RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W SUM1P46676 1062 aa3.37□□□□□ -1.87
VPS34YLR240W LCB5Q06147 687 aaKnown RBP3.37□□□□□ -1.87
VPS34YLR240W YML083CQ04526 418 aa3.37□□□□□ -1.87
VPS34YLR240W YLR346CQ06139 101 aa3.37□□□□□ -1.87
VPS34YLR240W OPT2Q06593 877 aa3.37□□□□□ -1.87
VPS34YLR240W MSN5P52918 1224 aa3.36□□□□□ -1.87
VPS34YLR240W YDR444WQ04093 687 aa3.36□□□□□ -1.87
VPS34YLR240W YPQ2Q06328 317 aa3.36□□□□□ -1.87
VPS34YLR240W CYT1P07143 309 aa3.36□□□□□ -1.87
VPS34YLR240W SSA1P10591 642 aaKnown RBP3.36□□□□□ -1.87
VPS34YLR240W GLY1P37303 387 aaKnown RBP3.36□□□□□ -1.87
VPS34YLR240W UBX7P38349 436 aa3.36□□□□□ -1.87
VPS34YLR240W SSN3P39073 555 aa3.36□□□□□ -1.87
VPS34YLR240W UTP7P40055 554 aaKnown RBP3.36□□□□□ -1.87
VPS34YLR240W MCM1P11746 286 aa3.35□□□□□ -1.87
VPS34YLR240W TCB1Q12466 1186 aa3.35□□□□□ -1.87
VPS34YLR240W UBP2Q01476 1272 aa3.35□□□□□ -1.87
VPS34YLR240W DAL1P32375 460 aa3.34□□□□□ -1.87
VPS34YLR240W TY1A-BLQ12266 440 aa3.34□□□□□ -1.87
VPS34YLR240W VAN1P23642 535 aa3.34□□□□□ -1.88
VPS34YLR240W JJJ2P46997 583 aa3.34□□□□□ -1.88
VPS34YLR240W SCW11P53189 542 aa3.34□□□□□ -1.88
VPS34YLR240W PUF6Q04373 656 aaKnown RBP3.34□□□□□ -1.88
VPS34YLR240W TY1A-DR3Q12441 440 aa3.34□□□□□ -1.88
VPS34YLR240W NGR1P32831 672 aaKnown RBP3.33□□□□□ -1.88
VPS34YLR240W AHP1P38013 176 aaKnown RBP3.33□□□□□ -1.88
VPS34YLR240W TRS33Q99394 268 aa3.33□□□□□ -1.88
VPS34YLR240W SLA1P32790 1244 aa3.33□□□□□ -1.88
VPS34YLR240W CDC19P00549 500 aaKnown RBP3.32□□□□□ -1.88
VPS34YLR240W GEF1P37020 779 aa3.32□□□□□ -1.88
VPS34YLR240W ALA1P40825 983 aaKnown RBP3.32□□□□□ -1.88
VPS34YLR240W RPL34AP87262 121 aaPredicted RBP3.32□□□□□ -1.88
VPS34YLR240W SUV3P32580 737 aa3.31□□□□□ -1.88
VPS34YLR240W SHM1P37292 490 aaPredicted RBP3.31□□□□□ -1.88
VPS34YLR240W UBP15P50101 1230 aa3.31□□□□□ -1.88
VPS34YLR240W CWC15Q03772 175 aaKnown RBP3.31□□□□□ -1.88
VPS34YLR240W SCD5P34758 872 aa3.31□□□□□ -1.88
VPS34YLR240W OSH7P38755 437 aa3.31□□□□□ -1.88
VPS34YLR240W SRS2P12954 1174 aa3.3□□□□□ -1.88
VPS34YLR240W GAR1P28007 205 aaKnown RBP3.3□□□□□ -1.88
VPS34YLR240W IRE1P32361 1115 aa3.3□□□□□ -1.88
VPS34YLR240W TPS3P38426 1054 aaKnown RBP3.3□□□□□ -1.88
VPS34YLR240W HXT5P38695 592 aa3.3□□□□□ -1.88
VPS34YLR240W ACO2P39533 789 aa3.3□□□□□ -1.88
VPS34YLR240W ALD4P46367 519 aaKnown RBP3.3□□□□□ -1.88
VPS34YLR240W CWH41P53008 833 aa3.3□□□□□ -1.88
VPS34YLR240W UTP4Q06679 776 aaKnown RBP3.3□□□□□ -1.88
VPS34YLR240W ROG3P43602 733 aa3.3□□□□□ -1.88
VPS34YLR240W YNL165WP53891 406 aa3.3□□□□□ -1.88
VPS34YLR240W CAB1Q04430 367 aa3.3□□□□□ -1.88
VPS34YLR240W YDL176WQ12027 708 aa3.3□□□□□ -1.88
VPS34YLR240W RPS31P05759 152 aaKnown RBP3.29□□□□□ -1.88
VPS34YLR240W MLF3P32047 452 aa3.29□□□□□ -1.88
VPS34YLR240W PUN1Q06991 263 aa3.29□□□□□ -1.88
VPS34YLR240W PDC6P26263 563 aaKnown RBP3.29□□□□□ -1.88
VPS34YLR240W YIR007WP40566 764 aa3.29□□□□□ -1.88
VPS34YLR240W CAF120P53836 1060 aa3.29□□□□□ -1.88
VPS34YLR240W TY1A-MR1Q04215 440 aa3.29□□□□□ -1.88
VPS34YLR240W PSH1Q12161 406 aa3.29□□□□□ -1.88
VPS34YLR240W NAM8Q00539 523 aaKnown RBP3.28□□□□□ -1.88
VPS34YLR240W YTA6P40328 754 aa3.28□□□□□ -1.88
VPS34YLR240W PNP1Q05788 311 aa3.28□□□□□ -1.88
VPS34YLR240W Q0182Q9ZZW1 134 aa3.28□□□□□ -1.88
VPS34YLR240W CCP1P00431 361 aa3.27□□□□□ -1.89
VPS34YLR240W ALD2P47771 506 aa3.27□□□□□ -1.89
VPS34YLR240W FOX2Q02207 900 aaKnown RBP3.27□□□□□ -1.89
VPS34YLR240W LEU1P07264 779 aaKnown RBP3.27□□□□□ -1.89
VPS34YLR240W GBP2P25555 427 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VPS34YLR240W CDC3P32457 520 aaKnown RBP3.27□□□□□ -1.89
VPS34YLR240W YBR197CP38306 217 aa3.27□□□□□ -1.89
VPS34YLR240W MRPL33P20084 86 aa3.26□□□□□ -1.89
VPS34YLR240W RGA1P39083 1007 aa3.26□□□□□ -1.89
VPS34YLR240W INO80P53115 1489 aa3.26□□□□□ -1.89
VPS34YLR240W ISC10P32645 267 aa3.26□□□□□ -1.89
VPS34YLR240W BOL3P39724 118 aa3.26□□□□□ -1.89
VPS34YLR240W CUZ1P53899 274 aa3.26□□□□□ -1.89
VPS34YLR240W DIT1P21623 536 aa3.25□□□□□ -1.89
VPS34YLR240W FUR4P05316 633 aaKnown RBP3.24□□□□□ -1.89
VPS34YLR240W RGP1P16664 663 aa3.24□□□□□ -1.89
VPS34YLR240W RPC31P17890 251 aa3.24□□□□□ -1.89
VPS34YLR240W RRN6P32786 894 aa3.24□□□□□ -1.89
VPS34YLR240W YPL062WQ02781 134 aa3.24□□□□□ -1.89
VPS34YLR240W KAR5Q04746 504 aa3.24□□□□□ -1.89
VPS34YLR240W RPP1AP05318 106 aaPredicted RBP3.24□□□□□ -1.89
VPS34YLR240W QDR2P40474 542 aa3.24□□□□□ -1.89
VPS34YLR240W MTO1P53070 669 aa3.24□□□□□ -1.89
VPS34YLR240W APC11Q12157 165 aa3.24□□□□□ -1.89
VPS34YLR240W STB3Q12427 513 aa3.24□□□□□ -1.89
VPS34YLR240W LSO1Q3E827 93 aa3.24□□□□□ -1.89
VPS34YLR240W VMA3P25515 160 aa3.23□□□□□ -1.89
VPS34YLR240W MRPL16P38064 232 aa3.23□□□□□ -1.89
VPS34YLR240W SKP1P52286 194 aa3.23□□□□□ -1.89
VPS34YLR240W YDR461C-AQ2V2P7 80 aa3.23□□□□□ -1.89
VPS34YLR240W KAP122P32767 1081 aa3.23□□□□□ -1.89
VPS34YLR240W BOI1P38041 980 aaKnown RBP3.23□□□□□ -1.89
VPS34YLR240W DYS1P38791 387 aa3.23□□□□□ -1.89
VPS34YLR240W SPR3P41901 512 aa3.23□□□□□ -1.89
VPS34YLR240W ATG1P53104 897 aa3.23□□□□□ -1.89
VPS34YLR240W YMR265CQ03508 461 aaKnown RBP3.23□□□□□ -1.89
VPS34YLR240W KTR2P33550 425 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms