RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W EFM5P53200 248 aaKnown RBP1.48□□□□□ -2.17
SNC1YAL030W YNL140CP53910 189 aa1.48□□□□□ -2.17
SNC1YAL030W DAD3P69850 94 aa1.48□□□□□ -2.17
SNC1YAL030W PRM15Q03262 622 aa1.48□□□□□ -2.17
SNC1YAL030W HPT1Q04178 221 aaKnown RBP1.48□□□□□ -2.17
SNC1YAL030W YMR315WQ04869 349 aaKnown RBP1.48□□□□□ -2.17
SNC1YAL030W GRX8Q05926 109 aa1.48□□□□□ -2.17
SNC1YAL030W NEJ1Q06148 342 aa1.48□□□□□ -2.17
SNC1YAL030W YLR031WQ07978 186 aa1.48□□□□□ -2.17
SNC1YAL030W YOL160WQ08321 113 aa1.48□□□□□ -2.17
SNC1YAL030W RIO1Q12196 484 aaKnown RBP1.48□□□□□ -2.17
SNC1YAL030W ARO7P32178 256 aa1.47□□□□□ -2.17
SNC1YAL030W MDH3P32419 343 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
SNC1YAL030W VMA11P32842 164 aa1.47□□□□□ -2.17
SNC1YAL030W MRPL17P36528 281 aa1.47□□□□□ -2.17
SNC1YAL030W LSM4P40070 187 aaKnown RBP1.47□□□□□ -2.17
SNC1YAL030W PGD1P40356 397 aa1.47□□□□□ -2.17
SNC1YAL030W ICE2P40499 491 aa1.47□□□□□ -2.17
SNC1YAL030W TMA22P47089 198 aaPredicted RBP1.47□□□□□ -2.17
SNC1YAL030W ARP3P47117 449 aaKnown RBP1.47□□□□□ -2.17
SNC1YAL030W YJR146WP47174 117 aa1.47□□□□□ -2.17
SNC1YAL030W DSK2P48510 373 aa1.47□□□□□ -2.17
SNC1YAL030W COS6P53344 381 aa1.47□□□□□ -2.17
SNC1YAL030W GRE1Q08969 168 aa1.47□□□□□ -2.17
SNC1YAL030W VPS68Q12016 184 aa1.47□□□□□ -2.17
SNC1YAL030W YLR050CQ12155 161 aaKnown RBP1.47□□□□□ -2.17
SNC1YAL030W YFR032C-BQ8TGU2 87 aa1.47□□□□□ -2.17
SNC1YAL030W NOP1P15646 327 aaKnown RBP1.46□□□□□ -2.18
SNC1YAL030W CKS1P20486 150 aaKnown RBP1.46□□□□□ -2.18
SNC1YAL030W TRX3P25372 127 aa1.46□□□□□ -2.18
SNC1YAL030W YKR041WP36134 250 aa1.46□□□□□ -2.18
SNC1YAL030W UMP1P38293 148 aa1.46□□□□□ -2.18
SNC1YAL030W YHR180WP38868 163 aa1.46□□□□□ -2.18
SNC1YAL030W NVJ1P38881 321 aa1.46□□□□□ -2.18
SNC1YAL030W NUP49Q02199 472 aa1.46□□□□□ -2.18
SNC1YAL030W HNT1Q04344 158 aaKnown RBP1.46□□□□□ -2.18
SNC1YAL030W DYN3Q04949 312 aa1.46□□□□□ -2.18
SNC1YAL030W HRT1Q08273 121 aa1.46□□□□□ -2.18
SNC1YAL030W YOR283WQ12040 230 aaKnown RBP1.46□□□□□ -2.18
SNC1YAL030W EMC6Q12431 108 aa1.46□□□□□ -2.18
SNC1YAL030W MHT1Q12525 324 aa1.46□□□□□ -2.18
SNC1YAL030W YLR422WQ06409 1932 aa1.45□□□□□ -2.18
SNC1YAL030W ATP15P21306 62 aa1.45□□□□□ -2.18
SNC1YAL030W AHC2P25649 128 aa1.45□□□□□ -2.18
SNC1YAL030W YCR090CP25654 182 aaKnown RBP1.45□□□□□ -2.18
SNC1YAL030W RME1P32338 300 aaKnown RBP1.45□□□□□ -2.18
SNC1YAL030W SNC2P33328 115 aa1.45□□□□□ -2.18
SNC1YAL030W AIM2P39721 246 aa1.45□□□□□ -2.18
SNC1YAL030W YER121WP40076 114 aa1.45□□□□□ -2.18
SNC1YAL030W YER134CP40081 178 aa1.45□□□□□ -2.18
SNC1YAL030W GVP36P40531 326 aaKnown RBP1.45□□□□□ -2.18
SNC1YAL030W DOC1P53068 250 aa1.45□□□□□ -2.18
SNC1YAL030W ARO8P53090 500 aaKnown RBP1.45□□□□□ -2.18
SNC1YAL030W YGR219WP53307 113 aa1.45□□□□□ -2.18
SNC1YAL030W PGA1P53896 198 aa1.45□□□□□ -2.18
SNC1YAL030W SLM2P53955 656 aa1.45□□□□□ -2.18
SNC1YAL030W SPG3Q04398 127 aaPredicted RBP1.45□□□□□ -2.18
SNC1YAL030W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SNC1YAL030W ODC2Q99297 307 aa1.45□□□□□ -2.18
SNC1YAL030W FAS1P07149 2051 aaKnown RBP1.44□□□□□ -2.18
SNC1YAL030W CYR1P08678 2026 aaKnown RBP1.44□□□□□ -2.18
SNC1YAL030W TIM9O74700 87 aa1.44□□□□□ -2.18
SNC1YAL030W QCR2P07257 368 aa1.44□□□□□ -2.18
SNC1YAL030W SEC14P24280 304 aaKnown RBP1.44□□□□□ -2.18
SNC1YAL030W PEX4P29340 183 aa1.44□□□□□ -2.18
SNC1YAL030W UBC6P33296 250 aaPredicted RBP1.44□□□□□ -2.18
SNC1YAL030W YOR062CP36025 268 aa1.44□□□□□ -2.18
SNC1YAL030W SHE2P36068 246 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SNC1YAL030W YBR285WP38354 144 aa1.44□□□□□ -2.18
SNC1YAL030W SVP26P38869 228 aa1.44□□□□□ -2.18
SNC1YAL030W MTW1P39731 289 aa1.44□□□□□ -2.18
SNC1YAL030W YER076CP40049 302 aa1.44□□□□□ -2.18
SNC1YAL030W YKE4P40544 346 aa1.44□□□□□ -2.18
SNC1YAL030W RPL33BP41056 107 aaKnown RBP1.44□□□□□ -2.18
SNC1YAL030W SER2P42941 309 aa1.44□□□□□ -2.18
SNC1YAL030W TDA4P47153 279 aa1.44□□□□□ -2.18
SNC1YAL030W AIM34Q03673 198 aa1.44□□□□□ -2.18
SNC1YAL030W GPI17Q04080 534 aa1.44□□□□□ -2.18
SNC1YAL030W SHH4Q06236 168 aa1.44□□□□□ -2.18
SNC1YAL030W SUE1Q06524 206 aa1.44□□□□□ -2.18
SNC1YAL030W FSF1Q12029 327 aaKnown RBP1.44□□□□□ -2.18
SNC1YAL030W MPD1Q12404 318 aaKnown RBP1.44□□□□□ -2.18
SNC1YAL030W YPR014CQ6B0W2 109 aa1.44□□□□□ -2.18
SNC1YAL030W CMD1P06787 147 aaKnown RBP1.43□□□□□ -2.18
SNC1YAL030W CPA1P07258 411 aaKnown RBP1.43□□□□□ -2.18
SNC1YAL030W RPS24AP0CX31 135 aaKnown RBP1.43□□□□□ -2.18
SNC1YAL030W RPS24BP0CX32 135 aaKnown RBP1.43□□□□□ -2.18
SNC1YAL030W UTR5P32630 166 aa1.43□□□□□ -2.18
SNC1YAL030W KDX1P36005 433 aa1.43□□□□□ -2.18
SNC1YAL030W PAN3P36102 679 aaPredicted RBP1.43□□□□□ -2.18
SNC1YAL030W TVP38P36164 337 aa1.43□□□□□ -2.18
SNC1YAL030W OPY1P38271 328 aa1.43□□□□□ -2.18
SNC1YAL030W AME1P38313 324 aa1.43□□□□□ -2.18
SNC1YAL030W CIS3P47001 227 aa1.43□□□□□ -2.18
SNC1YAL030W YJR111CP47148 283 aaKnown RBP1.43□□□□□ -2.18
SNC1YAL030W YNR062CP53748 327 aa1.43□□□□□ -2.18
SNC1YAL030W CGI121Q03705 181 aaKnown RBP1.43□□□□□ -2.18
SNC1YAL030W MRPS8Q03799 155 aa1.43□□□□□ -2.18
SNC1YAL030W PLP1Q04004 230 aa1.43□□□□□ -2.18
SNC1YAL030W BRX1Q08235 291 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 102.3 ms