RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP5	YMR229C	VPS53	P47061	822 aa		3.75	□□□□□ -1.81
RRP5	YMR229C	PIP2	P52960	996 aa		3.75	□□□□□ -1.81
RRP5	YMR229C	APC11	Q12157	165 aa		3.75	□□□□□ -1.81
RRP5	YMR229C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
RRP5	YMR229C	ROM2	P51862	1356 aa	Known RBP	3.75	□□□□□ -1.81
RRP5	YMR229C	PRD1	P25375	712 aa		3.75	□□□□□ -1.81
RRP5	YMR229C	NUP133	P36161	1157 aa		3.75	□□□□□ -1.81
RRP5	YMR229C	YMR074C	Q04773	145 aa		3.75	□□□□□ -1.81
RRP5	YMR229C	LSP1	Q12230	341 aa	Known RBP	3.75	□□□□□ -1.81
RRP5	YMR229C	RPS24A	P0CX31	135 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	RPS24B	P0CX32	135 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	OLA1	P38219	394 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	PRP31	P49704	494 aa	Predicted RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	NST1	P53935	1240 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	BRE1	Q07457	700 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	JJJ2	P46997	583 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	YCG1	Q06680	1035 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	BMS1	Q08965	1183 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	LPD1	P09624	499 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	IMP2'	P32351	346 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	AKL1	P38080	1108 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	YKE2	P52553	114 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	CLF1	Q12309	687 aa	Predicted RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	YRF1-4	O13559	1382 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	RPA190	P10964	1664 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	SPC110	P32380	944 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	NDC80	P40460	691 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	YGR130C	P53278	816 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	MPC54	Q08550	464 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	LTV1	P34078	463 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	RVS167	P39743	482 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	FKH1	P40466	484 aa		3.74	□□□□□ -1.81
RRP5	YMR229C	RPN7	Q06103	429 aa	Known RBP	3.74	□□□□□ -1.81
RRP5	YMR229C	KRE5	P22023	1365 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	RAV1	P47104	1357 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	MRPL10	P36520	322 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	YIL092W	P40497	633 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	TIM50	Q02776	476 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	CSM3	Q04659	317 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	OMS1	Q06668	471 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	PIF1	P07271	859 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	HCA4	P20448	770 aa	Known RBP	3.73	□□□□□ -1.81
RRP5	YMR229C	VPS35	P34110	944 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	RPN12	P32496	274 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	SLI15	P38283	698 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	MSH4	P40965	878 aa	Predicted RBP	3.73	□□□□□ -1.81
RRP5	YMR229C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
RRP5	YMR229C	DNM1	P54861	757 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	UTP13	Q05946	817 aa	Known RBP	3.73	□□□□□ -1.81
RRP5	YMR229C	REI1	P38344	393 aa	Predicted RBP	3.73	□□□□□ -1.81
RRP5	YMR229C	TEA1	P47988	759 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	HST1	P53685	503 aa		3.73	□□□□□ -1.81
RRP5	YMR229C	SUB1	P54000	292 aa	Known RBP	3.73	□□□□□ -1.81
RRP5	YMR229C	TSR3	Q12094	313 aa	Known RBP	3.73	□□□□□ -1.81
RRP5	YMR229C	NOT3	P06102	836 aa	Known RBP	3.72	□□□□□ -1.81
RRP5	YMR229C	CTT1	P06115	562 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	RGP1	P16664	663 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	CCT5	P40413	562 aa	Known RBP	3.72	□□□□□ -1.81
RRP5	YMR229C	TAP42	Q04372	366 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	TLG2	Q08144	397 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	TY4A-H	Q6Q5P6	413 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	YLR419W	Q06698	1435 aa	Known RBP	3.72	□□□□□ -1.81
RRP5	YMR229C	LSB1	P53281	241 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	RTT109	Q07794	436 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	MRP7	P12687	371 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	RRP43	P25359	394 aa	Predicted RBP	3.72	□□□□□ -1.81
RRP5	YMR229C	BUD2	P33314	1104 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	APT1	P49435	187 aa	Known RBP	3.72	□□□□□ -1.81
RRP5	YMR229C	UTP22	P53254	1237 aa	Predicted RBP	3.72	□□□□□ -1.81
RRP5	YMR229C	MCD4	P36051	919 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	VPS72	Q03388	795 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	CSC1	Q06538	782 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	PEX19	Q07418	342 aa		3.72	□□□□□ -1.81
RRP5	YMR229C	HSP82	P02829	709 aa	Known RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	SPT2	P06843	333 aa	Predicted RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	YKL222C	P35995	705 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	ENV11	P53246	860 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	CSI1	Q04368	295 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	MDM38	Q08179	573 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	STU2	P46675	888 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	HAP1	P0CE41	1502 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	RPS0A	P32905	252 aa	Known RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	OPY1	P38271	328 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	MLC1	P53141	149 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	YDR341C	Q05506	607 aa	Known RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	YLH47	Q06493	454 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	SWI1	P09547	1314 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	NUP145	P49687	1317 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	MDL2	P33311	773 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	OSH3	P38713	996 aa	Known RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	NUG1	P40010	520 aa	Known RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	LYS14	P40971	790 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	UTP14	Q04500	899 aa	Known RBP	3.71	□□□□□ -1.82
RRP5	YMR229C	HIM1	Q06674	414 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	OPY2	Q06810	360 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	BDF2	Q07442	638 aa		3.71	□□□□□ -1.82
RRP5	YMR229C	HXK1	P04806	485 aa	Known RBP	3.7	□□□□□ -1.82
RRP5	YMR229C	TOA1	P32773	286 aa		3.7	□□□□□ -1.82
RRP5	YMR229C	GPT2	P36148	743 aa		3.7	□□□□□ -1.82
RRP5	YMR229C	SMY2	P32909	740 aa	Known RBP	3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms