RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W CWC15Q03772 175 aaKnown RBP8.17□□□□□ -1.1
SPC42YKL042W GAS4Q08271 471 aa8.17□□□□□ -1.1
SPC42YKL042W TSC13Q99190 310 aa8.17□□□□□ -1.1
SPC42YKL042W ERP5P38819 212 aa8.16□□□□□ -1.1
SPC42YKL042W ROM1P53046 1155 aa8.16□□□□□ -1.1
SPC42YKL042W YGR035CP53222 116 aa8.16□□□□□ -1.1
SPC42YKL042W LSC2P53312 427 aa8.16□□□□□ -1.1
SPC42YKL042W APP1P53933 587 aa8.16□□□□□ -1.1
SPC42YKL042W PDI1P17967 522 aaKnown RBP8.15□□□□□ -1.1
SPC42YKL042W SNU71P53207 620 aaKnown RBP8.15□□□□□ -1.1
SPC42YKL042W ISR1Q06098 443 aaKnown RBP8.15□□□□□ -1.1
SPC42YKL042W NOP7P53261 605 aaKnown RBP8.14□□□□□ -1.11
SPC42YKL042W UBP2Q01476 1272 aa8.14□□□□□ -1.11
SPC42YKL042W HPF1Q05164 967 aa8.14□□□□□ -1.11
SPC42YKL042W SEC20P28791 383 aa8.13□□□□□ -1.11
SPC42YKL042W EMW1P42842 904 aaKnown RBP8.13□□□□□ -1.11
SPC42YKL042W YFL034WP43564 1073 aa8.13□□□□□ -1.11
SPC42YKL042W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
SPC42YKL042W DLD1P32891 587 aa8.12□□□□□ -1.11
SPC42YKL042W HAL5P38970 855 aaKnown RBP8.12□□□□□ -1.11
SPC42YKL042W IPL1P38991 367 aa8.12□□□□□ -1.11
SPC42YKL042W PNP1Q05788 311 aa8.12□□□□□ -1.11
SPC42YKL042W VAN1P23642 535 aa8.11□□□□□ -1.11
SPC42YKL042W YJR098CP47139 656 aa8.11□□□□□ -1.11
SPC42YKL042W PUN1Q06991 263 aa8.11□□□□□ -1.11
SPC42YKL042W ATG20Q07528 640 aa8.11□□□□□ -1.11
SPC42YKL042W SRS2P12954 1174 aa8.1□□□□□ -1.11
SPC42YKL042W AIM9P40053 627 aaKnown RBP8.1□□□□□ -1.11
SPC42YKL042W MTC5Q03897 1148 aa8.1□□□□□ -1.11
SPC42YKL042W RRN6P32786 894 aa8.09□□□□□ -1.11
SPC42YKL042W GRS1P38088 690 aaKnown RBP8.09□□□□□ -1.11
SPC42YKL042W HDA3Q06623 655 aa8.09□□□□□ -1.11
SPC42YKL042W TCB1Q12466 1186 aa8.09□□□□□ -1.11
SPC42YKL042W TRL1P09880 827 aaKnown RBP8.08□□□□□ -1.12
SPC42YKL042W ASF1P32447 279 aa8.08□□□□□ -1.12
SPC42YKL042W MSC6Q08818 692 aaKnown RBP8.08□□□□□ -1.12
SPC42YKL042W TRS33Q99394 268 aa8.08□□□□□ -1.12
SPC42YKL042W FUR4P05316 633 aaKnown RBP8.07□□□□□ -1.12
SPC42YKL042W BOL3P39724 118 aa8.07□□□□□ -1.12
SPC42YKL042W ATG1P53104 897 aa8.07□□□□□ -1.12
SPC42YKL042W YHL050CP38721 697 aa8.06□□□□□ -1.12
SPC42YKL042W YHR219WP38900 624 aa8.06□□□□□ -1.12
SPC42YKL042W MDJ2P42834 146 aa8.06□□□□□ -1.12
SPC42YKL042W NTH2P35172 780 aa8.05□□□□□ -1.12
SPC42YKL042W OSH7P38755 437 aa8.04□□□□□ -1.12
SPC42YKL042W ALD4P46367 519 aaKnown RBP8.04□□□□□ -1.12
SPC42YKL042W MKS1P34072 584 aa8.03□□□□□ -1.12
SPC42YKL042W GLO3P38682 493 aaKnown RBP8.03□□□□□ -1.12
SPC42YKL042W DFG5Q05031 458 aa8.03□□□□□ -1.12
SPC42YKL042W CYT1P07143 309 aa8.02□□□□□ -1.13
SPC42YKL042W UBP1P25037 809 aa8.02□□□□□ -1.13
SPC42YKL042W ROG3P43602 733 aa8.02□□□□□ -1.13
SPC42YKL042W CWH41P53008 833 aa8.02□□□□□ -1.13
SPC42YKL042W RPS6AP0CX37 236 aaKnown RBP8.01□□□□□ -1.13
SPC42YKL042W RPS6BP0CX38 236 aaPredicted RBP8.01□□□□□ -1.13
SPC42YKL042W PAM1P37304 830 aaKnown RBP8.01□□□□□ -1.13
SPC42YKL042W PPX1P38698 397 aa8.01□□□□□ -1.13
SPC42YKL042W QDR1P40475 563 aa8.01□□□□□ -1.13
SPC42YKL042W TY1A-MR1Q04215 440 aa8.01□□□□□ -1.13
SPC42YKL042W UTR2P32623 467 aa8□□□□□ -1.13
SPC42YKL042W THI12P42883 340 aa8□□□□□ -1.13
SPC42YKL042W THI5P43534 340 aa8□□□□□ -1.13
SPC42YKL042W THI11P47183 340 aa8□□□□□ -1.13
SPC42YKL042W THI13Q07748 340 aa8□□□□□ -1.13
SPC42YKL042W SWI5P08153 709 aa7.99□□□□□ -1.13
SPC42YKL042W SUV3P32580 737 aa7.99□□□□□ -1.13
SPC42YKL042W MET10P39692 1035 aa7.99□□□□□ -1.13
SPC42YKL042W ACF4P47129 309 aa7.99□□□□□ -1.13
SPC42YKL042W ISU1Q03020 165 aa7.99□□□□□ -1.13
SPC42YKL042W CCP1P00431 361 aa7.98□□□□□ -1.13
SPC42YKL042W SPT2P06843 333 aaPredicted RBP7.98□□□□□ -1.13
SPC42YKL042W FBP26P32604 452 aa7.98□□□□□ -1.13
SPC42YKL042W POL32P47110 350 aa7.98□□□□□ -1.13
SPC42YKL042W BDS1Q08347 646 aa7.98□□□□□ -1.13
SPC42YKL042W NUT2Q06213 157 aa7.97□□□□□ -1.13
SPC42YKL042W DAT1P13483 248 aaKnown RBP7.96□□□□□ -1.14
SPC42YKL042W NGR1P32831 672 aaKnown RBP7.96□□□□□ -1.14
SPC42YKL042W TBS1P38114 1094 aa7.96□□□□□ -1.14
SPC42YKL042W ALD2P47771 506 aa7.96□□□□□ -1.14
SPC42YKL042W WHI5Q12416 295 aa7.96□□□□□ -1.14
SPC42YKL042W LSO1Q3E827 93 aa7.96□□□□□ -1.14
SPC42YKL042W AIM44Q99299 758 aa7.96□□□□□ -1.14
SPC42YKL042W DPH6Q12429 685 aa7.95□□□□□ -1.14
SPC42YKL042W FRT1Q99332 602 aa7.95□□□□□ -1.14
SPC42YKL042W RRP15Q06511 250 aaPredicted RBP7.94□□□□□ -1.14
SPC42YKL042W RPP2BP02400 110 aaKnown RBP7.93□□□□□ -1.14
SPC42YKL042W STE6P12866 1290 aa7.93□□□□□ -1.14
SPC42YKL042W ATE1P16639 503 aa7.93□□□□□ -1.14
SPC42YKL042W ICP55P40051 511 aa7.93□□□□□ -1.14
SPC42YKL042W FOX2Q02207 900 aaKnown RBP7.93□□□□□ -1.14
SPC42YKL042W BOI1P38041 980 aaKnown RBP7.92□□□□□ -1.14
SPC42YKL042W SPR3P41901 512 aa7.92□□□□□ -1.14
SPC42YKL042W ISC10P32645 267 aa7.91□□□□□ -1.14
SPC42YKL042W YBR197CP38306 217 aa7.91□□□□□ -1.14
SPC42YKL042W ORC1P54784 914 aaPredicted RBP7.91□□□□□ -1.14
SPC42YKL042W NAM8Q00539 523 aaKnown RBP7.91□□□□□ -1.14
SPC42YKL042W LYS5P50113 272 aa7.9□□□□□ -1.14
SPC42YKL042W CAB1Q04430 367 aa7.9□□□□□ -1.14
SPC42YKL042W WTM2Q12206 467 aa7.9□□□□□ -1.14
SPC42YKL042W CDC19P00549 500 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms