RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W IRC3Q06683 689 aa7.19□□□□□ -1.26
LDB18YLL049W BDF2Q07442 638 aa7.19□□□□□ -1.26
LDB18YLL049W YOR238WQ08634 303 aa7.19□□□□□ -1.26
LDB18YLL049W CAF20P12962 161 aaKnown RBP7.18□□□□□ -1.26
LDB18YLL049W GRX6Q12438 231 aa7.18□□□□□ -1.26
LDB18YLL049W HVG1P0CE11 249 aa7.17□□□□□ -1.26
LDB18YLL049W MSM1P22438 575 aa7.17□□□□□ -1.26
LDB18YLL049W PAM1P37304 830 aaKnown RBP7.17□□□□□ -1.26
LDB18YLL049W MAL31P38156 614 aa7.16□□□□□ -1.26
LDB18YLL049W TIM50Q02776 476 aa7.16□□□□□ -1.26
LDB18YLL049W DPL1Q05567 589 aa7.16□□□□□ -1.26
LDB18YLL049W HIM1Q06674 414 aa7.16□□□□□ -1.26
LDB18YLL049W PHM7Q12252 991 aa7.16□□□□□ -1.26
LDB18YLL049W HKR1P41809 1802 aa7.15□□□□□ -1.26
LDB18YLL049W SER1P33330 395 aaKnown RBP7.15□□□□□ -1.26
LDB18YLL049W EMP47P43555 445 aa7.15□□□□□ -1.26
LDB18YLL049W YFR016CP43597 1233 aaKnown RBP7.15□□□□□ -1.26
LDB18YLL049W MDG1P53885 366 aa7.15□□□□□ -1.26
LDB18YLL049W CTF4Q01454 927 aa7.15□□□□□ -1.26
LDB18YLL049W DIB1Q06819 143 aaPredicted RBP7.15□□□□□ -1.26
LDB18YLL049W BSD2P38356 321 aa7.14□□□□□ -1.27
LDB18YLL049W YGR117CP53270 476 aa7.14□□□□□ -1.27
LDB18YLL049W RMT2Q03305 412 aa7.14□□□□□ -1.27
LDB18YLL049W CWC15Q03772 175 aaKnown RBP7.14□□□□□ -1.27
LDB18YLL049W NOP53Q12080 455 aaKnown RBP7.14□□□□□ -1.27
LDB18YLL049W AIM7Q12156 149 aa7.14□□□□□ -1.27
LDB18YLL049W HSP104P31539 908 aaKnown RBP7.13□□□□□ -1.27
LDB18YLL049W DSD1P53095 428 aa7.13□□□□□ -1.27
LDB18YLL049W YLR271WQ06152 274 aa7.13□□□□□ -1.27
LDB18YLL049W MOT2P34909 587 aaKnown RBP7.12□□□□□ -1.27
LDB18YLL049W VNX1P42839 908 aa7.12□□□□□ -1.27
LDB18YLL049W ORC1P54784 914 aaPredicted RBP7.12□□□□□ -1.27
LDB18YLL049W UBP16Q02863 499 aa7.12□□□□□ -1.27
LDB18YLL049W GSC2P40989 1895 aa7.11□□□□□ -1.27
LDB18YLL049W SCT1P32784 759 aa7.11□□□□□ -1.27
LDB18YLL049W YGL082WP53155 381 aa7.11□□□□□ -1.27
LDB18YLL049W CST9Q06032 482 aa7.11□□□□□ -1.27
LDB18YLL049W VPS13Q07878 3144 aa7.1□□□□□ -1.27
LDB18YLL049W NSR1P27476 414 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
LDB18YLL049W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
LDB18YLL049W CSR2Q12734 1121 aa7.1□□□□□ -1.27
LDB18YLL049W YPR117WQ06116 2489 aa7.09□□□□□ -1.27
LDB18YLL049W RTG3P38165 486 aa7.09□□□□□ -1.27
LDB18YLL049W YVH1Q02256 364 aaKnown RBP7.09□□□□□ -1.27
LDB18YLL049W TRM44Q02648 567 aaKnown RBP7.09□□□□□ -1.27
LDB18YLL049W PCS60P38137 543 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
LDB18YLL049W FRD1P32614 470 aaKnown RBP7.07□□□□□ -1.28
LDB18YLL049W PNT1P38969 423 aa7.07□□□□□ -1.28
LDB18YLL049W VPS4P52917 437 aa7.07□□□□□ -1.28
LDB18YLL049W SYF1Q04048 859 aaPredicted RBP7.07□□□□□ -1.28
LDB18YLL049W LYS2P07702 1392 aa7.07□□□□□ -1.28
LDB18YLL049W HPR1P17629 752 aaKnown RBP7.06□□□□□ -1.28
LDB18YLL049W ARG8P18544 423 aa7.06□□□□□ -1.28
LDB18YLL049W APE3P37302 537 aaKnown RBP7.06□□□□□ -1.28
LDB18YLL049W RPN1P38764 993 aaKnown RBP7.06□□□□□ -1.28
LDB18YLL049W BBC1P47068 1157 aa7.06□□□□□ -1.28
LDB18YLL049W STV1P37296 890 aa7.05□□□□□ -1.28
LDB18YLL049W RSC30P38781 883 aa7.05□□□□□ -1.28
LDB18YLL049W YAP5P40574 245 aa7.05□□□□□ -1.28
LDB18YLL049W MGA2P40578 1113 aa7.05□□□□□ -1.28
LDB18YLL049W RSM7P47150 247 aa7.05□□□□□ -1.28
LDB18YLL049W RRT6P53117 311 aaPredicted RBP7.05□□□□□ -1.28
LDB18YLL049W SPP1Q03012 353 aa7.05□□□□□ -1.28
LDB18YLL049W ALE1Q08548 619 aa7.05□□□□□ -1.28
LDB18YLL049W SET4P42948 560 aa7.04□□□□□ -1.28
LDB18YLL049W SAS4Q04003 481 aa7.04□□□□□ -1.28
LDB18YLL049W SSP2Q08646 371 aa7.04□□□□□ -1.28
LDB18YLL049W WSC3Q12215 556 aa7.04□□□□□ -1.28
LDB18YLL049W AI2P03876 854 aa7.03□□□□□ -1.28
LDB18YLL049W KCC4P25389 1037 aa7.03□□□□□ -1.28
LDB18YLL049W AOS1Q06624 347 aa7.03□□□□□ -1.28
LDB18YLL049W SSK22P25390 1331 aaPredicted RBP7.02□□□□□ -1.28
LDB18YLL049W TAO3P40468 2376 aa7.02□□□□□ -1.29
LDB18YLL049W AFG2P32794 780 aa7.02□□□□□ -1.29
LDB18YLL049W AKL1P38080 1108 aaKnown RBP7.02□□□□□ -1.29
LDB18YLL049W GAS5Q08193 484 aa7.02□□□□□ -1.29
LDB18YLL049W CRF1Q04930 467 aa7.01□□□□□ -1.29
LDB18YLL049W HAT1Q12341 374 aa7.01□□□□□ -1.29
LDB18YLL049W RBA50Q04418 439 aa7□□□□□ -1.29
LDB18YLL049W YPR204WQ08995 1032 aa7□□□□□ -1.29
LDB18YLL049W NTH2P35172 780 aa6.99□□□□□ -1.29
LDB18YLL049W PSD2P53037 1138 aaKnown RBP6.99□□□□□ -1.29
LDB18YLL049W RRG1Q12167 365 aaPredicted RBP6.99□□□□□ -1.29
LDB18YLL049W KAR2P16474 682 aaKnown RBP6.98□□□□□ -1.29
LDB18YLL049W CLA4P48562 842 aa6.98□□□□□ -1.29
LDB18YLL049W CBP1P07252 654 aa6.97□□□□□ -1.29
LDB18YLL049W FBP1P09201 348 aa6.97□□□□□ -1.29
LDB18YLL049W APL2P36000 726 aaPredicted RBP6.97□□□□□ -1.29
LDB18YLL049W KRE2P27809 442 aa6.96□□□□□ -1.3
LDB18YLL049W AIR2Q12476 344 aaKnown RBP6.96□□□□□ -1.3
LDB18YLL049W FLO11P08640 1367 aa6.95□□□□□ -1.3
LDB18YLL049W DLD1P32891 587 aa6.95□□□□□ -1.3
LDB18YLL049W TRP5P00931 707 aaKnown RBP6.94□□□□□ -1.3
LDB18YLL049W ASH1P34233 588 aa6.94□□□□□ -1.3
LDB18YLL049W TIF11P38912 153 aaKnown RBP6.94□□□□□ -1.3
LDB18YLL049W YLR225CQ05948 407 aaKnown RBP6.94□□□□□ -1.3
LDB18YLL049W SGD1Q06132 899 aa6.94□□□□□ -1.3
LDB18YLL049W UGA3P26370 528 aa6.93□□□□□ -1.3
LDB18YLL049W UTP7P40055 554 aaKnown RBP6.93□□□□□ -1.3
LDB18YLL049W PAH1P32567 862 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms