RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCK1	YKR097W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
PCK1	YKR097W	TSC13	Q99190	310 aa		4.79	□□□□□ -1.64
PCK1	YKR097W	ACO2	P39533	789 aa		4.78	□□□□□ -1.64
PCK1	YKR097W	ROM1	P53046	1155 aa		4.78	□□□□□ -1.64
PCK1	YKR097W	CAF120	P53836	1060 aa		4.78	□□□□□ -1.64
PCK1	YKR097W	NOP8	Q08287	484 aa	Predicted RBP	4.78	□□□□□ -1.64
PCK1	YKR097W	HDA3	Q06623	655 aa		4.77	□□□□□ -1.65
PCK1	YKR097W	TCB1	Q12466	1186 aa		4.77	□□□□□ -1.65
PCK1	YKR097W	PDI1	P17967	522 aa	Known RBP	4.77	□□□□□ -1.65
PCK1	YKR097W	TBS1	P38114	1094 aa		4.77	□□□□□ -1.65
PCK1	YKR097W	CWC15	Q03772	175 aa	Known RBP	4.77	□□□□□ -1.65
PCK1	YKR097W	DAT1	P13483	248 aa	Known RBP	4.76	□□□□□ -1.65
PCK1	YKR097W	AIM9	P40053	627 aa	Known RBP	4.76	□□□□□ -1.65
PCK1	YKR097W	PUF6	Q04373	656 aa	Known RBP	4.76	□□□□□ -1.65
PCK1	YKR097W	TY1A-BL	Q12266	440 aa		4.76	□□□□□ -1.65
PCK1	YKR097W	UTR2	P32623	467 aa		4.75	□□□□□ -1.65
PCK1	YKR097W	GAS4	Q08271	471 aa		4.75	□□□□□ -1.65
PCK1	YKR097W	YDL176W	Q12027	708 aa		4.75	□□□□□ -1.65
PCK1	YKR097W	SPT2	P06843	333 aa	Predicted RBP	4.74	□□□□□ -1.65
PCK1	YKR097W	TPS3	P38426	1054 aa	Known RBP	4.74	□□□□□ -1.65
PCK1	YKR097W	YFL034W	P43564	1073 aa		4.74	□□□□□ -1.65
PCK1	YKR097W	OSH7	P38755	437 aa		4.73	□□□□□ -1.65
PCK1	YKR097W	NTH2	P35172	780 aa		4.73	□□□□□ -1.65
PCK1	YKR097W	YIR007W	P40566	764 aa		4.72	□□□□□ -1.65
PCK1	YKR097W	VTC4	P47075	721 aa		4.72	□□□□□ -1.65
PCK1	YKR097W	WTM2	Q12206	467 aa		4.72	□□□□□ -1.65
PCK1	YKR097W	HAT1	Q12341	374 aa		4.72	□□□□□ -1.65
PCK1	YKR097W	SWI5	P08153	709 aa		4.71	□□□□□ -1.66
PCK1	YKR097W	SSF1	P38789	453 aa	Predicted RBP	4.71	□□□□□ -1.66
PCK1	YKR097W	YGR035C	P53222	116 aa		4.71	□□□□□ -1.66
PCK1	YKR097W	RPS6A	P0CX37	236 aa	Known RBP	4.7	□□□□□ -1.66
PCK1	YKR097W	RPS6B	P0CX38	236 aa	Predicted RBP	4.7	□□□□□ -1.66
PCK1	YKR097W	VAN1	P23642	535 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	UBP1	P25037	809 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	SRS2	P12954	1174 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	DAL1	P32375	460 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	SUV3	P32580	737 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	PNP1	Q05788	311 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	PUN1	Q06991	263 aa		4.7	□□□□□ -1.66
PCK1	YKR097W	NGR1	P32831	672 aa	Known RBP	4.69	□□□□□ -1.66
PCK1	YKR097W	AHP1	P38013	176 aa	Known RBP	4.69	□□□□□ -1.66
PCK1	YKR097W	ROG3	P43602	733 aa		4.69	□□□□□ -1.66
PCK1	YKR097W	MSN5	P52918	1224 aa		4.69	□□□□□ -1.66
PCK1	YKR097W	TY1A-MR1	Q04215	440 aa		4.69	□□□□□ -1.66
PCK1	YKR097W	CYT1	P07143	309 aa		4.68	□□□□□ -1.66
PCK1	YKR097W	TRL1	P09880	827 aa	Known RBP	4.68	□□□□□ -1.66
PCK1	YKR097W	ALA1	P40825	983 aa	Known RBP	4.68	□□□□□ -1.66
PCK1	YKR097W	TRS33	Q99394	268 aa		4.68	□□□□□ -1.66
PCK1	YKR097W	CDC19	P00549	500 aa	Known RBP	4.67	□□□□□ -1.66
PCK1	YKR097W	SLD2	P34252	453 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	ALD4	P46367	519 aa	Known RBP	4.67	□□□□□ -1.66
PCK1	YKR097W	SEN54	Q02825	467 aa	Predicted RBP	4.67	□□□□□ -1.66
PCK1	YKR097W	KAR5	Q04746	504 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	TRK2	P28584	889 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	BOL3	P39724	118 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	LYS5	P50113	272 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	DPH6	Q12429	685 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	YBL113C	Q7M4S9	792 aa		4.67	□□□□□ -1.66
PCK1	YKR097W	ERP5	P38819	212 aa		4.66	□□□□□ -1.66
PCK1	YKR097W	HPF1	Q05164	967 aa		4.66	□□□□□ -1.66
PCK1	YKR097W	YPQ2	Q06328	317 aa		4.66	□□□□□ -1.66
PCK1	YKR097W	FUR4	P05316	633 aa	Known RBP	4.65	□□□□□ -1.66
PCK1	YKR097W	UTP7	P40055	554 aa	Known RBP	4.65	□□□□□ -1.66
PCK1	YKR097W	MDJ2	P42834	146 aa		4.65	□□□□□ -1.66
PCK1	YKR097W	SUM1	P46676	1062 aa		4.65	□□□□□ -1.66
PCK1	YKR097W	UBP15	P50101	1230 aa		4.65	□□□□□ -1.66
PCK1	YKR097W	CWH41	P53008	833 aa		4.65	□□□□□ -1.66
PCK1	YKR097W	YBR197C	P38306	217 aa		4.64	□□□□□ -1.67
PCK1	YKR097W	SSN3	P39073	555 aa		4.64	□□□□□ -1.67
PCK1	YKR097W	LSO1	Q3E827	93 aa		4.64	□□□□□ -1.67
PCK1	YKR097W	MCM1	P11746	286 aa		4.63	□□□□□ -1.67
PCK1	YKR097W	RRN6	P32786	894 aa		4.63	□□□□□ -1.67
PCK1	YKR097W	HXT5	P38695	592 aa		4.63	□□□□□ -1.67
PCK1	YKR097W	STM1	P39015	273 aa	Known RBP	4.63	□□□□□ -1.67
PCK1	YKR097W	CEM1	P39525	442 aa		4.63	□□□□□ -1.67
PCK1	YKR097W	ATG1	P53104	897 aa		4.63	□□□□□ -1.67
PCK1	YKR097W	CAB1	Q04430	367 aa		4.63	□□□□□ -1.67
PCK1	YKR097W	ACF4	P47129	309 aa		4.62	□□□□□ -1.67
PCK1	YKR097W	NAM8	Q00539	523 aa	Known RBP	4.62	□□□□□ -1.67
PCK1	YKR097W	YMR265C	Q03508	461 aa	Known RBP	4.62	□□□□□ -1.67
PCK1	YKR097W	HEM3	P28789	327 aa		4.61	□□□□□ -1.67
PCK1	YKR097W	BOI1	P38041	980 aa	Known RBP	4.61	□□□□□ -1.67
PCK1	YKR097W	QDR1	P40475	563 aa		4.61	□□□□□ -1.67
PCK1	YKR097W	MSC6	Q08818	692 aa	Known RBP	4.61	□□□□□ -1.67
PCK1	YKR097W	CCP1	P00431	361 aa		4.61	□□□□□ -1.67
PCK1	YKR097W	GRS1	P38088	690 aa	Known RBP	4.61	□□□□□ -1.67
PCK1	YKR097W	IPL1	P38991	367 aa		4.61	□□□□□ -1.67
PCK1	YKR097W	JJJ2	P46997	583 aa		4.61	□□□□□ -1.67
PCK1	YKR097W	CUZ1	P53899	274 aa		4.61	□□□□□ -1.67
PCK1	YKR097W	IRE1	P32361	1115 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	ISC10	P32645	267 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	SLA1	P32790	1244 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	GLO3	P38682	493 aa	Known RBP	4.6	□□□□□ -1.67
PCK1	YKR097W	YHL050C	P38721	697 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	YHR219W	P38900	624 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	YTA6	P40328	754 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	APC11	Q12157	165 aa		4.6	□□□□□ -1.67
PCK1	YKR097W	DIT1	P21623	536 aa		4.59	□□□□□ -1.67
PCK1	YKR097W	SEC20	P28791	383 aa		4.59	□□□□□ -1.67
PCK1	YKR097W	JJJ3	P47138	172 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms