RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W PNP1Q05788 311 aa5.59□□□□□ -1.51
SRP1YNL189W NOP8Q08287 484 aaPredicted RBP5.59□□□□□ -1.51
SRP1YNL189W UBP1P25037 809 aa5.59□□□□□ -1.52
SRP1YNL189W BOL3P39724 118 aa5.59□□□□□ -1.52
SRP1YNL189W ALD4P46367 519 aaKnown RBP5.59□□□□□ -1.52
SRP1YNL189W SRS2P12954 1174 aa5.58□□□□□ -1.52
SRP1YNL189W SSF1P38789 453 aaPredicted RBP5.58□□□□□ -1.52
SRP1YNL189W AAD14P42884 376 aa5.58□□□□□ -1.52
SRP1YNL189W YPQ2Q06328 317 aa5.58□□□□□ -1.52
SRP1YNL189W NGR1P32831 672 aaKnown RBP5.57□□□□□ -1.52
SRP1YNL189W DLD1P32891 587 aa5.57□□□□□ -1.52
SRP1YNL189W PTK2P47116 818 aaKnown RBP5.57□□□□□ -1.52
SRP1YNL189W KAR5Q04746 504 aa5.57□□□□□ -1.52
SRP1YNL189W TRS33Q99394 268 aa5.57□□□□□ -1.52
SRP1YNL189W ERP5P38819 212 aa5.56□□□□□ -1.52
SRP1YNL189W DLD3P39976 496 aaKnown RBP5.56□□□□□ -1.52
SRP1YNL189W SUM1P46676 1062 aa5.56□□□□□ -1.52
SRP1YNL189W GCR2Q01722 534 aa5.56□□□□□ -1.52
SRP1YNL189W YBL113CQ7M4S9 792 aa5.56□□□□□ -1.52
SRP1YNL189W BOI1P38041 980 aaKnown RBP5.56□□□□□ -1.52
SRP1YNL189W ARG82P07250 355 aa5.55□□□□□ -1.52
SRP1YNL189W YBR197CP38306 217 aa5.55□□□□□ -1.52
SRP1YNL189W SSN3P39073 555 aa5.55□□□□□ -1.52
SRP1YNL189W BRE2P43132 505 aa5.55□□□□□ -1.52
SRP1YNL189W YNL165WP53891 406 aa5.55□□□□□ -1.52
SRP1YNL189W FOX2Q02207 900 aaKnown RBP5.55□□□□□ -1.52
SRP1YNL189W RPP2BP02400 110 aaKnown RBP5.54□□□□□ -1.52
SRP1YNL189W TRL1P09880 827 aaKnown RBP5.54□□□□□ -1.52
SRP1YNL189W RTT106P40161 455 aa5.54□□□□□ -1.52
SRP1YNL189W CAB1Q04430 367 aa5.54□□□□□ -1.52
SRP1YNL189W HXT5P38695 592 aa5.53□□□□□ -1.52
SRP1YNL189W ISC10P32645 267 aa5.52□□□□□ -1.53
SRP1YNL189W GRS1P38088 690 aaKnown RBP5.52□□□□□ -1.53
SRP1YNL189W MDJ2P42834 146 aa5.52□□□□□ -1.53
SRP1YNL189W CWH41P53008 833 aa5.52□□□□□ -1.53
SRP1YNL189W SRF1Q12516 437 aa5.52□□□□□ -1.53
SRP1YNL189W SHM1P37292 490 aaPredicted RBP5.52□□□□□ -1.53
SRP1YNL189W ALA1P40825 983 aaKnown RBP5.52□□□□□ -1.53
SRP1YNL189W SEN54Q02825 467 aaPredicted RBP5.52□□□□□ -1.53
SRP1YNL189W TY1A-DR3Q12441 440 aa5.52□□□□□ -1.53
SRP1YNL189W FUR4P05316 633 aaKnown RBP5.51□□□□□ -1.53
SRP1YNL189W MCM1P11746 286 aa5.51□□□□□ -1.53
SRP1YNL189W GLO3P38682 493 aaKnown RBP5.51□□□□□ -1.53
SRP1YNL189W Q0182Q9ZZW1 134 aa5.51□□□□□ -1.53
SRP1YNL189W RPS31P05759 152 aaKnown RBP5.5□□□□□ -1.53
SRP1YNL189W QDR1P40475 563 aa5.5□□□□□ -1.53
SRP1YNL189W YJR098CP47139 656 aa5.5□□□□□ -1.53
SRP1YNL189W LSO1Q3E827 93 aa5.5□□□□□ -1.53
SRP1YNL189W NUP85P46673 744 aa5.49□□□□□ -1.53
SRP1YNL189W MLF3P32047 452 aa5.48□□□□□ -1.53
SRP1YNL189W RRN6P32786 894 aa5.48□□□□□ -1.53
SRP1YNL189W SLA1P32790 1244 aa5.48□□□□□ -1.53
SRP1YNL189W IPL1P38991 367 aa5.48□□□□□ -1.53
SRP1YNL189W JJJ2P46997 583 aa5.48□□□□□ -1.53
SRP1YNL189W ATG1P53104 897 aa5.48□□□□□ -1.53
SRP1YNL189W TCB1Q12466 1186 aa5.48□□□□□ -1.53
SRP1YNL189W RPB10P22139 70 aa5.48□□□□□ -1.53
SRP1YNL189W KTR2P33550 425 aa5.48□□□□□ -1.53
SRP1YNL189W MRPL33P20084 86 aa5.47□□□□□ -1.53
SRP1YNL189W YHL050CP38721 697 aa5.47□□□□□ -1.53
SRP1YNL189W YHR219WP38900 624 aa5.47□□□□□ -1.53
SRP1YNL189W MSN5P52918 1224 aa5.47□□□□□ -1.53
SRP1YNL189W LSC2P53312 427 aa5.47□□□□□ -1.53
SRP1YNL189W FRT1Q99332 602 aa5.47□□□□□ -1.53
SRP1YNL189W DAL1P32375 460 aa5.46□□□□□ -1.54
SRP1YNL189W VMA3P25515 160 aa5.45□□□□□ -1.54
SRP1YNL189W IRE1P32361 1115 aa5.45□□□□□ -1.54
SRP1YNL189W SLD2P34252 453 aa5.45□□□□□ -1.54
SRP1YNL189W OPT2Q06593 877 aa5.45□□□□□ -1.54
SRP1YNL189W SCD5P34758 872 aa5.45□□□□□ -1.54
SRP1YNL189W SUT1P53032 299 aaKnown RBP5.45□□□□□ -1.54
SRP1YNL189W NUT2Q06213 157 aa5.45□□□□□ -1.54
SRP1YNL189W APC11Q12157 165 aa5.45□□□□□ -1.54
SRP1YNL189W PSH1Q12161 406 aa5.45□□□□□ -1.54
SRP1YNL189W AHP1P38013 176 aaKnown RBP5.44□□□□□ -1.54
SRP1YNL189W STM1P39015 273 aaKnown RBP5.44□□□□□ -1.54
SRP1YNL189W ACF4P47129 309 aa5.44□□□□□ -1.54
SRP1YNL189W MSC6Q08818 692 aaKnown RBP5.44□□□□□ -1.54
SRP1YNL189W PDC6P26263 563 aaKnown RBP5.43□□□□□ -1.54
SRP1YNL189W MET22P32179 357 aa5.43□□□□□ -1.54
SRP1YNL189W QDR2P40474 542 aa5.43□□□□□ -1.54
SRP1YNL189W WHI5Q12416 295 aa5.43□□□□□ -1.54
SRP1YNL189W NAB2P32505 525 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SRP1YNL189W VTC4P47075 721 aa5.42□□□□□ -1.54
SRP1YNL189W ALD2P47771 506 aa5.42□□□□□ -1.54
SRP1YNL189W CDC19P00549 500 aaKnown RBP5.41□□□□□ -1.54
SRP1YNL189W GPI13Q07830 1017 aa5.41□□□□□ -1.54
SRP1YNL189W MTO1P53070 669 aa5.41□□□□□ -1.54
SRP1YNL189W NAM8Q00539 523 aaKnown RBP5.41□□□□□ -1.54
SRP1YNL189W UTP4Q06679 776 aaKnown RBP5.41□□□□□ -1.54
SRP1YNL189W GAR1P28007 205 aaKnown RBP5.4□□□□□ -1.55
SRP1YNL189W YDR444WQ04093 687 aa5.4□□□□□ -1.55
SRP1YNL189W MNL2Q12205 849 aa5.4□□□□□ -1.55
SRP1YNL189W LEU1P07264 779 aaKnown RBP5.39□□□□□ -1.55
SRP1YNL189W KAP122P32767 1081 aa5.39□□□□□ -1.55
SRP1YNL189W OSH7P38755 437 aa5.39□□□□□ -1.55
SRP1YNL189W RGA1P39083 1007 aa5.39□□□□□ -1.55
SRP1YNL189W UBP2Q01476 1272 aa5.39□□□□□ -1.55
SRP1YNL189W TRS120Q04183 1289 aa5.39□□□□□ -1.55
SRP1YNL189W TY1A-BLQ12266 440 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms