RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W RPS18AP0CX55 146 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W RPS18BP0CX56 146 aaPredicted RBP3.86□□□□□ -1.79
VPS29YHR012W CKA1P15790 372 aa3.86□□□□□ -1.79
VPS29YHR012W RFA1P22336 621 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W SPT14P32363 452 aa3.86□□□□□ -1.79
VPS29YHR012W VMA8P32610 256 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W UTR5P32630 166 aa3.86□□□□□ -1.79
VPS29YHR012W REC104P33323 182 aa3.86□□□□□ -1.79
VPS29YHR012W RPB7P34087 171 aa3.86□□□□□ -1.79
VPS29YHR012W SDH4P37298 181 aa3.86□□□□□ -1.79
VPS29YHR012W IPI1P38803 334 aaPredicted RBP3.86□□□□□ -1.79
VPS29YHR012W GEP4P38812 185 aa3.86□□□□□ -1.79
VPS29YHR012W MIT1P40002 666 aa3.86□□□□□ -1.79
VPS29YHR012W YJR011CP47086 261 aaPredicted RBP3.86□□□□□ -1.79
VPS29YHR012W DIE2P50076 525 aa3.86□□□□□ -1.79
VPS29YHR012W ARO8P53090 500 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W DUO1P53168 247 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W RSM27P53305 110 aa3.86□□□□□ -1.79
VPS29YHR012W YNL234WP53857 426 aa3.86□□□□□ -1.79
VPS29YHR012W LRS4Q04087 347 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W YLR281CQ05863 155 aa3.86□□□□□ -1.79
VPS29YHR012W RGC1Q06108 1083 aaKnown RBP3.86□□□□□ -1.79
VPS29YHR012W PEX27Q08580 376 aa3.86□□□□□ -1.79
VPS29YHR012W TIR4Q12218 487 aaPredicted RBP3.86□□□□□ -1.79
VPS29YHR012W YOR192C-CQ3E736 78 aa3.86□□□□□ -1.79
VPS29YHR012W YLR365WQ7LIF2 110 aa3.86□□□□□ -1.79
VPS29YHR012W AAC1P04710 309 aa3.85□□□□□ -1.79
VPS29YHR012W RPL9AP05738 191 aaKnown RBP3.85□□□□□ -1.79
VPS29YHR012W CAP2P13517 287 aa3.85□□□□□ -1.79
VPS29YHR012W YMR31P19955 123 aa3.85□□□□□ -1.79
VPS29YHR012W HYM1P32464 399 aa3.85□□□□□ -1.79
VPS29YHR012W FLO10P36170 1169 aa3.85□□□□□ -1.79
VPS29YHR012W MBA1P38300 278 aa3.85□□□□□ -1.79
VPS29YHR012W YHR138CP38841 114 aaPredicted RBP3.85□□□□□ -1.79
VPS29YHR012W MSE1P48525 536 aa3.85□□□□□ -1.79
VPS29YHR012W VHT1P53241 593 aa3.85□□□□□ -1.79
VPS29YHR012W ALG9P53868 555 aaKnown RBP3.85□□□□□ -1.79
VPS29YHR012W BUD25P85052 153 aa3.85□□□□□ -1.79
VPS29YHR012W HRD1Q08109 551 aa3.85□□□□□ -1.79
VPS29YHR012W YOR292CQ08743 309 aa3.85□□□□□ -1.79
VPS29YHR012W YLR125WQ12138 136 aa3.85□□□□□ -1.79
VPS29YHR012W LAS17Q12446 633 aa3.85□□□□□ -1.79
VPS29YHR012W SUS1Q6WNK7 96 aa3.85□□□□□ -1.79
VPS29YHR012W HBN1Q96VH4 193 aa3.85□□□□□ -1.79
VPS29YHR012W URA3P03962 267 aa3.84□□□□□ -1.79
VPS29YHR012W YLL053CP0CD98 152 aa3.84□□□□□ -1.79
VPS29YHR012W PCL7P40186 285 aa3.84□□□□□ -1.79
VPS29YHR012W ATG18P43601 500 aa3.84□□□□□ -1.79
VPS29YHR012W RPA34P47006 233 aaPredicted RBP3.84□□□□□ -1.79
VPS29YHR012W IRC18P47056 224 aa3.84□□□□□ -1.79
VPS29YHR012W YJR012CP47087 207 aa3.84□□□□□ -1.79
VPS29YHR012W ECM27P47144 725 aa3.84□□□□□ -1.79
VPS29YHR012W MEH1Q02205 184 aa3.84□□□□□ -1.79
VPS29YHR012W YFH1Q07540 174 aa3.84□□□□□ -1.79
VPS29YHR012W YOL029CQ08187 201 aa3.84□□□□□ -1.79
VPS29YHR012W YPL199CQ08954 240 aa3.84□□□□□ -1.79
VPS29YHR012W YPR108W-AQ3E7B3 70 aa3.84□□□□□ -1.79
VPS29YHR012W ROX3P25046 220 aa3.83□□□□□ -1.8
VPS29YHR012W GET2P40056 285 aa3.83□□□□□ -1.8
VPS29YHR012W GPP2P40106 250 aaKnown RBP3.83□□□□□ -1.8
VPS29YHR012W YIL060WP40519 144 aa3.83□□□□□ -1.8
VPS29YHR012W YJL163CP46996 555 aa3.83□□□□□ -1.8
VPS29YHR012W TOS8P53147 276 aa3.83□□□□□ -1.8
VPS29YHR012W YHP1Q04116 353 aa3.83□□□□□ -1.8
VPS29YHR012W ASM4Q05166 528 aa3.83□□□□□ -1.8
VPS29YHR012W MCH1Q07376 486 aa3.83□□□□□ -1.8
VPS29YHR012W MED4Q12343 284 aa3.83□□□□□ -1.8
VPS29YHR012W VPS63O13549 108 aa3.82□□□□□ -1.8
VPS29YHR012W HOM6P31116 359 aaKnown RBP3.82□□□□□ -1.8
VPS29YHR012W YPT53P36019 220 aa3.82□□□□□ -1.8
VPS29YHR012W LAG1P38703 411 aa3.82□□□□□ -1.8
VPS29YHR012W FLO5P38894 1075 aa3.82□□□□□ -1.8
VPS29YHR012W COX15P40086 486 aa3.82□□□□□ -1.8
VPS29YHR012W YKE4P40544 346 aa3.82□□□□□ -1.8
VPS29YHR012W TPN1P53099 579 aa3.82□□□□□ -1.8
VPS29YHR012W ERV29P53337 310 aa3.82□□□□□ -1.8
VPS29YHR012W CWC25P53854 179 aaKnown RBP3.82□□□□□ -1.8
VPS29YHR012W MRPL22P53881 309 aa3.82□□□□□ -1.8
VPS29YHR012W VBA1Q04301 562 aa3.82□□□□□ -1.8
VPS29YHR012W YOL118CQ08259 102 aa3.82□□□□□ -1.8
VPS29YHR012W GEP3Q08622 556 aa3.82□□□□□ -1.8
VPS29YHR012W ATG41Q12048 136 aa3.82□□□□□ -1.8
VPS29YHR012W RKI1Q12189 258 aa3.82□□□□□ -1.8
VPS29YHR012W SCM3Q12334 223 aa3.82□□□□□ -1.8
VPS29YHR012W UBA3Q99344 299 aa3.82□□□□□ -1.8
VPS29YHR012W CYC1P00044 109 aaPredicted RBP3.81□□□□□ -1.8
VPS29YHR012W HTB1P02293 131 aaKnown RBP3.81□□□□□ -1.8
VPS29YHR012W VMA22P38784 181 aa3.81□□□□□ -1.8
VPS29YHR012W MPC2P38857 129 aa3.81□□□□□ -1.8
VPS29YHR012W POP2P39008 433 aa3.81□□□□□ -1.8
VPS29YHR012W YNL194CP40169 301 aa3.81□□□□□ -1.8
VPS29YHR012W MRPL49P40858 161 aaPredicted RBP3.81□□□□□ -1.8
VPS29YHR012W YGR042WP53227 271 aa3.81□□□□□ -1.8
VPS29YHR012W LSM7P53905 115 aaKnown RBP3.81□□□□□ -1.8
VPS29YHR012W YML018CQ03730 393 aa3.81□□□□□ -1.8
VPS29YHR012W CAB5Q03941 241 aa3.81□□□□□ -1.8
VPS29YHR012W ORM2Q06144 216 aa3.81□□□□□ -1.8
VPS29YHR012W PHO92Q06390 306 aa3.81□□□□□ -1.8
VPS29YHR012W MRPL35Q06678 367 aa3.81□□□□□ -1.8
VPS29YHR012W YLR031WQ07978 186 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms