RNA–Protein interactions for RNA: YIL135C

VHS2, Transcript of Regulator of septin dynamics, yeastyeast

Gene VHS2, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS2YIL135C WTM2Q12206 467 aa7.7□□□□□ -1.18
VHS2YIL135C TY1A-DR3Q12441 440 aa7.69□□□□□ -1.18
VHS2YIL135C NAF1P53919 492 aaKnown RBP7.68□□□□□ -1.18
VHS2YIL135C DAT1P13483 248 aaKnown RBP7.67□□□□□ -1.18
VHS2YIL135C HPC2Q01448 625 aa7.67□□□□□ -1.18
VHS2YIL135C MDS3P53094 1487 aa7.67□□□□□ -1.18
VHS2YIL135C YNR014WP53719 212 aa7.66□□□□□ -1.18
VHS2YIL135C HSL1P34244 1518 aa7.66□□□□□ -1.18
VHS2YIL135C BUD4P47136 1447 aa7.65□□□□□ -1.18
VHS2YIL135C SPT6P23615 1451 aaKnown RBP7.65□□□□□ -1.18
VHS2YIL135C TFB3Q03290 321 aa7.65□□□□□ -1.18
VHS2YIL135C ISR1Q06098 443 aaKnown RBP7.65□□□□□ -1.18
VHS2YIL135C THO2P53552 1597 aaKnown RBP7.64□□□□□ -1.19
VHS2YIL135C AHP1P38013 176 aaKnown RBP7.64□□□□□ -1.19
VHS2YIL135C PKC1P24583 1151 aa7.63□□□□□ -1.19
VHS2YIL135C UTR2P32623 467 aa7.62□□□□□ -1.19
VHS2YIL135C MCX1P38323 520 aaPredicted RBP7.62□□□□□ -1.19
VHS2YIL135C SPT2P06843 333 aaPredicted RBP7.61□□□□□ -1.19
VHS2YIL135C UTP7P40055 554 aaKnown RBP7.61□□□□□ -1.19
VHS2YIL135C BRL1P38770 471 aa7.59□□□□□ -1.19
VHS2YIL135C EMP47P43555 445 aa7.59□□□□□ -1.19
VHS2YIL135C GPM1P00950 247 aaKnown RBP7.58□□□□□ -1.2
VHS2YIL135C YCK2P23292 546 aaKnown RBP7.58□□□□□ -1.2
VHS2YIL135C ISF1P32488 338 aa7.58□□□□□ -1.2
VHS2YIL135C TBS1P38114 1094 aa7.58□□□□□ -1.2
VHS2YIL135C ALA1P40825 983 aaKnown RBP7.58□□□□□ -1.2
VHS2YIL135C FPS1P23900 669 aa7.57□□□□□ -1.2
VHS2YIL135C BOI2P39969 1040 aa7.57□□□□□ -1.2
VHS2YIL135C APL6P46682 809 aa7.57□□□□□ -1.2
VHS2YIL135C MRX12P47084 519 aa7.57□□□□□ -1.2
VHS2YIL135C YBL036CP38197 257 aa7.55□□□□□ -1.2
VHS2YIL135C CSE4P36012 229 aa7.54□□□□□ -1.2
VHS2YIL135C SLN1P39928 1220 aaPredicted RBP7.54□□□□□ -1.2
VHS2YIL135C SUM1P46676 1062 aa7.54□□□□□ -1.2
VHS2YIL135C YDR215CQ12240 137 aa7.54□□□□□ -1.2
VHS2YIL135C IRE1P32361 1115 aa7.53□□□□□ -1.2
VHS2YIL135C HAL5P38970 855 aaKnown RBP7.53□□□□□ -1.2
VHS2YIL135C JJJ2P46997 583 aa7.53□□□□□ -1.2
VHS2YIL135C MCM16Q12262 181 aa7.52□□□□□ -1.2
VHS2YIL135C AMN1P38285 549 aaPredicted RBP7.52□□□□□ -1.21
VHS2YIL135C BPT1P14772 1559 aa7.51□□□□□ -1.21
VHS2YIL135C PEP1P32319 1579 aa7.51□□□□□ -1.21
VHS2YIL135C YDJ1P25491 409 aaKnown RBP7.51□□□□□ -1.21
VHS2YIL135C SHM1P37292 490 aaPredicted RBP7.51□□□□□ -1.21
VHS2YIL135C MRPL16P38064 232 aa7.51□□□□□ -1.21
VHS2YIL135C MCA1Q08601 432 aa7.51□□□□□ -1.21
VHS2YIL135C BIO2P32451 375 aa7.5□□□□□ -1.21
VHS2YIL135C MET1P36150 593 aa7.5□□□□□ -1.21
VHS2YIL135C SLX8P40072 274 aa7.49□□□□□ -1.21
VHS2YIL135C LSB6P42951 607 aa7.49□□□□□ -1.21
VHS2YIL135C SPT5P27692 1063 aaKnown RBP7.47□□□□□ -1.21
VHS2YIL135C YJL007CP47080 104 aa7.47□□□□□ -1.21
VHS2YIL135C URN1Q06525 465 aaKnown RBP7.47□□□□□ -1.21
VHS2YIL135C PSH1Q12161 406 aa7.47□□□□□ -1.21
VHS2YIL135C PDC5P16467 563 aaKnown RBP7.46□□□□□ -1.22
VHS2YIL135C TAT1P38085 619 aa7.46□□□□□ -1.22
VHS2YIL135C DMA2P53924 522 aa7.46□□□□□ -1.22
VHS2YIL135C STB3Q12427 513 aa7.46□□□□□ -1.22
VHS2YIL135C PDC6P26263 563 aaKnown RBP7.45□□□□□ -1.22
VHS2YIL135C KNS1P32350 737 aaPredicted RBP7.45□□□□□ -1.22
VHS2YIL135C YNL108CP53929 270 aa7.45□□□□□ -1.22
VHS2YIL135C HDA3Q06623 655 aa7.45□□□□□ -1.22
VHS2YIL135C SOH1P38633 127 aa7.44□□□□□ -1.22
VHS2YIL135C HIR3P47171 1648 aa7.43□□□□□ -1.22
VHS2YIL135C SUP45P12385 437 aaKnown RBP7.43□□□□□ -1.22
VHS2YIL135C BIM1P40013 344 aa7.42□□□□□ -1.22
VHS2YIL135C SPR3P41901 512 aa7.42□□□□□ -1.22
VHS2YIL135C TY1A-DR2Q03964 440 aaKnown RBP7.42□□□□□ -1.22
VHS2YIL135C ENO2P00925 437 aaKnown RBP7.41□□□□□ -1.22
VHS2YIL135C HGH1P48362 394 aaKnown RBP7.41□□□□□ -1.22
VHS2YIL135C UTP13Q05946 817 aaKnown RBP7.41□□□□□ -1.22
VHS2YIL135C RPS31P05759 152 aaKnown RBP7.4□□□□□ -1.22
VHS2YIL135C MAC1P35192 417 aa7.4□□□□□ -1.22
VHS2YIL135C ATG32P40458 529 aa7.4□□□□□ -1.22
VHS2YIL135C PRY1P47032 299 aa7.4□□□□□ -1.22
VHS2YIL135C ATG3P40344 310 aa7.39□□□□□ -1.23
VHS2YIL135C YCF1P39109 1515 aaKnown RBP7.37□□□□□ -1.23
VHS2YIL135C TIF1P10081 395 aaKnown RBP7.35□□□□□ -1.23
VHS2YIL135C YPL034WQ03083 165 aa7.35□□□□□ -1.23
VHS2YIL135C BNI1P41832 1953 aa7.34□□□□□ -1.23
VHS2YIL135C RIM21P48565 533 aa7.34□□□□□ -1.23
VHS2YIL135C YPQ2Q06328 317 aa7.34□□□□□ -1.23
VHS2YIL135C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
VHS2YIL135C MYO2P19524 1574 aaKnown RBP7.34□□□□□ -1.23
VHS2YIL135C LEU1P07264 779 aaKnown RBP7.33□□□□□ -1.24
VHS2YIL135C YPP1P46951 817 aa7.33□□□□□ -1.24
VHS2YIL135C ALO1P54783 526 aaKnown RBP7.33□□□□□ -1.24
VHS2YIL135C SGS1P35187 1447 aa7.33□□□□□ -1.24
VHS2YIL135C GLT1Q12680 2145 aaKnown RBP7.33□□□□□ -1.24
VHS2YIL135C SWI5P08153 709 aa7.32□□□□□ -1.24
VHS2YIL135C MSC7P38694 644 aa7.32□□□□□ -1.24
VHS2YIL135C RDS2P19541 446 aaKnown RBP7.31□□□□□ -1.24
VHS2YIL135C ENO1P00924 437 aaKnown RBP7.3□□□□□ -1.24
VHS2YIL135C RTG2P32608 588 aaKnown RBP7.3□□□□□ -1.24
VHS2YIL135C ALD2P47771 506 aa7.3□□□□□ -1.24
VHS2YIL135C ATG2P53855 1592 aa7.3□□□□□ -1.24
VHS2YIL135C RPL34BP40525 121 aaKnown RBP7.29□□□□□ -1.24
VHS2YIL135C MRX10Q05648 414 aa7.29□□□□□ -1.24
VHS2YIL135C LTE1P07866 1435 aa7.29□□□□□ -1.24
VHS2YIL135C TAF2P23255 1407 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms