RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C PDR18P53756 1333 aa8.72□□□□□ -1.01
RUP1YOR138C ISW2Q08773 1120 aa8.72□□□□□ -1.01
RUP1YOR138C NOP58Q12499 511 aaKnown RBP8.72□□□□□ -1.01
RUP1YOR138C LYS2P07702 1392 aa8.72□□□□□ -1.01
RUP1YOR138C HGH1P48362 394 aaKnown RBP8.71□□□□□ -1.01
RUP1YOR138C RIM20Q12033 661 aa8.71□□□□□ -1.01
RUP1YOR138C ECM21P38167 1117 aaKnown RBP8.7□□□□□ -1.02
RUP1YOR138C ESC2Q06340 456 aa8.7□□□□□ -1.02
RUP1YOR138C CWH41P53008 833 aa8.7□□□□□ -1.02
RUP1YOR138C DNM1P54861 757 aa8.7□□□□□ -1.02
RUP1YOR138C PEX19Q07418 342 aa8.7□□□□□ -1.02
RUP1YOR138C INP54Q08227 384 aaKnown RBP8.7□□□□□ -1.02
RUP1YOR138C DUR1,2P32528 1835 aaKnown RBP8.69□□□□□ -1.02
RUP1YOR138C RPL19AP0CX82 189 aaKnown RBP8.69□□□□□ -1.02
RUP1YOR138C RPL19BP0CX83 189 aaPredicted RBP8.69□□□□□ -1.02
RUP1YOR138C CST6P40535 587 aa8.69□□□□□ -1.02
RUP1YOR138C VPS64Q03944 604 aa8.69□□□□□ -1.02
RUP1YOR138C AAP1P37898 856 aaKnown RBP8.68□□□□□ -1.02
RUP1YOR138C ENT3P47160 408 aa8.68□□□□□ -1.02
RUP1YOR138C TSR3Q12094 313 aaKnown RBP8.68□□□□□ -1.02
RUP1YOR138C TCB1Q12466 1186 aa8.68□□□□□ -1.02
RUP1YOR138C HYR1P40581 163 aaKnown RBP8.68□□□□□ -1.02
RUP1YOR138C KRE33P53914 1056 aaKnown RBP8.68□□□□□ -1.02
RUP1YOR138C BRE1Q07457 700 aaKnown RBP8.68□□□□□ -1.02
RUP1YOR138C AIM44Q99299 758 aa8.68□□□□□ -1.02
RUP1YOR138C SWI1P09547 1314 aa8.67□□□□□ -1.02
RUP1YOR138C PEX14P53112 341 aa8.67□□□□□ -1.02
RUP1YOR138C LPD1P09624 499 aaKnown RBP8.66□□□□□ -1.02
RUP1YOR138C UBP12P39538 1254 aa8.66□□□□□ -1.02
RUP1YOR138C MRPS35P53292 345 aa8.66□□□□□ -1.02
RUP1YOR138C MEC3Q02574 474 aa8.66□□□□□ -1.02
RUP1YOR138C SLA1P32790 1244 aa8.66□□□□□ -1.02
RUP1YOR138C PRX1P34227 261 aaKnown RBP8.66□□□□□ -1.02
RUP1YOR138C TPM2P40414 161 aa8.65□□□□□ -1.02
RUP1YOR138C MLC1P53141 149 aa8.65□□□□□ -1.02
RUP1YOR138C MFT1P33441 392 aaKnown RBP8.64□□□□□ -1.03
RUP1YOR138C MRPL10P36520 322 aa8.64□□□□□ -1.03
RUP1YOR138C SSF1P38789 453 aaPredicted RBP8.64□□□□□ -1.03
RUP1YOR138C AIM9P40053 627 aaKnown RBP8.64□□□□□ -1.03
RUP1YOR138C CCT5P40413 562 aaKnown RBP8.64□□□□□ -1.03
RUP1YOR138C CTF18P49956 741 aa8.64□□□□□ -1.03
RUP1YOR138C ARP5P53946 755 aa8.64□□□□□ -1.03
RUP1YOR138C ALO1P54783 526 aaKnown RBP8.64□□□□□ -1.03
RUP1YOR138C SSL2Q00578 843 aa8.64□□□□□ -1.03
RUP1YOR138C SES1P07284 462 aaKnown RBP8.63□□□□□ -1.03
RUP1YOR138C CYC8P14922 966 aa8.63□□□□□ -1.03
RUP1YOR138C STM1P39015 273 aaKnown RBP8.63□□□□□ -1.03
RUP1YOR138C YGL242CP53066 181 aa8.63□□□□□ -1.03
RUP1YOR138C TRS33Q99394 268 aa8.63□□□□□ -1.03
RUP1YOR138C FRS2P15625 503 aaKnown RBP8.63□□□□□ -1.03
RUP1YOR138C TIM50Q02776 476 aa8.63□□□□□ -1.03
RUP1YOR138C KTR1P27810 393 aaKnown RBP8.61□□□□□ -1.03
RUP1YOR138C KTR3P38130 404 aaPredicted RBP8.61□□□□□ -1.03
RUP1YOR138C VID28P40547 921 aa8.61□□□□□ -1.03
RUP1YOR138C HXT10P43581 546 aa8.61□□□□□ -1.03
RUP1YOR138C ADE16P54113 591 aaKnown RBP8.61□□□□□ -1.03
RUP1YOR138C PKH1Q03407 766 aa8.61□□□□□ -1.03
RUP1YOR138C SGD1Q06132 899 aa8.61□□□□□ -1.03
RUP1YOR138C OSM1P21375 501 aaKnown RBP8.61□□□□□ -1.03
RUP1YOR138C MBR1P23493 339 aa8.61□□□□□ -1.03
RUP1YOR138C APL2P36000 726 aaPredicted RBP8.61□□□□□ -1.03
RUP1YOR138C NPR3P38742 1146 aa8.61□□□□□ -1.03
RUP1YOR138C PIB2P53191 635 aa8.61□□□□□ -1.03
RUP1YOR138C PGA3Q12746 312 aaKnown RBP8.61□□□□□ -1.03
RUP1YOR138C CPA2P03965 1118 aaKnown RBP8.6□□□□□ -1.03
RUP1YOR138C TPM1P17536 199 aaKnown RBP8.6□□□□□ -1.03
RUP1YOR138C TTI1P36097 1038 aa8.6□□□□□ -1.03
RUP1YOR138C RMT2Q03305 412 aa8.6□□□□□ -1.03
RUP1YOR138C ETT1Q08421 412 aaKnown RBP8.6□□□□□ -1.03
RUP1YOR138C RPG1P38249 964 aaKnown RBP8.59□□□□□ -1.03
RUP1YOR138C YBP2P53169 641 aa8.59□□□□□ -1.03
RUP1YOR138C HOS3Q02959 697 aaKnown RBP8.59□□□□□ -1.03
RUP1YOR138C VMS1Q04311 632 aaKnown RBP8.59□□□□□ -1.03
RUP1YOR138C TAF13P11747 167 aa8.59□□□□□ -1.03
RUP1YOR138C ELM1P32801 640 aa8.59□□□□□ -1.03
RUP1YOR138C MNR2P35724 969 aa8.59□□□□□ -1.03
RUP1YOR138C ATG13Q06628 738 aa8.59□□□□□ -1.03
RUP1YOR138C PBY1P38254 753 aa8.58□□□□□ -1.04
RUP1YOR138C CIC1P38779 376 aaKnown RBP8.58□□□□□ -1.04
RUP1YOR138C SPO22P40511 975 aa8.58□□□□□ -1.04
RUP1YOR138C YJR008WP47085 338 aa8.58□□□□□ -1.04
RUP1YOR138C SSK22P25390 1331 aaPredicted RBP8.58□□□□□ -1.04
RUP1YOR138C RSF2P46974 1380 aa8.58□□□□□ -1.04
RUP1YOR138C QCR6P00127 147 aa8.58□□□□□ -1.04
RUP1YOR138C ATE1P16639 503 aa8.58□□□□□ -1.04
RUP1YOR138C RDS1P25611 832 aa8.58□□□□□ -1.04
RUP1YOR138C STU2P46675 888 aa8.58□□□□□ -1.04
RUP1YOR138C FRK1Q03002 865 aaPredicted RBP8.58□□□□□ -1.04
RUP1YOR138C PSH1Q12161 406 aa8.58□□□□□ -1.04
RUP1YOR138C ELG1Q12050 791 aa8.57□□□□□ -1.04
RUP1YOR138C MPE1P35728 441 aaKnown RBP8.56□□□□□ -1.04
RUP1YOR138C FCP1Q03254 732 aa8.56□□□□□ -1.04
RUP1YOR138C NOP53Q12080 455 aaKnown RBP8.56□□□□□ -1.04
RUP1YOR138C SFI1Q12369 946 aa8.56□□□□□ -1.04
RUP1YOR138C RPN1P38764 993 aaKnown RBP8.55□□□□□ -1.04
RUP1YOR138C ESF1Q06344 628 aaKnown RBP8.55□□□□□ -1.04
RUP1YOR138C AI2P03876 854 aa8.54□□□□□ -1.04
RUP1YOR138C YER130CP39959 443 aa8.54□□□□□ -1.04
RUP1YOR138C PSK2Q08217 1101 aa8.54□□□□□ -1.04
RUP1YOR138C DDP1Q99321 188 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms