RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W LSB5P25369 354 aa5.68□□□□□ -1.5
PDA1YER178W MRPL3P36516 390 aa5.68□□□□□ -1.5
PDA1YER178W COS8P38723 381 aa5.68□□□□□ -1.5
PDA1YER178W BOL3P39724 118 aa5.68□□□□□ -1.5
PDA1YER178W YJR056CP47115 236 aa5.68□□□□□ -1.5
PDA1YER178W RPA14P50106 137 aa5.68□□□□□ -1.5
PDA1YER178W SMX3P54999 86 aaPredicted RBP5.68□□□□□ -1.5
PDA1YER178W CAB5Q03941 241 aa5.68□□□□□ -1.5
PDA1YER178W ATG5Q12380 294 aa5.68□□□□□ -1.5
PDA1YER178W PUT1P09368 476 aa5.67□□□□□ -1.5
PDA1YER178W GRX2P17695 143 aaKnown RBP5.67□□□□□ -1.5
PDA1YER178W PPQ1P32945 549 aa5.67□□□□□ -1.5
PDA1YER178W BMT5P40493 336 aa5.67□□□□□ -1.5
PDA1YER178W MRPL13Q02204 264 aa5.67□□□□□ -1.5
PDA1YER178W YPL108WQ02872 168 aaPredicted RBP5.67□□□□□ -1.5
PDA1YER178W YML122CQ03207 126 aa5.67□□□□□ -1.5
PDA1YER178W YPD1Q07688 167 aa5.67□□□□□ -1.5
PDA1YER178W SRL1Q08673 210 aa5.67□□□□□ -1.5
PDA1YER178W QCR2P07257 368 aa5.66□□□□□ -1.5
PDA1YER178W SEC66P33754 206 aa5.66□□□□□ -1.5
PDA1YER178W YGR210CP42942 411 aa5.66□□□□□ -1.5
PDA1YER178W TAX4P47030 604 aa5.66□□□□□ -1.5
PDA1YER178W GPG1P53130 126 aa5.66□□□□□ -1.5
PDA1YER178W NGL2Q03264 515 aaKnown RBP5.66□□□□□ -1.5
PDA1YER178W LPP1Q04396 274 aa5.66□□□□□ -1.5
PDA1YER178W RPL9AP05738 191 aaKnown RBP5.65□□□□□ -1.5
PDA1YER178W BGL2P15703 313 aaKnown RBP5.65□□□□□ -1.5
PDA1YER178W YMR31P19955 123 aa5.65□□□□□ -1.5
PDA1YER178W YCR061WP25639 631 aa5.65□□□□□ -1.5
PDA1YER178W MRP17P28778 131 aa5.65□□□□□ -1.5
PDA1YER178W BFR1P38934 470 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
PDA1YER178W DFG10P40526 253 aa5.65□□□□□ -1.5
PDA1YER178W FIP1P45976 327 aa5.65□□□□□ -1.5
PDA1YER178W YFH1Q07540 174 aa5.65□□□□□ -1.5
PDA1YER178W YNK1P36010 153 aaKnown RBP5.64□□□□□ -1.51
PDA1YER178W RFC2P40348 353 aa5.64□□□□□ -1.51
PDA1YER178W RPS0BP46654 252 aaKnown RBP5.64□□□□□ -1.51
PDA1YER178W ARP3P47117 449 aaKnown RBP5.64□□□□□ -1.51
PDA1YER178W VPS28Q02767 242 aa5.64□□□□□ -1.51
PDA1YER178W JID1Q12350 301 aa5.64□□□□□ -1.51
PDA1YER178W TRM13Q12383 476 aa5.64□□□□□ -1.51
PDA1YER178W LAS17Q12446 633 aa5.64□□□□□ -1.51
PDA1YER178W ARG80P07249 177 aa5.63□□□□□ -1.51
PDA1YER178W CKS1P20486 150 aaKnown RBP5.63□□□□□ -1.51
PDA1YER178W TOM40P23644 387 aaKnown RBP5.63□□□□□ -1.51
PDA1YER178W COQ2P32378 372 aa5.63□□□□□ -1.51
PDA1YER178W AGE2P40529 298 aa5.63□□□□□ -1.51
PDA1YER178W RPL9BP51401 191 aaKnown RBP5.63□□□□□ -1.51
PDA1YER178W GIM3P53900 129 aa5.63□□□□□ -1.51
PDA1YER178W SOD1P00445 154 aaKnown RBP5.62□□□□□ -1.51
PDA1YER178W HEM13P11353 328 aaKnown RBP5.62□□□□□ -1.51
PDA1YER178W OLE1P21147 510 aaKnown RBP5.62□□□□□ -1.51
PDA1YER178W SEC22P22214 214 aa5.62□□□□□ -1.51
PDA1YER178W TIP1P27654 210 aaPredicted RBP5.62□□□□□ -1.51
PDA1YER178W SUA7P29055 345 aaPredicted RBP5.62□□□□□ -1.51
PDA1YER178W DAL3P32459 195 aa5.62□□□□□ -1.51
PDA1YER178W TCA17P32613 152 aa5.62□□□□□ -1.51
PDA1YER178W PSD1P39006 500 aa5.62□□□□□ -1.51
PDA1YER178W IRC24P40580 263 aa5.62□□□□□ -1.51
PDA1YER178W YJR012CP47087 207 aa5.62□□□□□ -1.51
PDA1YER178W BNA1P47096 177 aa5.62□□□□□ -1.51
PDA1YER178W MEH1Q02205 184 aa5.62□□□□□ -1.51
PDA1YER178W HRD1Q08109 551 aa5.62□□□□□ -1.51
PDA1YER178W YCT1Q12235 531 aa5.62□□□□□ -1.51
PDA1YER178W COA2Q3E823 68 aa5.62□□□□□ -1.51
PDA1YER178W VPS63O13549 108 aa5.61□□□□□ -1.51
PDA1YER178W INO2P26798 304 aa5.61□□□□□ -1.51
PDA1YER178W VMA8P32610 256 aaKnown RBP5.61□□□□□ -1.51
PDA1YER178W ATP3P38077 311 aaKnown RBP5.61□□□□□ -1.51
PDA1YER178W GPP2P40106 250 aaKnown RBP5.61□□□□□ -1.51
PDA1YER178W YIR035CP40579 254 aa5.61□□□□□ -1.51
PDA1YER178W FSH2Q05015 223 aa5.61□□□□□ -1.51
PDA1YER178W IRC23Q08416 157 aa5.61□□□□□ -1.51
PDA1YER178W USV1Q12132 391 aa5.61□□□□□ -1.51
PDA1YER178W PRM4Q12498 284 aa5.61□□□□□ -1.51
PDA1YER178W HTB1P02293 131 aaKnown RBP5.6□□□□□ -1.51
PDA1YER178W NOP1P15646 327 aaKnown RBP5.6□□□□□ -1.51
PDA1YER178W SUA5P32579 426 aa5.6□□□□□ -1.51
PDA1YER178W YPC1P38298 316 aa5.6□□□□□ -1.51
PDA1YER178W MSO1P53604 210 aaKnown RBP5.6□□□□□ -1.51
PDA1YER178W RRT7Q07829 113 aa5.6□□□□□ -1.51
PDA1YER178W YJR112W-AQ3E743 109 aa5.6□□□□□ -1.51
PDA1YER178W PHO85P17157 305 aa5.59□□□□□ -1.51
PDA1YER178W YKL102CP34249 101 aa5.59□□□□□ -1.51
PDA1YER178W YKL162CP36052 402 aa5.59□□□□□ -1.51
PDA1YER178W ECM31P38122 312 aa5.59□□□□□ -1.51
PDA1YER178W ERV15P38312 142 aa5.59□□□□□ -1.51
PDA1YER178W YHR138CP38841 114 aaPredicted RBP5.59□□□□□ -1.51
PDA1YER178W YJL163CP46996 555 aa5.59□□□□□ -1.51
PDA1YER178W YJR111CP47148 283 aaKnown RBP5.59□□□□□ -1.51
PDA1YER178W YIP1P53039 248 aa5.59□□□□□ -1.51
PDA1YER178W YGR050CP53231 118 aa5.59□□□□□ -1.51
PDA1YER178W HCH1P53834 153 aa5.59□□□□□ -1.51
PDA1YER178W YLR224WQ05947 369 aa5.59□□□□□ -1.51
PDA1YER178W PBP4Q07362 185 aaKnown RBP5.59□□□□□ -1.51
PDA1YER178W TFB5Q3E7C1 72 aaPredicted RBP5.59□□□□□ -1.51
PDA1YER178W YER190C-BP0CX94 160 aa5.58□□□□□ -1.52
PDA1YER178W YEL077W-AP0CX95 160 aa5.58□□□□□ -1.52
PDA1YER178W YGR296C-BP0CX96 160 aa5.58□□□□□ -1.52
PDA1YER178W YPL283W-BP0CX97 160 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms