RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C RAD24P32641 659 aa7.24□□□□□ -1.25
UBC11YOR339C NUP133P36161 1157 aa7.23□□□□□ -1.25
UBC11YOR339C CST6P40535 587 aa7.23□□□□□ -1.25
UBC11YOR339C HPC2Q01448 625 aa7.23□□□□□ -1.25
UBC11YOR339C CSI1Q04368 295 aa7.23□□□□□ -1.25
UBC11YOR339C RIX7Q07844 837 aaKnown RBP7.23□□□□□ -1.25
UBC11YOR339C NOP8Q08287 484 aaPredicted RBP7.23□□□□□ -1.25
UBC11YOR339C SWC3P31376 625 aa7.22□□□□□ -1.25
UBC11YOR339C YJR008WP47085 338 aa7.22□□□□□ -1.25
UBC11YOR339C TRP5P00931 707 aaKnown RBP7.21□□□□□ -1.26
UBC11YOR339C LPD1P09624 499 aaKnown RBP7.21□□□□□ -1.26
UBC11YOR339C HOP09932 586 aa7.21□□□□□ -1.26
UBC11YOR339C YLR271WQ06152 274 aa7.21□□□□□ -1.26
UBC11YOR339C RPS19AP07280 144 aaKnown RBP7.2□□□□□ -1.26
UBC11YOR339C RPS19BP07281 144 aaPredicted RBP7.2□□□□□ -1.26
UBC11YOR339C YGL015CP33199 130 aa7.2□□□□□ -1.26
UBC11YOR339C RAT1Q02792 1006 aaKnown RBP7.2□□□□□ -1.26
UBC11YOR339C FCP1Q03254 732 aa7.2□□□□□ -1.26
UBC11YOR339C PKH1Q03407 766 aa7.2□□□□□ -1.26
UBC11YOR339C PMD1P32634 1753 aa7.2□□□□□ -1.26
UBC11YOR339C BOI2P39969 1040 aa7.19□□□□□ -1.26
UBC11YOR339C POL32P47110 350 aa7.19□□□□□ -1.26
UBC11YOR339C TFC8Q12308 588 aa7.19□□□□□ -1.26
UBC11YOR339C YNG2P38806 282 aaKnown RBP7.18□□□□□ -1.26
UBC11YOR339C SET1P38827 1080 aaKnown RBP7.18□□□□□ -1.26
UBC11YOR339C PUF6Q04373 656 aaKnown RBP7.18□□□□□ -1.26
UBC11YOR339C HAT1Q12341 374 aa7.18□□□□□ -1.26
UBC11YOR339C ILV3P39522 585 aaKnown RBP7.17□□□□□ -1.26
UBC11YOR339C UBP12P39538 1254 aa7.17□□□□□ -1.26
UBC11YOR339C ITC1P53125 1264 aa7.17□□□□□ -1.26
UBC11YOR339C EAF6P47128 113 aa7.16□□□□□ -1.26
UBC11YOR339C MSN5P52918 1224 aa7.16□□□□□ -1.26
UBC11YOR339C SPO1P53541 631 aa7.16□□□□□ -1.26
UBC11YOR339C BDF2Q07442 638 aa7.16□□□□□ -1.26
UBC11YOR339C PSH1Q12161 406 aa7.16□□□□□ -1.26
UBC11YOR339C SSK22P25390 1331 aaPredicted RBP7.16□□□□□ -1.26
UBC11YOR339C HXT10P43581 546 aa7.15□□□□□ -1.26
UBC11YOR339C DIB1Q06819 143 aaPredicted RBP7.15□□□□□ -1.26
UBC11YOR339C CAF20P12962 161 aaKnown RBP7.14□□□□□ -1.27
UBC11YOR339C FPR3P38911 411 aaKnown RBP7.14□□□□□ -1.27
UBC11YOR339C SMY1P32364 656 aaKnown RBP7.13□□□□□ -1.27
UBC11YOR339C ERT1P38140 529 aa7.13□□□□□ -1.27
UBC11YOR339C PFF1P38244 976 aa7.13□□□□□ -1.27
UBC11YOR339C CWH41P53008 833 aa7.13□□□□□ -1.27
UBC11YOR339C IRC3Q06683 689 aa7.13□□□□□ -1.27
UBC11YOR339C GCD7P32502 381 aaPredicted RBP7.12□□□□□ -1.27
UBC11YOR339C YKL222CP35995 705 aa7.12□□□□□ -1.27
UBC11YOR339C UBP16Q02863 499 aa7.12□□□□□ -1.27
UBC11YOR339C SYF1Q04048 859 aaPredicted RBP7.12□□□□□ -1.27
UBC11YOR339C CTT1P06115 562 aa7.11□□□□□ -1.27
UBC11YOR339C FRD1P32614 470 aaKnown RBP7.11□□□□□ -1.27
UBC11YOR339C KIN4Q01919 800 aa7.11□□□□□ -1.27
UBC11YOR339C MTC5Q03897 1148 aa7.11□□□□□ -1.27
UBC11YOR339C SAC3P46674 1301 aa7.1□□□□□ -1.27
UBC11YOR339C SIT4P20604 311 aa7.1□□□□□ -1.27
UBC11YOR339C RPN1P38764 993 aaKnown RBP7.1□□□□□ -1.27
UBC11YOR339C HGH1P48362 394 aaKnown RBP7.1□□□□□ -1.27
UBC11YOR339C ERO1Q03103 563 aa7.1□□□□□ -1.27
UBC11YOR339C SNU66Q12420 587 aaPredicted RBP7.1□□□□□ -1.27
UBC11YOR339C DUR1,2P32528 1835 aaKnown RBP7.1□□□□□ -1.27
UBC11YOR339C SUP35P05453 685 aaKnown RBP7.09□□□□□ -1.27
UBC11YOR339C SLA1P32790 1244 aa7.09□□□□□ -1.27
UBC11YOR339C NMD2P38798 1089 aaKnown RBP7.09□□□□□ -1.27
UBC11YOR339C SAS4Q04003 481 aa7.09□□□□□ -1.27
UBC11YOR339C NGR1P32831 672 aaKnown RBP7.08□□□□□ -1.28
UBC11YOR339C YER156CP40093 338 aaKnown RBP7.08□□□□□ -1.28
UBC11YOR339C HKR1P41809 1802 aa7.08□□□□□ -1.28
UBC11YOR339C OXP1P28273 1286 aa7.07□□□□□ -1.28
UBC11YOR339C MGM1P32266 881 aa7.07□□□□□ -1.28
UBC11YOR339C SSF1P38789 453 aaPredicted RBP7.07□□□□□ -1.28
UBC11YOR339C ICP55P40051 511 aa7.07□□□□□ -1.28
UBC11YOR339C THI3Q07471 609 aa7.07□□□□□ -1.28
UBC11YOR339C DPH6Q12429 685 aa7.07□□□□□ -1.28
UBC11YOR339C SEC18P18759 758 aaKnown RBP7.06□□□□□ -1.28
UBC11YOR339C ICL1P28240 557 aaPredicted RBP7.06□□□□□ -1.28
UBC11YOR339C BDP1P46678 594 aa7.06□□□□□ -1.28
UBC11YOR339C GYP5Q12344 894 aa7.06□□□□□ -1.28
UBC11YOR339C NCB2Q92317 146 aa7.06□□□□□ -1.28
UBC11YOR339C FAS2P19097 1887 aaKnown RBP7.06□□□□□ -1.28
UBC11YOR339C ADR1P07248 1323 aa7.05□□□□□ -1.28
UBC11YOR339C RFC1P38630 861 aaKnown RBP7.05□□□□□ -1.28
UBC11YOR339C SPL2P38839 148 aa7.05□□□□□ -1.28
UBC11YOR339C RPT4P53549 437 aaKnown RBP7.05□□□□□ -1.28
UBC11YOR339C AI2P03876 854 aa7.04□□□□□ -1.28
UBC11YOR339C RET1P22276 1149 aaKnown RBP7.04□□□□□ -1.28
UBC11YOR339C KRE2P27809 442 aa7.04□□□□□ -1.28
UBC11YOR339C KTR3P38130 404 aaPredicted RBP7.04□□□□□ -1.28
UBC11YOR339C MAP2P38174 421 aaKnown RBP7.04□□□□□ -1.28
UBC11YOR339C SRC1Q03707 834 aa7.04□□□□□ -1.28
UBC11YOR339C NKP2Q06162 153 aa7.04□□□□□ -1.28
UBC11YOR339C GRX6Q12438 231 aa7.04□□□□□ -1.28
UBC11YOR339C FIG2P25653 1609 aa7.04□□□□□ -1.28
UBC11YOR339C TOP1P04786 769 aa7.03□□□□□ -1.28
UBC11YOR339C SSA1P10591 642 aaKnown RBP7.03□□□□□ -1.28
UBC11YOR339C YKU70P32807 602 aa7.03□□□□□ -1.28
UBC11YOR339C YGL242CP53066 181 aa7.03□□□□□ -1.28
UBC11YOR339C RPN7Q06103 429 aaKnown RBP7.03□□□□□ -1.28
UBC11YOR339C POM152P39685 1337 aa7.02□□□□□ -1.28
UBC11YOR339C PDR18P53756 1333 aa7.02□□□□□ -1.28
UBC11YOR339C NOT3P06102 836 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms