RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C LPD1P09624 499 aaKnown RBP13.28□□□□□ -0.28
SPC25YER018C BOI2P39969 1040 aa13.28□□□□□ -0.28
SPC25YER018C SPO1P53541 631 aa13.27□□□□□ -0.29
SPC25YER018C TOS1P38288 455 aa13.26□□□□□ -0.29
SPC25YER018C FCP1Q03254 732 aa13.26□□□□□ -0.29
SPC25YER018C RIX7Q07844 837 aaKnown RBP13.25□□□□□ -0.29
SPC25YER018C ILV3P39522 585 aaKnown RBP13.24□□□□□ -0.29
SPC25YER018C UBP12P39538 1254 aa13.24□□□□□ -0.29
SPC25YER018C RAT1Q02792 1006 aaKnown RBP13.24□□□□□ -0.29
SPC25YER018C ITC1P53125 1264 aa13.23□□□□□ -0.29
SPC25YER018C PSH1Q12161 406 aa13.23□□□□□ -0.29
SPC25YER018C HAT1Q12341 374 aa13.22□□□□□ -0.29
SPC25YER018C SET1P38827 1080 aaKnown RBP13.21□□□□□ -0.29
SPC25YER018C NOP2P40991 618 aaKnown RBP13.21□□□□□ -0.29
SPC25YER018C NMD2P38798 1089 aaKnown RBP13.18□□□□□ -0.3
SPC25YER018C SSK22P25390 1331 aaPredicted RBP13.17□□□□□ -0.3
SPC25YER018C SUP35P05453 685 aaKnown RBP13.17□□□□□ -0.3
SPC25YER018C GCD7P32502 381 aaPredicted RBP13.17□□□□□ -0.3
SPC25YER018C DIB1Q06819 143 aaPredicted RBP13.17□□□□□ -0.3
SPC25YER018C HXT10P43581 546 aa13.16□□□□□ -0.3
SPC25YER018C HGH1P48362 394 aaKnown RBP13.16□□□□□ -0.3
SPC25YER018C BDF2Q07442 638 aa13.16□□□□□ -0.3
SPC25YER018C MTC5Q03897 1148 aa13.14□□□□□ -0.31
SPC25YER018C IRC3Q06683 689 aa13.14□□□□□ -0.31
SPC25YER018C SNU66Q12420 587 aaPredicted RBP13.14□□□□□ -0.31
SPC25YER018C MSN5P52918 1224 aa13.13□□□□□ -0.31
SPC25YER018C BDP1P46678 594 aa13.12□□□□□ -0.31
SPC25YER018C NCB2Q92317 146 aa13.12□□□□□ -0.31
SPC25YER018C CAF20P12962 161 aaKnown RBP13.11□□□□□ -0.31
SPC25YER018C SSF1P38789 453 aaPredicted RBP13.11□□□□□ -0.31
SPC25YER018C RFC1P38630 861 aaKnown RBP13.1□□□□□ -0.31
SPC25YER018C SYF1Q04048 859 aaPredicted RBP13.1□□□□□ -0.31
SPC25YER018C SLA1P32790 1244 aa13.09□□□□□ -0.31
SPC25YER018C PFF1P38244 976 aa13.09□□□□□ -0.31
SPC25YER018C EAF6P47128 113 aa13.09□□□□□ -0.31
SPC25YER018C PMD1P32634 1753 aa13.09□□□□□ -0.31
SPC25YER018C SAC3P46674 1301 aa13.09□□□□□ -0.31
SPC25YER018C FRD1P32614 470 aaKnown RBP13.08□□□□□ -0.32
SPC25YER018C RPN1P38764 993 aaKnown RBP13.08□□□□□ -0.32
SPC25YER018C ECM16Q04217 1267 aaKnown RBP13.08□□□□□ -0.32
SPC25YER018C CWH41P53008 833 aa13.07□□□□□ -0.32
SPC25YER018C NKP2Q06162 153 aa13.07□□□□□ -0.32
SPC25YER018C SMY1P32364 656 aaKnown RBP13.06□□□□□ -0.32
SPC25YER018C NGR1P32831 672 aaKnown RBP13.06□□□□□ -0.32
SPC25YER018C YKL222CP35995 705 aa13.06□□□□□ -0.32
SPC25YER018C SAS4Q04003 481 aa13.06□□□□□ -0.32
SPC25YER018C RPC31P17890 251 aa13.05□□□□□ -0.32
SPC25YER018C SIT4P20604 311 aa13.05□□□□□ -0.32
SPC25YER018C UBP16Q02863 499 aa13.05□□□□□ -0.32
SPC25YER018C GYP5Q12344 894 aa13.05□□□□□ -0.32
SPC25YER018C ERT1P38140 529 aa13.04□□□□□ -0.32
SPC25YER018C DPH6Q12429 685 aa13.04□□□□□ -0.32
SPC25YER018C CTT1P06115 562 aa13.03□□□□□ -0.32
SPC25YER018C ERO1Q03103 563 aa13.03□□□□□ -0.32
SPC25YER018C THI3Q07471 609 aa13.03□□□□□ -0.32
SPC25YER018C PDR18P53756 1333 aa13.03□□□□□ -0.32
SPC25YER018C SEC18P18759 758 aaKnown RBP13.02□□□□□ -0.33
SPC25YER018C MGM1P32266 881 aa13.02□□□□□ -0.33
SPC25YER018C SRC1Q03707 834 aa13.02□□□□□ -0.33
SPC25YER018C ICP55P40051 511 aa13.01□□□□□ -0.33
SPC25YER018C YGL242CP53066 181 aa13.01□□□□□ -0.33
SPC25YER018C NOT3P06102 836 aaKnown RBP13□□□□□ -0.33
SPC25YER018C MLC1P53141 149 aa13□□□□□ -0.33
SPC25YER018C RMD1Q03441 430 aa13□□□□□ -0.33
SPC25YER018C AI2P03876 854 aa12.99□□□□□ -0.33
SPC25YER018C CDC16P09798 840 aa12.99□□□□□ -0.33
SPC25YER018C ECM21P38167 1117 aaKnown RBP12.99□□□□□ -0.33
SPC25YER018C YER156CP40093 338 aaKnown RBP12.99□□□□□ -0.33
SPC25YER018C RRI2Q12348 645 aa12.99□□□□□ -0.33
SPC25YER018C ADR1P07248 1323 aa12.98□□□□□ -0.33
SPC25YER018C RAD50P12753 1312 aa12.98□□□□□ -0.33
SPC25YER018C KIN4Q01919 800 aa12.98□□□□□ -0.33
SPC25YER018C KTR3P38130 404 aaPredicted RBP12.97□□□□□ -0.33
SPC25YER018C RPT4P53549 437 aaKnown RBP12.97□□□□□ -0.33
SPC25YER018C YNL193WP53870 558 aa12.97□□□□□ -0.33
SPC25YER018C RPN7Q06103 429 aaKnown RBP12.97□□□□□ -0.33
SPC25YER018C ALO1P54783 526 aaKnown RBP12.96□□□□□ -0.33
SPC25YER018C POM152P39685 1337 aa12.95□□□□□ -0.34
SPC25YER018C KRE2P27809 442 aa12.95□□□□□ -0.34
SPC25YER018C SPL2P38839 148 aa12.95□□□□□ -0.34
SPC25YER018C GRX6Q12438 231 aa12.95□□□□□ -0.34
SPC25YER018C ICL1P28240 557 aaPredicted RBP12.94□□□□□ -0.34
SPC25YER018C NUG1P40010 520 aaKnown RBP12.94□□□□□ -0.34
SPC25YER018C DUR1,2P32528 1835 aaKnown RBP12.93□□□□□ -0.34
SPC25YER018C VAS1P07806 1104 aaKnown RBP12.93□□□□□ -0.34
SPC25YER018C RET1P22276 1149 aaKnown RBP12.93□□□□□ -0.34
SPC25YER018C YKU70P32807 602 aa12.93□□□□□ -0.34
SPC25YER018C BRE1Q07457 700 aaKnown RBP12.93□□□□□ -0.34
SPC25YER018C TOP1P04786 769 aa12.91□□□□□ -0.34
SPC25YER018C MRPS35P53292 345 aa12.91□□□□□ -0.34
SPC25YER018C UBX2Q04228 584 aa12.91□□□□□ -0.34
SPC25YER018C PIF1P07271 859 aa12.9□□□□□ -0.34
SPC25YER018C PBY1P38254 753 aa12.9□□□□□ -0.34
SPC25YER018C IRC4Q03036 179 aa12.9□□□□□ -0.34
SPC25YER018C BRN1P38170 754 aa12.89□□□□□ -0.35
SPC25YER018C HAL5P38970 855 aaKnown RBP12.89□□□□□ -0.35
SPC25YER018C LCB1P25045 558 aaKnown RBP12.88□□□□□ -0.35
SPC25YER018C PIB2P53191 635 aa12.88□□□□□ -0.35
SPC25YER018C FAS2P19097 1887 aaKnown RBP12.88□□□□□ -0.35
SPC25YER018C KTR1P27810 393 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms