RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	EMP47	P43555	445 aa		4.65	□□□□□ -1.67
RAD4	YER162C	UBP16	Q02863	499 aa		4.65	□□□□□ -1.67
RAD4	YER162C	HIM1	Q06674	414 aa		4.65	□□□□□ -1.67
RAD4	YER162C	SSK22	P25390	1331 aa	Predicted RBP	4.64	□□□□□ -1.67
RAD4	YER162C	CST9	Q06032	482 aa		4.64	□□□□□ -1.67
RAD4	YER162C	NUG1	P40010	520 aa	Known RBP	4.63	□□□□□ -1.67
RAD4	YER162C	YGR117C	P53270	476 aa		4.63	□□□□□ -1.67
RAD4	YER162C	NOP8	Q08287	484 aa	Predicted RBP	4.63	□□□□□ -1.67
RAD4	YER162C	HSP104	P31539	908 aa	Known RBP	4.63	□□□□□ -1.67
RAD4	YER162C	SER1	P33330	395 aa	Known RBP	4.63	□□□□□ -1.67
RAD4	YER162C	MOT2	P34909	587 aa	Known RBP	4.63	□□□□□ -1.67
RAD4	YER162C	SSP2	Q08646	371 aa		4.63	□□□□□ -1.67
RAD4	YER162C	SLX8	P40072	274 aa		4.62	□□□□□ -1.67
RAD4	YER162C	SYF1	Q04048	859 aa	Predicted RBP	4.62	□□□□□ -1.67
RAD4	YER162C	LYS2	P07702	1392 aa		4.62	□□□□□ -1.67
RAD4	YER162C	GAP1	P19145	602 aa	Predicted RBP	4.62	□□□□□ -1.67
RAD4	YER162C	RTG3	P38165	486 aa		4.62	□□□□□ -1.67
RAD4	YER162C	SSP1	P38871	571 aa		4.62	□□□□□ -1.67
RAD4	YER162C	SUB1	P54000	292 aa	Known RBP	4.62	□□□□□ -1.67
RAD4	YER162C	AOS1	Q06624	347 aa		4.62	□□□□□ -1.67
RAD4	YER162C	RRT6	P53117	311 aa	Predicted RBP	4.61	□□□□□ -1.67
RAD4	YER162C	AIM7	Q12156	149 aa		4.61	□□□□□ -1.67
RAD4	YER162C	KCC4	P25389	1037 aa		4.61	□□□□□ -1.67
RAD4	YER162C	RSC30	P38781	883 aa		4.61	□□□□□ -1.67
RAD4	YER162C	VPS72	Q03388	795 aa		4.61	□□□□□ -1.67
RAD4	YER162C	MAL31	P38156	614 aa		4.6	□□□□□ -1.67
RAD4	YER162C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RAD4	YER162C	CSR2	Q12734	1121 aa		4.6	□□□□□ -1.67
RAD4	YER162C	GSC2	P40989	1895 aa		4.6	□□□□□ -1.67
RAD4	YER162C	CAF20	P12962	161 aa	Known RBP	4.6	□□□□□ -1.67
RAD4	YER162C	SWE1	P32944	819 aa		4.6	□□□□□ -1.67
RAD4	YER162C	ARG8	P18544	423 aa		4.59	□□□□□ -1.67
RAD4	YER162C	APE3	P37302	537 aa	Known RBP	4.59	□□□□□ -1.67
RAD4	YER162C	AKL1	P38080	1108 aa	Known RBP	4.59	□□□□□ -1.67
RAD4	YER162C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RAD4	YER162C	CRF1	Q04930	467 aa		4.59	□□□□□ -1.67
RAD4	YER162C	HAT1	Q12341	374 aa		4.59	□□□□□ -1.67
RAD4	YER162C	TOM1	Q03280	3268 aa		4.59	□□□□□ -1.67
RAD4	YER162C	FRD1	P32614	470 aa	Known RBP	4.58	□□□□□ -1.68
RAD4	YER162C	YGL082W	P53155	381 aa		4.58	□□□□□ -1.68
RAD4	YER162C	DCD1	P06773	312 aa		4.58	□□□□□ -1.68
RAD4	YER162C	KAR2	P16474	682 aa	Known RBP	4.58	□□□□□ -1.68
RAD4	YER162C	SPB4	P25808	606 aa	Predicted RBP	4.58	□□□□□ -1.68
RAD4	YER162C	ASF1	P32447	279 aa		4.58	□□□□□ -1.68
RAD4	YER162C	RTS3	P53289	263 aa		4.58	□□□□□ -1.68
RAD4	YER162C	TRM44	Q02648	567 aa	Known RBP	4.58	□□□□□ -1.68
RAD4	YER162C	SAS4	Q04003	481 aa		4.58	□□□□□ -1.68
RAD4	YER162C	ALE1	Q08548	619 aa		4.58	□□□□□ -1.68
RAD4	YER162C	GIN4	Q12263	1142 aa		4.58	□□□□□ -1.68
RAD4	YER162C	NTH2	P35172	780 aa		4.57	□□□□□ -1.68
RAD4	YER162C	BRN1	P38170	754 aa		4.57	□□□□□ -1.68
RAD4	YER162C	TIF4632	P39936	914 aa	Known RBP	4.57	□□□□□ -1.68
RAD4	YER162C	UGA3	P26370	528 aa		4.57	□□□□□ -1.68
RAD4	YER162C	RPS0B	P46654	252 aa	Known RBP	4.57	□□□□□ -1.68
RAD4	YER162C	PAM1	P37304	830 aa	Known RBP	4.56	□□□□□ -1.68
RAD4	YER162C	HGH1	P48362	394 aa	Known RBP	4.56	□□□□□ -1.68
RAD4	YER162C	UBX2	Q04228	584 aa		4.56	□□□□□ -1.68
RAD4	YER162C	RRG1	Q12167	365 aa	Predicted RBP	4.56	□□□□□ -1.68
RAD4	YER162C	HPR1	P17629	752 aa	Known RBP	4.56	□□□□□ -1.68
RAD4	YER162C	ATG36	P46983	293 aa		4.56	□□□□□ -1.68
RAD4	YER162C	YVH1	Q02256	364 aa	Known RBP	4.56	□□□□□ -1.68
RAD4	YER162C	RBA50	Q04418	439 aa		4.56	□□□□□ -1.68
RAD4	YER162C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RAD4	YER162C	PRY3	P47033	881 aa		4.55	□□□□□ -1.68
RAD4	YER162C	VPS4	P52917	437 aa		4.55	□□□□□ -1.68
RAD4	YER162C	YPR204W	Q08995	1032 aa		4.55	□□□□□ -1.68
RAD4	YER162C	SET4	P42948	560 aa		4.55	□□□□□ -1.68
RAD4	YER162C	AFG2	P32794	780 aa		4.54	□□□□□ -1.68
RAD4	YER162C	STV1	P37296	890 aa		4.54	□□□□□ -1.68
RAD4	YER162C	PSD2	P53037	1138 aa	Known RBP	4.54	□□□□□ -1.68
RAD4	YER162C	RPL17A	P05740	184 aa	Known RBP	4.53	□□□□□ -1.68
RAD4	YER162C	KRE2	P27809	442 aa		4.53	□□□□□ -1.68
RAD4	YER162C	GEF1	P37020	779 aa		4.53	□□□□□ -1.68
RAD4	YER162C	PNT1	P38969	423 aa		4.53	□□□□□ -1.68
RAD4	YER162C	RPL17B	P46990	184 aa	Known RBP	4.53	□□□□□ -1.68
RAD4	YER162C	YJR008W	P47085	338 aa		4.53	□□□□□ -1.68
RAD4	YER162C	CLA4	P48562	842 aa		4.53	□□□□□ -1.68
RAD4	YER162C	NSE3	Q05541	303 aa		4.53	□□□□□ -1.68
RAD4	YER162C	GAS5	Q08193	484 aa		4.53	□□□□□ -1.68
RAD4	YER162C	EAR1	Q03212	550 aa		4.52	□□□□□ -1.69
RAD4	YER162C	TRP5	P00931	707 aa	Known RBP	4.52	□□□□□ -1.69
RAD4	YER162C	CBP1	P07252	654 aa		4.52	□□□□□ -1.69
RAD4	YER162C	FAR11	P53917	953 aa		4.52	□□□□□ -1.69
RAD4	YER162C	YLR225C	Q05948	407 aa	Known RBP	4.52	□□□□□ -1.69
RAD4	YER162C	YLR271W	Q06152	274 aa		4.52	□□□□□ -1.69
RAD4	YER162C	APL2	P36000	726 aa	Predicted RBP	4.51	□□□□□ -1.69
RAD4	YER162C	UTP7	P40055	554 aa	Known RBP	4.51	□□□□□ -1.69
RAD4	YER162C	FBP1	P09201	348 aa		4.51	□□□□□ -1.69
RAD4	YER162C	EBP2	P36049	427 aa	Known RBP	4.51	□□□□□ -1.69
RAD4	YER162C	SPC42	P36094	363 aa		4.51	□□□□□ -1.69
RAD4	YER162C	DPH6	Q12429	685 aa		4.51	□□□□□ -1.69
RAD4	YER162C	GAL2	P13181	574 aa		4.5	□□□□□ -1.69
RAD4	YER162C	DLD1	P32891	587 aa		4.5	□□□□□ -1.69
RAD4	YER162C	ASH1	P34233	588 aa		4.5	□□□□□ -1.69
RAD4	YER162C	ICP55	P40051	511 aa		4.5	□□□□□ -1.69
RAD4	YER162C	OSW7	P43611	510 aa		4.5	□□□□□ -1.69
RAD4	YER162C	PAP2	P53632	584 aa	Known RBP	4.5	□□□□□ -1.69
RAD4	YER162C	YNL050C	P53952	270 aa		4.5	□□□□□ -1.69
RAD4	YER162C	FLO11	P08640	1367 aa		4.5	□□□□□ -1.69
RAD4	YER162C	KIN1	P13185	1064 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms