	□□□□□ -1.38
TGA1	tA(UGC)A	PAN3	P36102	679 aa	Predicted RBP	6.46	□□□□□ -1.38
TGA1	tA(UGC)A	PHM8	P40025	321 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	GPP2	P40106	250 aa	Known RBP	6.46	□□□□□ -1.38
TGA1	tA(UGC)A	YJL163C	P46996	555 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	NIF3	P53081	288 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	GIM3	P53900	129 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	MRPL13	Q02204	264 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	RTT103	Q05543	409 aa		6.46	□□□□□ -1.38
TGA1	tA(UGC)A	MRPL23	Q12487	163 aa	Predicted RBP	6.46	□□□□□ -1.38
TGA1	tA(UGC)A	YCR016W	P25617	290 aa	Known RBP	6.45	□□□□□ -1.38
TGA1	tA(UGC)A	VMA8	P32610	256 aa	Known RBP	6.45	□□□□□ -1.38
TGA1	tA(UGC)A	RAD23	P32628	398 aa	Known RBP	6.45	□□□□□ -1.38
TGA1	tA(UGC)A	PRS4	P38063	326 aa	Predicted RBP	6.45	□□□□□ -1.38
TGA1	tA(UGC)A	YKE4	P40544	346 aa		6.45	□□□□□ -1.38
TGA1	tA(UGC)A	RPA43	P46669	326 aa		6.45	□□□□□ -1.38
TGA1	tA(UGC)A	PUS4	P48567	403 aa	Known RBP	6.45	□□□□□ -1.38
TGA1	tA(UGC)A	UBP8	P50102	471 aa		6.45	□□□□□ -1.38
TGA1	tA(UGC)A	ARO8	P53090	500 aa	Known RBP	6.45	□□□□□ -1.38
TGA1	tA(UGC)A	CRH1	P53301	507 aa		6.45	□□□□□ -1.38
TGA1	tA(UGC)A	VPS71	Q03433	280 aa		6.45	□□□□□ -1.38
TGA1	tA(UGC)A	YBR255C-A	Q3E776	120 aa		6.45	□□□□□ -1.38
TGA1	tA(UGC)A	QCR2	P07257	368 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	SRY1	P36007	326 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	VPS55	P47111	140 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	MRPS16	Q02608	121 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	CAB5	Q03941	241 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	YFH1	Q07540	174 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	YOL029C	Q08187	201 aa		6.44	□□□□□ -1.38
TGA1	tA(UGC)A	SPS2	P08459	502 aa		6.43	□□□□□ -1.38
TGA1	tA(UGC)A	STF2	P16965	84 aa		6.43	□□□□□ -1.38
TGA1	tA(UGC)A	MSN1	P22148	382 aa		6.43	□□□□□ -1.38
TGA1	tA(UGC)A	RNA14	P25298	677 aa	Known RBP	6.43	□□□□□ -1.38
TGA1	tA(UGC)A	YHR138C	P38841	114 aa	Predicted RBP	6.43	□□□□□ -1.38
TGA1	tA(UGC)A	MEH1	Q02205	184 aa		6.43	□□□□□ -1.38
TGA1	tA(UGC)A	HOR7	Q05827	59 aa		6.43	□□□□□ -1.38
TGA1	tA(UGC)A	HTB1	P02293	131 aa	Known RBP	6.42	□□□□□ -1.38
TGA1	tA(UGC)A	ARG80	P07249	177 aa		6.42	□□□□□ -1.38
TGA1	tA(UGC)A	PUT1	P09368	476 aa		6.42	□□□□□ -1.38
TGA1	tA(UGC)A	MRPL3	P36516	390 aa		6.42	□□□□□ -1.38
TGA1	tA(UGC)A	ATP3	P38077	311 aa	Known RBP	6.42	□□□□□ -1.38
TGA1	tA(UGC)A	LAG1	P38703	411 aa		6.42	□□□□□ -1.38
TGA1	tA(UGC)A	IRC24	P40580	263 aa		6.42	□□□□□ -1.38
TGA1	tA(UGC)A	ARP3	P47117	449 aa	Known RBP	6.42	□□□□□ -1.38
TGA1	tA(UGC)A	SOD1	P00445	154 aa	Known RBP	6.41	□□□□□ -1.38
TGA1	tA(UGC)A	DFG10	P40526	253 aa		6.41	□□□□□ -1.38
TGA1	tA(UGC)A	GPG1	P53130	126 aa		6.41	□□□□□ -1.38
TGA1	tA(UGC)A	PEX10	Q05568	337 aa		6.41	□□□□□ -1.38
TGA1	tA(UGC)A	PBP4	Q07362	185 aa	Known RBP	6.41	□□□□□ -1.38
TGA1	tA(UGC)A	TRM13	Q12383	476 aa		6.41	□□□□□ -1.38
TGA1	tA(UGC)A	HBN1	Q96VH4	193 aa		6.41	□□□□□ -1.38
TGA1	tA(UGC)A	COS8	P38723	381 aa		6.4	□□□□□ -1.38
TGA1	tA(UGC)A	FEX2	Q08991	375 aa		6.4	□□□□□ -1.38
TGA1	tA(UGC)A	RKI1	Q12189	258 aa		6.4	□□□□□ -1.38
TGA1	tA(UGC)A	YCT1	Q12235	531 aa		6.4	□□□□□ -1.38
TGA1	tA(UGC)A	ATG5	Q12380	294 aa		6.4	□□□□□ -1.38
TGA1	tA(UGC)A	RDI1	Q12434	202 aa		6.4	□□□□□ -1.38
TGA1	tA(UGC)A	TPI1	P00942	248 aa	Known RBP	6.39	□□□□□ -1.39
TGA1	tA(UGC)A	NOP1	P15646	327 aa	Known RBP	6.39	□□□□□ -1.39
TGA1	tA(UGC)A	RPD3	P32561	433 aa		6.39	□□□□□ -1.39
TGA1	tA(UGC)A	YPC1	P38298	316 aa		6.39	□□□□□ -1.39
TGA1	tA(UGC)A	YBR242W	P38331	238 aa		6.39	□□□□□ -1.39
TGA1	tA(UGC)A	YGR219W	P53307	113 aa		6.39	□□□□□ -1.39
TGA1	tA(UGC)A	HED1	Q03937	162 aa		6.39	□□□□□ -1.39
TGA1	tA(UGC)A	FSH2	Q05015	223 aa		6.39	□□□□□ -1.39
TGA1	tA(UGC)A	YHR212W-A	P0CX91	67 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	MRP17	P28778	131 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	ERV15	P38312	142 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	GEP4	P38812	185 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.38	□□□□□ -1.39	not detected
TGA1	tA(UGC)A	LST8	P41318	303 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	ERG25	P53045	309 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	YHP1	Q04116	353 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	YNG1	Q08465	219 aa		6.38	□□□□□ -1.39
TGA1	tA(UGC)A	MRS4	P23500	304 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	MIG1	P27705	504 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	COX15	P40086	486 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	RFC2	P40348	353 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	YJR012C	P47087	207 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	YGR050C	P53231	118 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	COX18	P53239	316 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	MSO1	P53604	210 aa	Known RBP	6.37	□□□□□ -1.39
TGA1	tA(UGC)A	FEX1	Q08913	375 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	YGL258W-A	Q3E740	77 aa		6.37	□□□□□ -1.39
TGA1	tA(UGC)A	YPS1	P32329	569 aa		6.36	□□□□□ -1.39
TGA1	tA(UGC)A	SUA5	P32579	426 aa		6.36	□□□□□ -1.39
TGA1	tA(UGC)A	UTR5	P32630	166 aa		6.36	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 1063.2 ms