RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	LEM3	P42838	414 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	YJR008W	P47085	338 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	RTS3	P53289	263 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	GEF1	P37020	779 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	PAC1	P39946	494 aa	Known RBP	4.15	□□□□□ -1.75
PEX1	YKL197C	RTF1	P53064	558 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	ECM16	Q04217	1267 aa	Known RBP	4.15	□□□□□ -1.75
PEX1	YKL197C	YMR196W	Q04336	1088 aa		4.15	□□□□□ -1.75
PEX1	YKL197C	TYW1	Q08960	810 aa	Known RBP	4.15	□□□□□ -1.75
PEX1	YKL197C	SEC20	P28791	383 aa		4.14	□□□□□ -1.75
PEX1	YKL197C	VPS4	P52917	437 aa		4.14	□□□□□ -1.75
PEX1	YKL197C	TUB4	P53378	473 aa		4.14	□□□□□ -1.75
PEX1	YKL197C	YTA7	P40340	1379 aa		4.14	□□□□□ -1.75
PEX1	YKL197C	SPC42	P36094	363 aa		4.14	□□□□□ -1.75
PEX1	YKL197C	YNL115C	P53925	644 aa		4.14	□□□□□ -1.75
PEX1	YKL197C	NNF2	P53253	936 aa		4.13	□□□□□ -1.75
PEX1	YKL197C	VTH1	P40438	1549 aa		4.13	□□□□□ -1.75
PEX1	YKL197C	VTH2	P40890	1549 aa		4.13	□□□□□ -1.75
PEX1	YKL197C	SUP35	P05453	685 aa	Known RBP	4.13	□□□□□ -1.75
PEX1	YKL197C	PEA2	P40091	420 aa		4.13	□□□□□ -1.75
PEX1	YKL197C	PKH1	Q03407	766 aa		4.13	□□□□□ -1.75
PEX1	YKL197C	SEC3	P33332	1336 aa	Known RBP	4.13	□□□□□ -1.75
PEX1	YKL197C	RAS1	P01119	309 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	YJU3	P28321	313 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	RRP14	P36080	434 aa	Known RBP	4.12	□□□□□ -1.75
PEX1	YKL197C	SRC1	Q03707	834 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	RAD2	P07276	1031 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	AIM21	P40563	679 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	ATF2	P53296	535 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	PSK2	Q08217	1101 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	SNQ2	P32568	1501 aa	Known RBP	4.12	□□□□□ -1.75
PEX1	YKL197C	HOS4	P40480	1083 aa		4.12	□□□□□ -1.75
PEX1	YKL197C	SSA4	P22202	642 aa	Known RBP	4.11	□□□□□ -1.75
PEX1	YKL197C	RAD51	P25454	400 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	SAS4	Q04003	481 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	CST6	P40535	587 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	DJP1	P40564	432 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	LTE1	P07866	1435 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	SPP41	P38904	1435 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	SNT2	P53127	1403 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	IRC20	Q06554	1556 aa		4.11	□□□□□ -1.75
PEX1	YKL197C	ESS1	P22696	170 aa		4.1	□□□□□ -1.75
PEX1	YKL197C	GCD11	P32481	527 aa	Known RBP	4.1	□□□□□ -1.75
PEX1	YKL197C	ULS1	Q08562	1619 aa		4.1	□□□□□ -1.75
PEX1	YKL197C	MSH3	P25336	1018 aa		4.1	□□□□□ -1.75
PEX1	YKL197C	MTR4	P47047	1073 aa	Known RBP	4.1	□□□□□ -1.75
PEX1	YKL197C	TY4A-J	P47023	414 aa		4.1	□□□□□ -1.75
PEX1	YKL197C	RCF1	Q03713	159 aa		4.1	□□□□□ -1.75
PEX1	YKL197C	CFT2	Q12102	859 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX1	YKL197C	PDR12	Q02785	1511 aa		4.09	□□□□□ -1.75
PEX1	YKL197C	RRN7	P40992	514 aa		4.09	□□□□□ -1.75
PEX1	YKL197C	TAF1	P46677	1066 aa		4.09	□□□□□ -1.75
PEX1	YKL197C	GDE1	Q02979	1223 aa		4.09	□□□□□ -1.75
PEX1	YKL197C	GAL11	P19659	1081 aa		4.09	□□□□□ -1.75
PEX1	YKL197C	PIM1	P36775	1133 aa		4.09	□□□□□ -1.75
PEX1	YKL197C	RIX1	P38883	763 aa	Predicted RBP	4.09	□□□□□ -1.75
PEX1	YKL197C	RPT2	P40327	437 aa	Known RBP	4.09	□□□□□ -1.75
PEX1	YKL197C	RPN7	Q06103	429 aa	Known RBP	4.09	□□□□□ -1.75
PEX1	YKL197C	RIX7	Q07844	837 aa	Known RBP	4.09	□□□□□ -1.75
PEX1	YKL197C	BNI1	P41832	1953 aa		4.09	□□□□□ -1.76
PEX1	YKL197C	TSC11	P40061	1430 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	NMD3	P38861	518 aa	Known RBP	4.08	□□□□□ -1.76
PEX1	YKL197C	AIM20	P40451	204 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	CSN12	P47130	423 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	GIR2	Q03768	265 aa	Predicted RBP	4.08	□□□□□ -1.76
PEX1	YKL197C	CLF1	Q12309	687 aa	Predicted RBP	4.08	□□□□□ -1.76
PEX1	YKL197C	SPO14	P36126	1683 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	SLY41	P22215	453 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	CDC11	P32458	415 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	GYP1	Q08484	637 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	RPA135	P22138	1203 aa	Known RBP	4.08	□□□□□ -1.76
PEX1	YKL197C	GLN1	P32288	370 aa	Known RBP	4.08	□□□□□ -1.76
PEX1	YKL197C	RSC8	P43609	557 aa	Known RBP	4.08	□□□□□ -1.76
PEX1	YKL197C	MMP1	Q12372	583 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	VPS5	Q92331	675 aa		4.08	□□□□□ -1.76
PEX1	YKL197C	TRM1	P15565	570 aa	Known RBP	4.07	□□□□□ -1.76
PEX1	YKL197C	TPD3	P31383	635 aa		4.07	□□□□□ -1.76
PEX1	YKL197C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PEX1	YKL197C	CLA4	P48562	842 aa		4.07	□□□□□ -1.76
PEX1	YKL197C	APL5	Q08951	932 aa	Known RBP	4.07	□□□□□ -1.76
PEX1	YKL197C	NPL4	P33755	580 aa		4.07	□□□□□ -1.76
PEX1	YKL197C	MEH1	Q02205	184 aa		4.07	□□□□□ -1.76
PEX1	YKL197C	YLR257W	Q06146	321 aa	Known RBP	4.07	□□□□□ -1.76
PEX1	YKL197C	PDC1	P06169	563 aa	Known RBP	4.06	□□□□□ -1.76
PEX1	YKL197C	MPE1	P35728	441 aa	Known RBP	4.06	□□□□□ -1.76
PEX1	YKL197C	SIC1	P38634	284 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	FAF1	P40546	346 aa	Predicted RBP	4.06	□□□□□ -1.76
PEX1	YKL197C	YLL054C	Q12244	843 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	AMS1	P22855	1083 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	DEP1	P31385	405 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PEX1	YKL197C	BDP1	P46678	594 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	YDR341C	Q05506	607 aa	Known RBP	4.06	□□□□□ -1.76
PEX1	YKL197C	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	CLC1	P17891	233 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	PKC1	P24583	1151 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	UBP1	P25037	809 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	NFU1	P32860	256 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	SAP190	P36123	1033 aa		4.06	□□□□□ -1.76
PEX1	YKL197C	NUP159	P40477	1460 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms