RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	DCD1	P06773	312 aa		12.22	□□□□□ -0.45
TIR3	YIL011W	HPC2	Q01448	625 aa		12.22	□□□□□ -0.45
TIR3	YIL011W	LPD1	P09624	499 aa	Known RBP	12.21	□□□□□ -0.45
TIR3	YIL011W	CTI6	Q08923	506 aa		12.2	□□□□□ -0.46
TIR3	YIL011W	ILV3	P39522	585 aa	Known RBP	12.19	□□□□□ -0.46
TIR3	YIL011W	UBP12	P39538	1254 aa		12.19	□□□□□ -0.46
TIR3	YIL011W	RAT1	Q02792	1006 aa	Known RBP	12.18	□□□□□ -0.46
TIR3	YIL011W	NMD2	P38798	1089 aa	Known RBP	12.17	□□□□□ -0.46
TIR3	YIL011W	SET1	P38827	1080 aa	Known RBP	12.17	□□□□□ -0.46
TIR3	YIL011W	FCP1	Q03254	732 aa		12.17	□□□□□ -0.46
TIR3	YIL011W	PSH1	Q12161	406 aa		12.17	□□□□□ -0.46
TIR3	YIL011W	SUP35	P05453	685 aa	Known RBP	12.16	□□□□□ -0.46
TIR3	YIL011W	TOS1	P38288	455 aa		12.16	□□□□□ -0.46
TIR3	YIL011W	HGH1	P48362	394 aa	Known RBP	12.16	□□□□□ -0.46
TIR3	YIL011W	ITC1	P53125	1264 aa		12.16	□□□□□ -0.46
TIR3	YIL011W	HAT1	Q12341	374 aa		12.16	□□□□□ -0.46
TIR3	YIL011W	GCD7	P32502	381 aa	Predicted RBP	12.15	□□□□□ -0.46
TIR3	YIL011W	RIX7	Q07844	837 aa	Known RBP	12.15	□□□□□ -0.46
TIR3	YIL011W	SSK22	P25390	1331 aa	Predicted RBP	12.13	□□□□□ -0.47
TIR3	YIL011W	DIB1	Q06819	143 aa	Predicted RBP	12.13	□□□□□ -0.47
TIR3	YIL011W	SSF1	P38789	453 aa	Predicted RBP	12.11	□□□□□ -0.47
TIR3	YIL011W	MTC5	Q03897	1148 aa		12.11	□□□□□ -0.47
TIR3	YIL011W	ECM16	Q04217	1267 aa	Known RBP	12.11	□□□□□ -0.47
TIR3	YIL011W	NCB2	Q92317	146 aa		12.11	□□□□□ -0.47
TIR3	YIL011W	BDP1	P46678	594 aa		12.1	□□□□□ -0.47
TIR3	YIL011W	BDF2	Q07442	638 aa		12.1	□□□□□ -0.47
TIR3	YIL011W	SNU66	Q12420	587 aa	Predicted RBP	12.1	□□□□□ -0.47
TIR3	YIL011W	RFC1	P38630	861 aa	Known RBP	12.09	□□□□□ -0.47
TIR3	YIL011W	RPC31	P17890	251 aa		12.08	□□□□□ -0.48
TIR3	YIL011W	HXT10	P43581	546 aa		12.08	□□□□□ -0.48
TIR3	YIL011W	IRC3	Q06683	689 aa		12.08	□□□□□ -0.48
TIR3	YIL011W	SAC3	P46674	1301 aa		12.08	□□□□□ -0.48
TIR3	YIL011W	NKP2	Q06162	153 aa		12.06	□□□□□ -0.48
TIR3	YIL011W	MSN5	P52918	1224 aa		12.05	□□□□□ -0.48
TIR3	YIL011W	SLA1	P32790	1244 aa		12.04	□□□□□ -0.48
TIR3	YIL011W	SYF1	Q04048	859 aa	Predicted RBP	12.04	□□□□□ -0.48
TIR3	YIL011W	PFF1	P38244	976 aa		12.03	□□□□□ -0.48
TIR3	YIL011W	RPN1	P38764	993 aa	Known RBP	12.02	□□□□□ -0.49
TIR3	YIL011W	PDR18	P53756	1333 aa		12.02	□□□□□ -0.49
TIR3	YIL011W	SAS4	Q04003	481 aa		12.01	□□□□□ -0.49
TIR3	YIL011W	GYP5	Q12344	894 aa		12.01	□□□□□ -0.49
TIR3	YIL011W	DPH6	Q12429	685 aa		12.01	□□□□□ -0.49
TIR3	YIL011W	RAD50	P12753	1312 aa		12.01	□□□□□ -0.49
TIR3	YIL011W	CAF20	P12962	161 aa	Known RBP	12	□□□□□ -0.49
TIR3	YIL011W	FRD1	P32614	470 aa	Known RBP	12	□□□□□ -0.49
TIR3	YIL011W	NGR1	P32831	672 aa	Known RBP	12	□□□□□ -0.49
TIR3	YIL011W	UBP16	Q02863	499 aa		12	□□□□□ -0.49
TIR3	YIL011W	CDC16	P09798	840 aa		11.99	□□□□□ -0.49
TIR3	YIL011W	YKL222C	P35995	705 aa		11.99	□□□□□ -0.49
TIR3	YIL011W	MLC1	P53141	149 aa		11.99	□□□□□ -0.49
TIR3	YIL011W	SRC1	Q03707	834 aa		11.99	□□□□□ -0.49
TIR3	YIL011W	NOT3	P06102	836 aa	Known RBP	11.98	□□□□□ -0.49
TIR3	YIL011W	SEC18	P18759	758 aa	Known RBP	11.98	□□□□□ -0.49
TIR3	YIL011W	SIT4	P20604	311 aa		11.98	□□□□□ -0.49
TIR3	YIL011W	SMY1	P32364	656 aa	Known RBP	11.98	□□□□□ -0.49
TIR3	YIL011W	ECM21	P38167	1117 aa	Known RBP	11.98	□□□□□ -0.49
TIR3	YIL011W	EAF6	P47128	113 aa		11.98	□□□□□ -0.49
TIR3	YIL011W	CWH41	P53008	833 aa		11.98	□□□□□ -0.49
TIR3	YIL011W	YGL242C	P53066	181 aa		11.98	□□□□□ -0.49
TIR3	YIL011W	THI3	Q07471	609 aa		11.98	□□□□□ -0.49
TIR3	YIL011W	PMD1	P32634	1753 aa		11.97	□□□□□ -0.49
TIR3	YIL011W	ERT1	P38140	529 aa		11.97	□□□□□ -0.49
TIR3	YIL011W	ERO1	Q03103	563 aa		11.97	□□□□□ -0.49
TIR3	YIL011W	ADR1	P07248	1323 aa		11.96	□□□□□ -0.49
TIR3	YIL011W	MGM1	P32266	881 aa		11.96	□□□□□ -0.49
TIR3	YIL011W	ICP55	P40051	511 aa		11.96	□□□□□ -0.49
TIR3	YIL011W	RMD1	Q03441	430 aa		11.96	□□□□□ -0.49
TIR3	YIL011W	RRI2	Q12348	645 aa		11.96	□□□□□ -0.49
TIR3	YIL011W	CTT1	P06115	562 aa		11.95	□□□□□ -0.5
TIR3	YIL011W	AI2	P03876	854 aa		11.94	□□□□□ -0.5
TIR3	YIL011W	VAS1	P07806	1104 aa	Known RBP	11.94	□□□□□ -0.5
TIR3	YIL011W	YNL193W	P53870	558 aa		11.94	□□□□□ -0.5
TIR3	YIL011W	ALO1	P54783	526 aa	Known RBP	11.94	□□□□□ -0.5
TIR3	YIL011W	BRE1	Q07457	700 aa	Known RBP	11.94	□□□□□ -0.5
TIR3	YIL011W	POM152	P39685	1337 aa		11.93	□□□□□ -0.5
TIR3	YIL011W	KTR3	P38130	404 aa	Predicted RBP	11.93	□□□□□ -0.5
TIR3	YIL011W	NUG1	P40010	520 aa	Known RBP	11.92	□□□□□ -0.5
TIR3	YIL011W	YER156C	P40093	338 aa	Known RBP	11.92	□□□□□ -0.5
TIR3	YIL011W	RPT4	P53549	437 aa	Known RBP	11.92	□□□□□ -0.5
TIR3	YIL011W	RPN7	Q06103	429 aa	Known RBP	11.92	□□□□□ -0.5
TIR3	YIL011W	GRX6	Q12438	231 aa		11.91	□□□□□ -0.5
TIR3	YIL011W	KRE2	P27809	442 aa		11.9	□□□□□ -0.5
TIR3	YIL011W	UBX2	Q04228	584 aa		11.9	□□□□□ -0.5
TIR3	YIL011W	PIF1	P07271	859 aa		11.89	□□□□□ -0.51
TIR3	YIL011W	BRN1	P38170	754 aa		11.89	□□□□□ -0.51
TIR3	YIL011W	SPL2	P38839	148 aa		11.89	□□□□□ -0.51
TIR3	YIL011W	MRPS35	P53292	345 aa		11.89	□□□□□ -0.51
TIR3	YIL011W	GCR2	Q01722	534 aa		11.89	□□□□□ -0.51
TIR3	YIL011W	PBY1	P38254	753 aa		11.88	□□□□□ -0.51
TIR3	YIL011W	KIN4	Q01919	800 aa		11.88	□□□□□ -0.51
TIR3	YIL011W	FPR4	Q06205	392 aa	Predicted RBP	11.88	□□□□□ -0.51
TIR3	YIL011W	KTR1	P27810	393 aa	Known RBP	11.87	□□□□□ -0.51
TIR3	YIL011W	DLD1	P32891	587 aa		11.87	□□□□□ -0.51
TIR3	YIL011W	RET1	P22276	1149 aa	Known RBP	11.86	□□□□□ -0.51
TIR3	YIL011W	ICL1	P28240	557 aa	Predicted RBP	11.86	□□□□□ -0.51
TIR3	YIL011W	YKU70	P32807	602 aa		11.86	□□□□□ -0.51
TIR3	YIL011W	STM1	P39015	273 aa	Known RBP	11.86	□□□□□ -0.51
TIR3	YIL011W	IRC4	Q03036	179 aa		11.86	□□□□□ -0.51
TIR3	YIL011W	RIM20	Q12033	661 aa		11.86	□□□□□ -0.51
TIR3	YIL011W	OSH3	P38713	996 aa	Known RBP	11.85	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms