RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C UTP22P53254 1237 aaPredicted RBP12.15□□□□□ -0.46
POM34YLR018C SPO1P53541 631 aa12.15□□□□□ -0.46
POM34YLR018C ALD3P54114 506 aa12.15□□□□□ -0.46
POM34YLR018C FCP1Q03254 732 aa12.14□□□□□ -0.47
POM34YLR018C UBP12P39538 1254 aa12.12□□□□□ -0.47
POM34YLR018C HPC2Q01448 625 aa12.12□□□□□ -0.47
POM34YLR018C ITC1P53125 1264 aa12.1□□□□□ -0.47
POM34YLR018C TOS1P38288 455 aa12.09□□□□□ -0.47
POM34YLR018C SET1P38827 1080 aaKnown RBP12.09□□□□□ -0.47
POM34YLR018C RIX7Q07844 837 aaKnown RBP12.09□□□□□ -0.47
POM34YLR018C PSH1Q12161 406 aa12.09□□□□□ -0.47
POM34YLR018C GCD7P32502 381 aaPredicted RBP12.07□□□□□ -0.48
POM34YLR018C HXT10P43581 546 aa12.07□□□□□ -0.48
POM34YLR018C RAT1Q02792 1006 aaKnown RBP12.07□□□□□ -0.48
POM34YLR018C HAT1Q12341 374 aa12.07□□□□□ -0.48
POM34YLR018C NMD2P38798 1089 aaKnown RBP12.06□□□□□ -0.48
POM34YLR018C HGH1P48362 394 aaKnown RBP12.03□□□□□ -0.48
POM34YLR018C SUP35P05453 685 aaKnown RBP12.02□□□□□ -0.49
POM34YLR018C SSK22P25390 1331 aaPredicted RBP12.02□□□□□ -0.49
POM34YLR018C MTC5Q03897 1148 aa12.01□□□□□ -0.49
POM34YLR018C BDF2Q07442 638 aa12.01□□□□□ -0.49
POM34YLR018C UTP10P42945 1769 aaKnown RBP12□□□□□ -0.49
POM34YLR018C RPC31P17890 251 aa12□□□□□ -0.49
POM34YLR018C RFC1P38630 861 aaKnown RBP12□□□□□ -0.49
POM34YLR018C BDP1P46678 594 aa12□□□□□ -0.49
POM34YLR018C DIB1Q06819 143 aaPredicted RBP12□□□□□ -0.49
POM34YLR018C SNU66Q12420 587 aaPredicted RBP12□□□□□ -0.49
POM34YLR018C SLA1P32790 1244 aa11.99□□□□□ -0.49
POM34YLR018C SSF1P38789 453 aaPredicted RBP11.99□□□□□ -0.49
POM34YLR018C NKP2Q06162 153 aa11.99□□□□□ -0.49
POM34YLR018C NCB2Q92317 146 aa11.99□□□□□ -0.49
POM34YLR018C CAF20P12962 161 aaKnown RBP11.98□□□□□ -0.49
POM34YLR018C IRC3Q06683 689 aa11.97□□□□□ -0.49
POM34YLR018C MSN5P52918 1224 aa11.96□□□□□ -0.49
POM34YLR018C ECM16Q04217 1267 aaKnown RBP11.96□□□□□ -0.49
POM34YLR018C SAC3P46674 1301 aa11.95□□□□□ -0.5
POM34YLR018C FRD1P32614 470 aaKnown RBP11.95□□□□□ -0.5
POM34YLR018C UBP16Q02863 499 aa11.95□□□□□ -0.5
POM34YLR018C SYF1Q04048 859 aaPredicted RBP11.95□□□□□ -0.5
POM34YLR018C RPN1P38764 993 aaKnown RBP11.94□□□□□ -0.5
POM34YLR018C EAF6P47128 113 aa11.94□□□□□ -0.5
POM34YLR018C SEC18P18759 758 aaKnown RBP11.93□□□□□ -0.5
POM34YLR018C NGR1P32831 672 aaKnown RBP11.93□□□□□ -0.5
POM34YLR018C PFF1P38244 976 aa11.93□□□□□ -0.5
POM34YLR018C GYP5Q12344 894 aa11.93□□□□□ -0.5
POM34YLR018C CWH41P53008 833 aa11.92□□□□□ -0.5
POM34YLR018C PDR18P53756 1333 aa11.91□□□□□ -0.5
POM34YLR018C AI2P03876 854 aa11.91□□□□□ -0.5
POM34YLR018C NOT3P06102 836 aaKnown RBP11.91□□□□□ -0.5
POM34YLR018C CDC16P09798 840 aa11.91□□□□□ -0.5
POM34YLR018C SIT4P20604 311 aa11.91□□□□□ -0.5
POM34YLR018C SMY1P32364 656 aaKnown RBP11.91□□□□□ -0.5
POM34YLR018C YGL242CP53066 181 aa11.91□□□□□ -0.5
POM34YLR018C RMD1Q03441 430 aa11.91□□□□□ -0.5
POM34YLR018C SAS4Q04003 481 aa11.91□□□□□ -0.5
POM34YLR018C THI3Q07471 609 aa11.91□□□□□ -0.5
POM34YLR018C KTR3P38130 404 aaPredicted RBP11.9□□□□□ -0.5
POM34YLR018C ERT1P38140 529 aa11.9□□□□□ -0.5
POM34YLR018C ECM21P38167 1117 aaKnown RBP11.9□□□□□ -0.5
POM34YLR018C DPH6Q12429 685 aa11.9□□□□□ -0.5
POM34YLR018C MGM1P32266 881 aa11.89□□□□□ -0.51
POM34YLR018C YKL222CP35995 705 aa11.89□□□□□ -0.51
POM34YLR018C ICP55P40051 511 aa11.89□□□□□ -0.51
POM34YLR018C ALO1P54783 526 aaKnown RBP11.89□□□□□ -0.51
POM34YLR018C SRC1Q03707 834 aa11.89□□□□□ -0.51
POM34YLR018C MLC1P53141 149 aa11.88□□□□□ -0.51
POM34YLR018C ERO1Q03103 563 aa11.88□□□□□ -0.51
POM34YLR018C RPN7Q06103 429 aaKnown RBP11.88□□□□□ -0.51
POM34YLR018C RAD50P12753 1312 aa11.87□□□□□ -0.51
POM34YLR018C YNL193WP53870 558 aa11.87□□□□□ -0.51
POM34YLR018C ADR1P07248 1323 aa11.86□□□□□ -0.51
POM34YLR018C CTT1P06115 562 aa11.86□□□□□ -0.51
POM34YLR018C VAS1P07806 1104 aaKnown RBP11.85□□□□□ -0.51
POM34YLR018C RPT4P53549 437 aaKnown RBP11.85□□□□□ -0.51
POM34YLR018C KIN4Q01919 800 aa11.85□□□□□ -0.51
POM34YLR018C RRI2Q12348 645 aa11.85□□□□□ -0.51
POM34YLR018C KRE2P27809 442 aa11.84□□□□□ -0.51
POM34YLR018C SPL2P38839 148 aa11.84□□□□□ -0.51
POM34YLR018C BRE1Q07457 700 aaKnown RBP11.84□□□□□ -0.51
POM34YLR018C POM152P39685 1337 aa11.84□□□□□ -0.51
POM34YLR018C PMD1P32634 1753 aa11.83□□□□□ -0.52
POM34YLR018C BRN1P38170 754 aa11.83□□□□□ -0.52
POM34YLR018C MRPS35P53292 345 aa11.83□□□□□ -0.52
POM34YLR018C NUG1P40010 520 aaKnown RBP11.82□□□□□ -0.52
POM34YLR018C YER156CP40093 338 aaKnown RBP11.82□□□□□ -0.52
POM34YLR018C RET1P22276 1149 aaKnown RBP11.81□□□□□ -0.52
POM34YLR018C ICL1P28240 557 aaPredicted RBP11.81□□□□□ -0.52
POM34YLR018C PIB2P53191 635 aa11.81□□□□□ -0.52
POM34YLR018C GCR2Q01722 534 aa11.81□□□□□ -0.52
POM34YLR018C DLD1P32891 587 aa11.8□□□□□ -0.52
POM34YLR018C HAL5P38970 855 aaKnown RBP11.8□□□□□ -0.52
POM34YLR018C IRC4Q03036 179 aa11.8□□□□□ -0.52
POM34YLR018C KTR1P27810 393 aaKnown RBP11.79□□□□□ -0.52
POM34YLR018C PBY1P38254 753 aa11.79□□□□□ -0.52
POM34YLR018C GLO3P38682 493 aaKnown RBP11.79□□□□□ -0.52
POM34YLR018C EPS1P40557 701 aa11.79□□□□□ -0.52
POM34YLR018C RIM20Q12033 661 aa11.79□□□□□ -0.52
POM34YLR018C GRX6Q12438 231 aa11.79□□□□□ -0.52
POM34YLR018C PIF1P07271 859 aa11.78□□□□□ -0.52
POM34YLR018C LCB1P25045 558 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms