RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C PIF1P07271 859 aa2.79□□□□□ -1.96
VPS13YLL040C PGI1P12709 554 aaKnown RBP2.79□□□□□ -1.96
VPS13YLL040C RPL22BP56628 122 aaKnown RBP2.79□□□□□ -1.96
VPS13YLL040C MRC1P25588 1096 aa2.79□□□□□ -1.96
VPS13YLL040C MSH1P25846 959 aa2.79□□□□□ -1.96
VPS13YLL040C PHM7Q12252 991 aa2.79□□□□□ -1.96
VPS13YLL040C ADR1P07248 1323 aa2.79□□□□□ -1.96
VPS13YLL040C PTP3P40048 928 aa2.78□□□□□ -1.96
VPS13YLL040C MPH3P0CE00 602 aa2.78□□□□□ -1.96
VPS13YLL040C YNL058CP53947 316 aa2.78□□□□□ -1.96
VPS13YLL040C BRE1Q07457 700 aaKnown RBP2.78□□□□□ -1.96
VPS13YLL040C YEL043WP32618 956 aa2.78□□□□□ -1.96
VPS13YLL040C YNG2P38806 282 aaKnown RBP2.78□□□□□ -1.96
VPS13YLL040C ALF1P53904 254 aa2.78□□□□□ -1.96
VPS13YLL040C SUP35P05453 685 aaKnown RBP2.78□□□□□ -1.96
VPS13YLL040C SSF2Q12153 453 aaPredicted RBP2.78□□□□□ -1.97
VPS13YLL040C BIK1P11709 440 aa2.77□□□□□ -1.97
VPS13YLL040C KCC4P25389 1037 aa2.77□□□□□ -1.97
VPS13YLL040C ESC2Q06340 456 aa2.77□□□□□ -1.97
VPS13YLL040C FIG2P25653 1609 aa2.77□□□□□ -1.97
VPS13YLL040C TY4B-HP0C2J7 1802 aa2.77□□□□□ -1.97
VPS13YLL040C TY4B-JP47024 1803 aa2.77□□□□□ -1.97
VPS13YLL040C MATALPHA2P0CY08 210 aa2.77□□□□□ -1.97
VPS13YLL040C HMLALPHA2P0CY09 210 aa2.77□□□□□ -1.97
VPS13YLL040C NFU1P32860 256 aa2.77□□□□□ -1.97
VPS13YLL040C YKT6P36015 200 aaKnown RBP2.77□□□□□ -1.97
VPS13YLL040C NEW1Q08972 1196 aaKnown RBP2.77□□□□□ -1.97
VPS13YLL040C POM152P39685 1337 aa2.77□□□□□ -1.97
VPS13YLL040C PPX1P38698 397 aa2.77□□□□□ -1.97
VPS13YLL040C YLR407WQ06070 228 aa2.77□□□□□ -1.97
VPS13YLL040C RVS167P39743 482 aaKnown RBP2.77□□□□□ -1.97
VPS13YLL040C MEC3Q02574 474 aa2.77□□□□□ -1.97
VPS13YLL040C AAP1P37898 856 aaKnown RBP2.77□□□□□ -1.97
VPS13YLL040C BMS1Q08965 1183 aaKnown RBP2.77□□□□□ -1.97
VPS13YLL040C ECM21P38167 1117 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C BCD1P38772 366 aa2.76□□□□□ -1.97
VPS13YLL040C MLC1P53141 149 aa2.76□□□□□ -1.97
VPS13YLL040C NKP2Q06162 153 aa2.76□□□□□ -1.97
VPS13YLL040C IRC3Q06683 689 aa2.76□□□□□ -1.97
VPS13YLL040C ISW2Q08773 1120 aa2.76□□□□□ -1.97
VPS13YLL040C ELG1Q12050 791 aa2.76□□□□□ -1.97
VPS13YLL040C CUE3P53137 624 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C RCM1P53972 490 aa2.76□□□□□ -1.97
VPS13YLL040C TRP5P00931 707 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C RPS9BP05755 195 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C SEC23P15303 768 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C CCC2P38995 1004 aa2.76□□□□□ -1.97
VPS13YLL040C BBC1P47068 1157 aa2.76□□□□□ -1.97
VPS13YLL040C NCB2Q92317 146 aa2.76□□□□□ -1.97
VPS13YLL040C TDA3P38758 523 aa2.76□□□□□ -1.97
VPS13YLL040C CRG1P38892 291 aaRIP-Chip data2.76□□□□□ -1.97 RIP-Chip
VPS13YLL040C CCT5P40413 562 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C INP54Q08227 384 aaKnown RBP2.76□□□□□ -1.97
VPS13YLL040C MRP7P12687 371 aa2.76□□□□□ -1.97
VPS13YLL040C RIA1P53893 1110 aa2.76□□□□□ -1.97
VPS13YLL040C PEX19Q07418 342 aa2.76□□□□□ -1.97
VPS13YLL040C CLF1Q12309 687 aaPredicted RBP2.76□□□□□ -1.97
VPS13YLL040C PET123P17558 318 aa2.75□□□□□ -1.97
VPS13YLL040C MRPL10P36520 322 aa2.75□□□□□ -1.97
VPS13YLL040C PKH1Q03407 766 aa2.75□□□□□ -1.97
VPS13YLL040C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
VPS13YLL040C MVP1P40959 511 aaKnown RBP2.75□□□□□ -1.97
VPS13YLL040C CSI1Q04368 295 aa2.75□□□□□ -1.97
VPS13YLL040C SSP2Q08646 371 aa2.75□□□□□ -1.97
VPS13YLL040C DIB1Q06819 143 aaPredicted RBP2.75□□□□□ -1.97
VPS13YLL040C YOL087CQ99247 1116 aa2.75□□□□□ -1.97
VPS13YLL040C DPB3P27344 201 aa2.75□□□□□ -1.97
VPS13YLL040C NUG1P40010 520 aaKnown RBP2.75□□□□□ -1.97
VPS13YLL040C ERV41Q04651 352 aa2.75□□□□□ -1.97
VPS13YLL040C ABP140Q08641 628 aaKnown RBP2.75□□□□□ -1.97
VPS13YLL040C NPA3P47122 385 aa2.75□□□□□ -1.97
VPS13YLL040C SRP54P20424 541 aaKnown RBP2.75□□□□□ -1.97
VPS13YLL040C HOS3Q02959 697 aaKnown RBP2.75□□□□□ -1.97
VPS13YLL040C ATG9Q12142 997 aa2.75□□□□□ -1.97
VPS13YLL040C ARD1P07347 238 aaPredicted RBP2.75□□□□□ -1.97
VPS13YLL040C MUD2P36084 527 aaKnown RBP2.75□□□□□ -1.97
VPS13YLL040C SMC3P47037 1230 aa2.75□□□□□ -1.97
VPS13YLL040C HIM1Q06674 414 aa2.74□□□□□ -1.97
VPS13YLL040C KEX2P13134 814 aa2.74□□□□□ -1.97
VPS13YLL040C VPS60Q03390 229 aa2.74□□□□□ -1.97
VPS13YLL040C RPB2P08518 1224 aaKnown RBP2.74□□□□□ -1.97
VPS13YLL040C TPM2P40414 161 aa2.74□□□□□ -1.97
VPS13YLL040C YGL242CP53066 181 aa2.74□□□□□ -1.97
VPS13YLL040C RPL19AP0CX82 189 aaKnown RBP2.74□□□□□ -1.97
VPS13YLL040C RPL19BP0CX83 189 aaPredicted RBP2.74□□□□□ -1.97
VPS13YLL040C BMH1P29311 267 aaKnown RBP2.74□□□□□ -1.97
VPS13YLL040C IOC3P43596 787 aa2.74□□□□□ -1.97
VPS13YLL040C CYB2P00175 591 aa2.74□□□□□ -1.97
VPS13YLL040C SET3P36124 751 aa2.74□□□□□ -1.97
VPS13YLL040C PSF3Q12146 194 aa2.74□□□□□ -1.97
VPS13YLL040C SWI1P09547 1314 aa2.74□□□□□ -1.97
VPS13YLL040C KTR1P27810 393 aaKnown RBP2.74□□□□□ -1.97
VPS13YLL040C NMD2P38798 1089 aaKnown RBP2.74□□□□□ -1.97
VPS13YLL040C MRS2Q01926 470 aa2.74□□□□□ -1.97
VPS13YLL040C BMH2P34730 273 aaKnown RBP2.74□□□□□ -1.97
VPS13YLL040C NPR3P38742 1146 aa2.74□□□□□ -1.97
VPS13YLL040C CDC10P25342 322 aaKnown RBP2.73□□□□□ -1.97
VPS13YLL040C COG4Q06096 861 aa2.73□□□□□ -1.97
VPS13YLL040C MRD1Q06106 887 aaKnown RBP2.73□□□□□ -1.97
VPS13YLL040C HXT1P32465 570 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms