RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W FPK1P53739 893 aa6.39□□□□□ -1.39
SPC97YHR172W SYH1Q02875 849 aaKnown RBP6.39□□□□□ -1.39
SPC97YHR172W SPR28Q04921 423 aa6.39□□□□□ -1.39
SPC97YHR172W SPT2P06843 333 aaPredicted RBP6.38□□□□□ -1.39
SPC97YHR172W NIS1P53939 407 aa6.38□□□□□ -1.39
SPC97YHR172W GDE1Q02979 1223 aa6.38□□□□□ -1.39
SPC97YHR172W PNP1Q05788 311 aa6.38□□□□□ -1.39
SPC97YHR172W CDC11P32458 415 aa6.38□□□□□ -1.39
SPC97YHR172W MTC2P34246 357 aa6.38□□□□□ -1.39
SPC97YHR172W YLR125WQ12138 136 aa6.38□□□□□ -1.39
SPC97YHR172W MCM2P29469 868 aa6.37□□□□□ -1.39
SPC97YHR172W QDR1P40475 563 aa6.37□□□□□ -1.39
SPC97YHR172W VMA1P17255 1071 aaKnown RBP6.37□□□□□ -1.39
SPC97YHR172W TIM23P32897 222 aa6.37□□□□□ -1.39
SPC97YHR172W ORC6P38826 435 aa6.37□□□□□ -1.39
SPC97YHR172W TAT2P38967 592 aa6.37□□□□□ -1.39
SPC97YHR172W VID27P40157 782 aa6.37□□□□□ -1.39
SPC97YHR172W MTO1P53070 669 aa6.37□□□□□ -1.39
SPC97YHR172W FUR4P05316 633 aaKnown RBP6.36□□□□□ -1.39
SPC97YHR172W HAP4P14064 554 aa6.36□□□□□ -1.39
SPC97YHR172W YJU3P28321 313 aa6.36□□□□□ -1.39
SPC97YHR172W DEF1P35732 738 aaKnown RBP6.36□□□□□ -1.39
SPC97YHR172W IES5P40060 125 aa6.36□□□□□ -1.39
SPC97YHR172W ATP4P05626 244 aa6.36□□□□□ -1.39
SPC97YHR172W SRS2P12954 1174 aa6.36□□□□□ -1.39
SPC97YHR172W DAS1P47005 663 aa6.36□□□□□ -1.39
SPC97YHR172W RRI2Q12348 645 aa6.36□□□□□ -1.39
SPC97YHR172W TMA7Q3E764 64 aaKnown RBP6.36□□□□□ -1.39
SPC97YHR172W NOP14Q99207 810 aaKnown RBP6.36□□□□□ -1.39
SPC97YHR172W BUD31P25337 157 aaPredicted RBP6.35□□□□□ -1.39
SPC97YHR172W BDF1P35817 686 aa6.35□□□□□ -1.39
SPC97YHR172W TIF4632P39936 914 aaKnown RBP6.35□□□□□ -1.39
SPC97YHR172W SCJ1P25303 377 aa6.35□□□□□ -1.39
SPC97YHR172W GRX1P25373 110 aaKnown RBP6.35□□□□□ -1.39
SPC97YHR172W RAD54P32863 898 aa6.35□□□□□ -1.39
SPC97YHR172W STS1P38637 319 aa6.35□□□□□ -1.39
SPC97YHR172W YMR1P47147 688 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
SPC97YHR172W YNR029CP53729 429 aaKnown RBP6.35□□□□□ -1.39
SPC97YHR172W IMH1Q06704 911 aaKnown RBP6.35□□□□□ -1.39
SPC97YHR172W PUS1Q12211 544 aaKnown RBP6.35□□□□□ -1.39
SPC97YHR172W NYV1Q12255 253 aa6.35□□□□□ -1.39
SPC97YHR172W VPS5Q92331 675 aa6.35□□□□□ -1.39
SPC97YHR172W FOB1O13329 566 aa6.34□□□□□ -1.39
SPC97YHR172W RPT1P33299 467 aaKnown RBP6.34□□□□□ -1.39
SPC97YHR172W MNR2P35724 969 aa6.34□□□□□ -1.39
SPC97YHR172W JNM1P36224 373 aa6.34□□□□□ -1.39
SPC97YHR172W CHZ1P40019 153 aaPredicted RBP6.34□□□□□ -1.39
SPC97YHR172W CWC24P53769 259 aa6.34□□□□□ -1.39
SPC97YHR172W HSC82P15108 705 aaKnown RBP6.34□□□□□ -1.4
SPC97YHR172W HSE1P38753 452 aa6.34□□□□□ -1.4
SPC97YHR172W YAP1801P38856 637 aa6.34□□□□□ -1.4
SPC97YHR172W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.34□□□□□ -1.4not detected
SPC97YHR172W MPH2P0CD99 609 aa6.33□□□□□ -1.4
SPC97YHR172W MPH3P0CE00 602 aa6.33□□□□□ -1.4
SPC97YHR172W RGR1P19263 1082 aa6.33□□□□□ -1.4
SPC97YHR172W THI4P32318 326 aa6.33□□□□□ -1.4
SPC97YHR172W PEP7P32609 515 aa6.33□□□□□ -1.4
SPC97YHR172W RTP1Q12751 981 aa6.33□□□□□ -1.4
SPC97YHR172W PCS60P38137 543 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SPC97YHR172W SXM1Q04175 944 aaKnown RBP6.33□□□□□ -1.4
SPC97YHR172W INH1P01097 85 aa6.32□□□□□ -1.4
SPC97YHR172W FOX2Q02207 900 aaKnown RBP6.32□□□□□ -1.4
SPC97YHR172W PKH1Q03407 766 aa6.32□□□□□ -1.4
SPC97YHR172W PET112P33893 541 aa6.32□□□□□ -1.4
SPC97YHR172W NAF1P53919 492 aaKnown RBP6.32□□□□□ -1.4
SPC97YHR172W MCM16Q12262 181 aa6.31□□□□□ -1.4
SPC97YHR172W ADR1P07248 1323 aa6.31□□□□□ -1.4
SPC97YHR172W TY1B-AO13527 1196 aaKnown RBP6.31□□□□□ -1.4
SPC97YHR172W PHO4P07270 312 aaKnown RBP6.31□□□□□ -1.4
SPC97YHR172W PIF1P07271 859 aa6.31□□□□□ -1.4
SPC97YHR172W HIR1P32479 840 aa6.31□□□□□ -1.4
SPC97YHR172W TIM54P47045 478 aa6.31□□□□□ -1.4
SPC97YHR172W HOS2P53096 452 aaPredicted RBP6.31□□□□□ -1.4
SPC97YHR172W YOL036WQ08206 761 aa6.31□□□□□ -1.4
SPC97YHR172W TMA17Q12513 150 aa6.31□□□□□ -1.4
SPC97YHR172W RSC30P38781 883 aa6.3□□□□□ -1.4
SPC97YHR172W YEF3P16521 1044 aaKnown RBP6.3□□□□□ -1.4
SPC97YHR172W PHO87P25360 923 aa6.3□□□□□ -1.4
SPC97YHR172W YKL222CP35995 705 aa6.3□□□□□ -1.4
SPC97YHR172W CAB3P36076 571 aa6.3□□□□□ -1.4
SPC97YHR172W NAN1Q02931 896 aaKnown RBP6.3□□□□□ -1.4
SPC97YHR172W SND1Q04007 877 aa6.3□□□□□ -1.4
SPC97YHR172W PUN1Q06991 263 aa6.3□□□□□ -1.4
SPC97YHR172W GRC3Q07845 632 aa6.3□□□□□ -1.4
SPC97YHR172W ENV9Q08651 330 aa6.29□□□□□ -1.4
SPC97YHR172W RPS26AP39938 119 aaKnown RBP6.28□□□□□ -1.4
SPC97YHR172W RPS26BP39939 119 aaKnown RBP6.28□□□□□ -1.4
SPC97YHR172W NIT1P40447 199 aa6.28□□□□□ -1.4
SPC97YHR172W MTR4P47047 1073 aaKnown RBP6.28□□□□□ -1.4
SPC97YHR172W SRB7P47822 140 aa6.28□□□□□ -1.4
SPC97YHR172W NSR1P27476 414 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SPC97YHR172W UBX4P54730 416 aa6.28□□□□□ -1.4
SPC97YHR172W SSH4P32343 579 aa6.27□□□□□ -1.4
SPC97YHR172W YHR020WP38708 688 aaKnown RBP6.27□□□□□ -1.4
SPC97YHR172W CIT1P00890 479 aa6.27□□□□□ -1.41
SPC97YHR172W PGI1P12709 554 aaKnown RBP6.27□□□□□ -1.41
SPC97YHR172W DBP1P24784 617 aaKnown RBP6.27□□□□□ -1.41
SPC97YHR172W PES4P39684 611 aa6.27□□□□□ -1.41
SPC97YHR172W MVP1P40959 511 aaKnown RBP6.27□□□□□ -1.41
SPC97YHR172W ROM1P53046 1155 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms