RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A SUM1P46676 1062 aa6.31□□□□□ -1.4
SFT1YKL006C-A TTI1P36097 1038 aa6.3□□□□□ -1.4
SFT1YKL006C-A SSN3P39073 555 aa6.3□□□□□ -1.4
SFT1YKL006C-A RGA1P39083 1007 aa6.3□□□□□ -1.4
SFT1YKL006C-A MSN5P52918 1224 aa6.3□□□□□ -1.4
SFT1YKL006C-A RPS6AP0CX37 236 aaKnown RBP6.29□□□□□ -1.4
SFT1YKL006C-A RPS6BP0CX38 236 aaPredicted RBP6.29□□□□□ -1.4
SFT1YKL006C-A AHP1P38013 176 aaKnown RBP6.29□□□□□ -1.4
SFT1YKL006C-A VTC4P47075 721 aa6.29□□□□□ -1.4
SFT1YKL006C-A CPS1P27614 576 aa6.28□□□□□ -1.4
SFT1YKL006C-A ROG3P43602 733 aa6.28□□□□□ -1.4
SFT1YKL006C-A HAP4P14064 554 aa6.27□□□□□ -1.41
SFT1YKL006C-A PHO87P25360 923 aa6.27□□□□□ -1.41
SFT1YKL006C-A ACS2P52910 683 aaKnown RBP6.27□□□□□ -1.41
SFT1YKL006C-A TY1A-MR1Q04215 440 aa6.27□□□□□ -1.41
SFT1YKL006C-A CDC19P00549 500 aaKnown RBP6.26□□□□□ -1.41
SFT1YKL006C-A GAL2P13181 574 aa6.26□□□□□ -1.41
SFT1YKL006C-A TGL4P36165 910 aa6.26□□□□□ -1.41
SFT1YKL006C-A ECM23Q02710 187 aa6.26□□□□□ -1.41
SFT1YKL006C-A RLF2Q12495 606 aa6.25□□□□□ -1.41
SFT1YKL006C-A CYT1P07143 309 aa6.24□□□□□ -1.41
SFT1YKL006C-A UBP15P50101 1230 aa6.24□□□□□ -1.41
SFT1YKL006C-A NAM8Q00539 523 aaKnown RBP6.24□□□□□ -1.41
SFT1YKL006C-A IRE1P32361 1115 aa6.23□□□□□ -1.41
SFT1YKL006C-A SLA1P32790 1244 aa6.23□□□□□ -1.41
SFT1YKL006C-A JJJ2P46997 583 aa6.23□□□□□ -1.41
SFT1YKL006C-A YGR035CP53222 116 aa6.23□□□□□ -1.41
SFT1YKL006C-A GAS4Q08271 471 aa6.23□□□□□ -1.41
SFT1YKL006C-A SSA4P22202 642 aaKnown RBP6.22□□□□□ -1.41
SFT1YKL006C-A UBX7P38349 436 aa6.21□□□□□ -1.42
SFT1YKL006C-A HPF1Q05164 967 aa6.21□□□□□ -1.42
SFT1YKL006C-A YPQ2Q06328 317 aa6.21□□□□□ -1.42
SFT1YKL006C-A TY1A-DR3Q12441 440 aa6.21□□□□□ -1.42
SFT1YKL006C-A VAN1P23642 535 aa6.2□□□□□ -1.42
SFT1YKL006C-A ROM1P53046 1155 aa6.19□□□□□ -1.42
SFT1YKL006C-A CUZ1P53899 274 aa6.19□□□□□ -1.42
SFT1YKL006C-A YMR265CQ03508 461 aaKnown RBP6.19□□□□□ -1.42
SFT1YKL006C-A CCP1P00431 361 aa6.18□□□□□ -1.42
SFT1YKL006C-A PUP1P25043 261 aa6.18□□□□□ -1.42
SFT1YKL006C-A SHM1P37292 490 aaPredicted RBP6.18□□□□□ -1.42
SFT1YKL006C-A YTA6P40328 754 aa6.18□□□□□ -1.42
SFT1YKL006C-A Q0182Q9ZZW1 134 aa6.18□□□□□ -1.42
SFT1YKL006C-A MCM1P11746 286 aa6.17□□□□□ -1.42
SFT1YKL006C-A TRK2P28584 889 aa6.17□□□□□ -1.42
SFT1YKL006C-A CEM1P39525 442 aa6.17□□□□□ -1.42
SFT1YKL006C-A LYS5P50113 272 aa6.17□□□□□ -1.42
SFT1YKL006C-A CWH41P53008 833 aa6.17□□□□□ -1.42
SFT1YKL006C-A DIT1P21623 536 aa6.16□□□□□ -1.42
SFT1YKL006C-A PDC6P26263 563 aaKnown RBP6.16□□□□□ -1.42
SFT1YKL006C-A KRE33P53914 1056 aaKnown RBP6.16□□□□□ -1.42
SFT1YKL006C-A RPS31P05759 152 aaKnown RBP6.15□□□□□ -1.42
SFT1YKL006C-A ADE12P80210 433 aaKnown RBP6.15□□□□□ -1.42
SFT1YKL006C-A PSH1Q12161 406 aa6.15□□□□□ -1.42
SFT1YKL006C-A DPH6Q12429 685 aa6.15□□□□□ -1.42
SFT1YKL006C-A TRS33Q99394 268 aa6.15□□□□□ -1.42
SFT1YKL006C-A NGR1P32831 672 aaKnown RBP6.14□□□□□ -1.43
SFT1YKL006C-A MRPL16P38064 232 aa6.14□□□□□ -1.43
SFT1YKL006C-A YNL165WP53891 406 aa6.14□□□□□ -1.43
SFT1YKL006C-A UBP1P25037 809 aa6.13□□□□□ -1.43
SFT1YKL006C-A MLF3P32047 452 aa6.13□□□□□ -1.43
SFT1YKL006C-A YML083CQ04526 418 aa6.12□□□□□ -1.43
SFT1YKL006C-A NOB1Q08444 459 aaKnown RBP6.12□□□□□ -1.43
SFT1YKL006C-A STB3Q12427 513 aa6.12□□□□□ -1.43
SFT1YKL006C-A PUN1Q06991 263 aa6.11□□□□□ -1.43
SFT1YKL006C-A FPS1P23900 669 aa6.1□□□□□ -1.43
SFT1YKL006C-A SCD5P34758 872 aa6.1□□□□□ -1.43
SFT1YKL006C-A MTO1P53070 669 aa6.1□□□□□ -1.43
SFT1YKL006C-A PUF6Q04373 656 aaKnown RBP6.1□□□□□ -1.43
SFT1YKL006C-A SYT1Q06836 1226 aa6.1□□□□□ -1.43
SFT1YKL006C-A SUB2Q07478 446 aaKnown RBP6.1□□□□□ -1.43
SFT1YKL006C-A LEU1P07264 779 aaKnown RBP6.09□□□□□ -1.43
SFT1YKL006C-A YDR461C-AQ2V2P7 80 aa6.08□□□□□ -1.44
SFT1YKL006C-A RPP1AP05318 106 aaPredicted RBP6.07□□□□□ -1.44
SFT1YKL006C-A RGP1P16664 663 aa6.07□□□□□ -1.44
SFT1YKL006C-A HXT5P38695 592 aa6.07□□□□□ -1.44
SFT1YKL006C-A SPR3P41901 512 aa6.07□□□□□ -1.44
SFT1YKL006C-A JJJ3P47138 172 aa6.07□□□□□ -1.44
SFT1YKL006C-A FOX2Q02207 900 aaKnown RBP6.07□□□□□ -1.44
SFT1YKL006C-A SUV3P32580 737 aa6.06□□□□□ -1.44
SFT1YKL006C-A KAP122P32767 1081 aa6.06□□□□□ -1.44
SFT1YKL006C-A ALD2P47771 506 aa6.06□□□□□ -1.44
SFT1YKL006C-A UTP4Q06679 776 aaKnown RBP6.06□□□□□ -1.44
SFT1YKL006C-A ALD4P46367 519 aaKnown RBP6.05□□□□□ -1.44
SFT1YKL006C-A SRS2P12954 1174 aa6.04□□□□□ -1.44
SFT1YKL006C-A RPL34AP87262 121 aaPredicted RBP6.04□□□□□ -1.44
SFT1YKL006C-A YBR197CP38306 217 aa6.03□□□□□ -1.44
SFT1YKL006C-A QDR2P40474 542 aa6.03□□□□□ -1.44
SFT1YKL006C-A CWC15Q03772 175 aaKnown RBP6.03□□□□□ -1.44
SFT1YKL006C-A CAB1Q04430 367 aa6.03□□□□□ -1.44
SFT1YKL006C-A THI72Q08579 599 aa6.03□□□□□ -1.44
SFT1YKL006C-A RGA2Q06407 1009 aa6.02□□□□□ -1.45
SFT1YKL006C-A AI1P03875 834 aa6.01□□□□□ -1.45
SFT1YKL006C-A MRPL33P20084 86 aa6.01□□□□□ -1.45
SFT1YKL006C-A ISC10P32645 267 aa6.01□□□□□ -1.45
SFT1YKL006C-A RRN6P32786 894 aa6.01□□□□□ -1.45
SFT1YKL006C-A PNP1Q05788 311 aa6.01□□□□□ -1.45
SFT1YKL006C-A VMA3P25515 160 aa6□□□□□ -1.45
SFT1YKL006C-A MDJ1P35191 511 aa6□□□□□ -1.45
SFT1YKL006C-A NCL1P38205 684 aaKnown RBP6□□□□□ -1.45
SFT1YKL006C-A CUS1Q02554 436 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 94.9 ms