RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C LCB5Q06147 687 aaKnown RBP7.19□□□□□ -1.26
CUP1-2YHR055C SUB2Q07478 446 aaKnown RBP7.19□□□□□ -1.26
CUP1-2YHR055C GAR1P28007 205 aaKnown RBP7.17□□□□□ -1.26
CUP1-2YHR055C UBX7P38349 436 aa7.17□□□□□ -1.26
CUP1-2YHR055C ALA1P40825 983 aaKnown RBP7.17□□□□□ -1.26
CUP1-2YHR055C SUM1P46676 1062 aa7.17□□□□□ -1.26
CUP1-2YHR055C TCB1Q12466 1186 aa7.17□□□□□ -1.26
CUP1-2YHR055C CYT1P07143 309 aa7.16□□□□□ -1.26
CUP1-2YHR055C GBP2P25555 427 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
CUP1-2YHR055C GLY1P37303 387 aaKnown RBP7.16□□□□□ -1.26
CUP1-2YHR055C SCW11P53189 542 aa7.16□□□□□ -1.26
CUP1-2YHR055C NOB1Q08444 459 aaKnown RBP7.15□□□□□ -1.26
CUP1-2YHR055C VAN1P23642 535 aa7.14□□□□□ -1.27
CUP1-2YHR055C VTC4P47075 721 aa7.14□□□□□ -1.27
CUP1-2YHR055C MSN5P52918 1224 aa7.14□□□□□ -1.27
CUP1-2YHR055C ROM1P53046 1155 aa7.14□□□□□ -1.27
CUP1-2YHR055C DAL1P32375 460 aa7.13□□□□□ -1.27
CUP1-2YHR055C AHP1P38013 176 aaKnown RBP7.13□□□□□ -1.27
CUP1-2YHR055C SSN3P39073 555 aa7.12□□□□□ -1.27
CUP1-2YHR055C YML083CQ04526 418 aa7.12□□□□□ -1.27
CUP1-2YHR055C TRS33Q99394 268 aa7.12□□□□□ -1.27
CUP1-2YHR055C UBP1P25037 809 aa7.11□□□□□ -1.27
CUP1-2YHR055C CWH41P53008 833 aa7.11□□□□□ -1.27
CUP1-2YHR055C RPL34AP87262 121 aaPredicted RBP7.11□□□□□ -1.27
CUP1-2YHR055C TY1A-BLQ12266 440 aa7.11□□□□□ -1.27
CUP1-2YHR055C SSA1P10591 642 aaKnown RBP7.1□□□□□ -1.27
CUP1-2YHR055C MCM1P11746 286 aa7.09□□□□□ -1.27
CUP1-2YHR055C OSH7P38755 437 aa7.09□□□□□ -1.27
CUP1-2YHR055C PUF6Q04373 656 aaKnown RBP7.09□□□□□ -1.27
CUP1-2YHR055C YPQ2Q06328 317 aa7.09□□□□□ -1.27
CUP1-2YHR055C JJJ2P46997 583 aa7.08□□□□□ -1.28
CUP1-2YHR055C NGR1P32831 672 aaKnown RBP7.06□□□□□ -1.28
CUP1-2YHR055C CAF120P53836 1060 aa7.06□□□□□ -1.28
CUP1-2YHR055C CDC19P00549 500 aaKnown RBP7.05□□□□□ -1.28
CUP1-2YHR055C IRE1P32361 1115 aa7.05□□□□□ -1.28
CUP1-2YHR055C YTA6P40328 754 aa7.05□□□□□ -1.28
CUP1-2YHR055C UBP15P50101 1230 aa7.05□□□□□ -1.28
CUP1-2YHR055C PUN1Q06991 263 aa7.05□□□□□ -1.28
CUP1-2YHR055C SLA1P32790 1244 aa7.04□□□□□ -1.28
CUP1-2YHR055C ACO2P39533 789 aa7.04□□□□□ -1.28
CUP1-2YHR055C RGA1P39083 1007 aa7.03□□□□□ -1.28
CUP1-2YHR055C SCD5P34758 872 aa7.02□□□□□ -1.29
CUP1-2YHR055C GEF1P37020 779 aa7.02□□□□□ -1.29
CUP1-2YHR055C ROG3P43602 733 aa7.02□□□□□ -1.29
CUP1-2YHR055C TY1A-DR3Q12441 440 aa7.02□□□□□ -1.29
CUP1-2YHR055C SRS2P12954 1174 aa7.01□□□□□ -1.29
CUP1-2YHR055C SHM1P37292 490 aaPredicted RBP7.01□□□□□ -1.29
CUP1-2YHR055C YIR007WP40566 764 aa7.01□□□□□ -1.29
CUP1-2YHR055C CWC15Q03772 175 aaKnown RBP7.01□□□□□ -1.29
CUP1-2YHR055C TY1A-MR1Q04215 440 aa7.01□□□□□ -1.29
CUP1-2YHR055C Q0182Q9ZZW1 134 aa7.01□□□□□ -1.29
CUP1-2YHR055C ALD4P46367 519 aaKnown RBP7□□□□□ -1.29
CUP1-2YHR055C PDC6P26263 563 aaKnown RBP6.99□□□□□ -1.29
CUP1-2YHR055C MLF3P32047 452 aa6.99□□□□□ -1.29
CUP1-2YHR055C SUV3P32580 737 aa6.98□□□□□ -1.29
CUP1-2YHR055C YNL165WP53891 406 aa6.98□□□□□ -1.29
CUP1-2YHR055C NAM8Q00539 523 aaKnown RBP6.98□□□□□ -1.29
CUP1-2YHR055C FOX2Q02207 900 aaKnown RBP6.98□□□□□ -1.29
CUP1-2YHR055C PNP1Q05788 311 aa6.98□□□□□ -1.29
CUP1-2YHR055C UTP4Q06679 776 aaKnown RBP6.98□□□□□ -1.29
CUP1-2YHR055C YDL176WQ12027 708 aa6.98□□□□□ -1.29
CUP1-2YHR055C PSH1Q12161 406 aa6.98□□□□□ -1.29
CUP1-2YHR055C RPS31P05759 152 aaKnown RBP6.97□□□□□ -1.29
CUP1-2YHR055C HXT5P38695 592 aa6.97□□□□□ -1.29
CUP1-2YHR055C RRN6P32786 894 aa6.96□□□□□ -1.3
CUP1-2YHR055C CAB1Q04430 367 aa6.96□□□□□ -1.3
CUP1-2YHR055C YMR265CQ03508 461 aaKnown RBP6.95□□□□□ -1.3
CUP1-2YHR055C FUR4P05316 633 aaKnown RBP6.94□□□□□ -1.3
CUP1-2YHR055C CDC3P32457 520 aaKnown RBP6.94□□□□□ -1.3
CUP1-2YHR055C YBR197CP38306 217 aa6.94□□□□□ -1.3
CUP1-2YHR055C CUZ1P53899 274 aa6.94□□□□□ -1.3
CUP1-2YHR055C RPP1AP05318 106 aaPredicted RBP6.93□□□□□ -1.3
CUP1-2YHR055C LEU1P07264 779 aaKnown RBP6.93□□□□□ -1.3
CUP1-2YHR055C DIT1P21623 536 aa6.93□□□□□ -1.3
CUP1-2YHR055C ISC10P32645 267 aa6.93□□□□□ -1.3
CUP1-2YHR055C TPS3P38426 1054 aaKnown RBP6.93□□□□□ -1.3
CUP1-2YHR055C MTO1P53070 669 aa6.93□□□□□ -1.3
CUP1-2YHR055C YPL062WQ02781 134 aa6.93□□□□□ -1.3
CUP1-2YHR055C CCP1P00431 361 aa6.92□□□□□ -1.3
CUP1-2YHR055C MRPL33P20084 86 aa6.92□□□□□ -1.3
CUP1-2YHR055C MRPL16P38064 232 aa6.92□□□□□ -1.3
CUP1-2YHR055C CEM1P39525 442 aa6.92□□□□□ -1.3
CUP1-2YHR055C KAR5Q04746 504 aa6.92□□□□□ -1.3
CUP1-2YHR055C STB3Q12427 513 aa6.92□□□□□ -1.3
CUP1-2YHR055C KAP122P32767 1081 aa6.91□□□□□ -1.3
CUP1-2YHR055C KRE33P53914 1056 aaKnown RBP6.91□□□□□ -1.3
CUP1-2YHR055C ALD2P47771 506 aa6.9□□□□□ -1.3
CUP1-2YHR055C LYS5P50113 272 aa6.9□□□□□ -1.3
CUP1-2YHR055C YGR035CP53222 116 aa6.9□□□□□ -1.3
CUP1-2YHR055C RGP1P16664 663 aa6.89□□□□□ -1.31
CUP1-2YHR055C VMA3P25515 160 aa6.89□□□□□ -1.31
CUP1-2YHR055C DYS1P38791 387 aa6.89□□□□□ -1.31
CUP1-2YHR055C QDR2P40474 542 aa6.89□□□□□ -1.31
CUP1-2YHR055C FPS1P23900 669 aa6.88□□□□□ -1.31
CUP1-2YHR055C LDH1P38139 375 aa6.88□□□□□ -1.31
CUP1-2YHR055C ADE12P80210 433 aaKnown RBP6.88□□□□□ -1.31
CUP1-2YHR055C HPF1Q05164 967 aa6.87□□□□□ -1.31
CUP1-2YHR055C YDR461C-AQ2V2P7 80 aa6.87□□□□□ -1.31
CUP1-2YHR055C BOL3P39724 118 aa6.86□□□□□ -1.31
CUP1-2YHR055C SPR3P41901 512 aa6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms