RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CDC25P04821 1589 aa4.02□□□□□ -1.77
MSH2YOL090W NUD1P32336 851 aa4.02□□□□□ -1.77
MSH2YOL090W EAP1P36041 632 aaKnown RBP4.02□□□□□ -1.77
MSH2YOL090W ENP1P38333 483 aaKnown RBP4.02□□□□□ -1.77
MSH2YOL090W APL6P46682 809 aa4.02□□□□□ -1.77
MSH2YOL090W MTO1P53070 669 aa4.02□□□□□ -1.77
MSH2YOL090W SPR28Q04921 423 aa4.02□□□□□ -1.77
MSH2YOL090W ISF1P32488 338 aa4.02□□□□□ -1.77
MSH2YOL090W PBP2P38151 413 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
MSH2YOL090W TAT2P38967 592 aa4.02□□□□□ -1.77
MSH2YOL090W NAB3P38996 802 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
MSH2YOL090W YJR142WP47173 342 aa4.02□□□□□ -1.77
MSH2YOL090W YNL035CP53962 389 aaKnown RBP4.02□□□□□ -1.77
MSH2YOL090W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
MSH2YOL090W YMR196WQ04336 1088 aa4.02□□□□□ -1.77
MSH2YOL090W PUF6Q04373 656 aaKnown RBP4.02□□□□□ -1.77
MSH2YOL090W BUD20Q08004 166 aaPredicted RBP4.02□□□□□ -1.77
MSH2YOL090W RKR1Q04781 1562 aa4.01□□□□□ -1.77
MSH2YOL090W RPA135P22138 1203 aaKnown RBP4.01□□□□□ -1.77
MSH2YOL090W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
MSH2YOL090W PIN2Q12057 282 aa4.01□□□□□ -1.77
MSH2YOL090W ESP1Q03018 1630 aa4.01□□□□□ -1.77
MSH2YOL090W RTG1P32607 177 aa4.01□□□□□ -1.77
MSH2YOL090W ISU2Q12056 156 aa4.01□□□□□ -1.77
MSH2YOL090W MGE1P38523 228 aa4□□□□□ -1.77
MSH2YOL090W RTF1P53064 558 aa4□□□□□ -1.77
MSH2YOL090W TUB4P53378 473 aa4□□□□□ -1.77
MSH2YOL090W PNP1Q05788 311 aa4□□□□□ -1.77
MSH2YOL090W MCM2P29469 868 aa4□□□□□ -1.77
MSH2YOL090W PAC1P39946 494 aaKnown RBP4□□□□□ -1.77
MSH2YOL090W SPP1Q03012 353 aa4□□□□□ -1.77
MSH2YOL090W POB3Q04636 552 aaKnown RBP4□□□□□ -1.77
MSH2YOL090W BDF2Q07442 638 aa4□□□□□ -1.77
MSH2YOL090W BRE1Q07457 700 aaKnown RBP4□□□□□ -1.77
MSH2YOL090W MCM16Q12262 181 aa4□□□□□ -1.77
MSH2YOL090W BNI1P41832 1953 aa4□□□□□ -1.77
MSH2YOL090W GAL11P19659 1081 aa4□□□□□ -1.77
MSH2YOL090W ISW1P38144 1129 aa4□□□□□ -1.77
MSH2YOL090W QDR1P40475 563 aa4□□□□□ -1.77
MSH2YOL090W GPI13Q07830 1017 aa4□□□□□ -1.77
MSH2YOL090W ROM1P53046 1155 aa3.99□□□□□ -1.77
MSH2YOL090W SVL3Q03088 825 aaKnown RBP3.99□□□□□ -1.77
MSH2YOL090W YDL121CQ07541 149 aa3.99□□□□□ -1.77
MSH2YOL090W MNN1P39106 762 aa3.99□□□□□ -1.77
MSH2YOL090W UBP12P39538 1254 aa3.99□□□□□ -1.77
MSH2YOL090W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
MSH2YOL090W PPM2Q08282 695 aa3.98□□□□□ -1.77
MSH2YOL090W STI1P15705 589 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
MSH2YOL090W SDH2P21801 266 aa3.98□□□□□ -1.77
MSH2YOL090W SEC61P32915 480 aa3.98□□□□□ -1.77
MSH2YOL090W BOI1P38041 980 aaKnown RBP3.98□□□□□ -1.77
MSH2YOL090W AIM21P40563 679 aa3.98□□□□□ -1.77
MSH2YOL090W ACF4P47129 309 aa3.98□□□□□ -1.77
MSH2YOL090W KIP3P53086 805 aaKnown RBP3.98□□□□□ -1.77
MSH2YOL090W CDC53Q12018 815 aaKnown RBP3.98□□□□□ -1.77
MSH2YOL090W MIP1P15801 1254 aa3.97□□□□□ -1.77
MSH2YOL090W GLO3P38682 493 aaKnown RBP3.97□□□□□ -1.77
MSH2YOL090W KRI1P42846 591 aaKnown RBP3.97□□□□□ -1.77
MSH2YOL090W DNM1P54861 757 aa3.97□□□□□ -1.77
MSH2YOL090W FIG4P42837 879 aa3.97□□□□□ -1.77
MSH2YOL090W ACS2P52910 683 aaKnown RBP3.97□□□□□ -1.77
MSH2YOL090W NAF1P53919 492 aaKnown RBP3.97□□□□□ -1.77
MSH2YOL090W GEA2P39993 1459 aaKnown RBP3.97□□□□□ -1.77
MSH2YOL090W MOD5P07884 428 aa3.96□□□□□ -1.77
MSH2YOL090W VMA4P22203 233 aaKnown RBP3.96□□□□□ -1.77
MSH2YOL090W BOI2P39969 1040 aa3.96□□□□□ -1.77
MSH2YOL090W FKH1P40466 484 aa3.96□□□□□ -1.77
MSH2YOL090W YPP1P46951 817 aa3.96□□□□□ -1.77
MSH2YOL090W YJL049WP47048 450 aa3.96□□□□□ -1.77
MSH2YOL090W ECM16Q04217 1267 aaKnown RBP3.96□□□□□ -1.77
MSH2YOL090W PHO4P07270 312 aaKnown RBP3.96□□□□□ -1.78
MSH2YOL090W HAL5P38970 855 aaKnown RBP3.96□□□□□ -1.78
MSH2YOL090W ARH1P48360 493 aa3.96□□□□□ -1.78
MSH2YOL090W PUS6P53294 404 aa3.96□□□□□ -1.78
MSH2YOL090W YDL206WQ12424 762 aa3.96□□□□□ -1.78
MSH2YOL090W AIR2Q12476 344 aaKnown RBP3.96□□□□□ -1.78
MSH2YOL090W YGR161W-CQ3E744 92 aa3.96□□□□□ -1.78
MSH2YOL090W SEC6P32844 805 aa3.96□□□□□ -1.78
MSH2YOL090W RPT1P33299 467 aaKnown RBP3.96□□□□□ -1.78
MSH2YOL090W FUI1P38196 639 aa3.96□□□□□ -1.78
MSH2YOL090W YEN1P40028 759 aa3.96□□□□□ -1.78
MSH2YOL090W DAK2P43550 591 aa3.96□□□□□ -1.78
MSH2YOL090W EMP47P43555 445 aa3.96□□□□□ -1.78
MSH2YOL090W PDC1P06169 563 aaKnown RBP3.95□□□□□ -1.78
MSH2YOL090W MPE1P35728 441 aaKnown RBP3.95□□□□□ -1.78
MSH2YOL090W RPO31P04051 1460 aa3.95□□□□□ -1.78
MSH2YOL090W FUR4P05316 633 aaKnown RBP3.95□□□□□ -1.78
MSH2YOL090W MET6P05694 767 aaKnown RBP3.95□□□□□ -1.78
MSH2YOL090W PHO87P25360 923 aa3.95□□□□□ -1.78
MSH2YOL090W MAD1P40957 749 aa3.95□□□□□ -1.78
MSH2YOL090W HUL5P53119 910 aa3.95□□□□□ -1.78
MSH2YOL090W WRS1Q12109 432 aaKnown RBP3.95□□□□□ -1.78
MSH2YOL090W XRN1P22147 1528 aaKnown RBP3.95□□□□□ -1.78
MSH2YOL090W SRS2P12954 1174 aa3.94□□□□□ -1.78
MSH2YOL090W TY4A-JP47023 414 aa3.94□□□□□ -1.78
MSH2YOL090W NUP82P40368 713 aa3.94□□□□□ -1.78
MSH2YOL090W PEX21P50091 288 aa3.94□□□□□ -1.78
MSH2YOL090W HAP5Q02516 242 aa3.94□□□□□ -1.78
MSH2YOL090W TOS4Q06266 489 aa3.94□□□□□ -1.78
MSH2YOL090W PUN1Q06991 263 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms