RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	CWC15	Q03772	175 aa	Known RBP	7.64	□□□□□ -1.19
NSE3	YDR288W	KAR5	Q04746	504 aa		7.64	□□□□□ -1.19
NSE3	YDR288W	SRF1	Q12516	437 aa		7.64	□□□□□ -1.19
NSE3	YDR288W	PNP1	Q05788	311 aa		7.63	□□□□□ -1.19
NSE3	YDR288W	ARG82	P07250	355 aa		7.62	□□□□□ -1.19
NSE3	YDR288W	SRS2	P12954	1174 aa		7.62	□□□□□ -1.19
NSE3	YDR288W	UTP7	P40055	554 aa	Known RBP	7.62	□□□□□ -1.19
NSE3	YDR288W	MSB3	P48566	633 aa	Predicted RBP	7.62	□□□□□ -1.19
NSE3	YDR288W	FUR4	P05316	633 aa	Known RBP	7.6	□□□□□ -1.19
NSE3	YDR288W	UBP1	P25037	809 aa		7.6	□□□□□ -1.19
NSE3	YDR288W	TPS3	P38426	1054 aa	Known RBP	7.6	□□□□□ -1.19
NSE3	YDR288W	ALA1	P40825	983 aa	Known RBP	7.59	□□□□□ -1.19
NSE3	YDR288W	ALD4	P46367	519 aa	Known RBP	7.59	□□□□□ -1.19
NSE3	YDR288W	RRN6	P32786	894 aa		7.58	□□□□□ -1.2
NSE3	YDR288W	NGR1	P32831	672 aa	Known RBP	7.58	□□□□□ -1.2
NSE3	YDR288W	SSF1	P38789	453 aa	Predicted RBP	7.58	□□□□□ -1.2
NSE3	YDR288W	RGA1	P39083	1007 aa		7.58	□□□□□ -1.2
NSE3	YDR288W	SUM1	P46676	1062 aa		7.57	□□□□□ -1.2
NSE3	YDR288W	NOP8	Q08287	484 aa	Predicted RBP	7.57	□□□□□ -1.2
NSE3	YDR288W	YBL113C	Q7M4S9	792 aa		7.57	□□□□□ -1.2
NSE3	YDR288W	TRK1	P12685	1235 aa		7.56	□□□□□ -1.2
NSE3	YDR288W	AAD14	P42884	376 aa		7.56	□□□□□ -1.2
NSE3	YDR288W	PTK2	P47116	818 aa	Known RBP	7.56	□□□□□ -1.2
NSE3	YDR288W	YJR115W	P47152	169 aa		7.56	□□□□□ -1.2
NSE3	YDR288W	FOX2	Q02207	900 aa	Known RBP	7.54	□□□□□ -1.2
NSE3	YDR288W	SUV3	P32580	737 aa		7.53	□□□□□ -1.2
NSE3	YDR288W	GRS1	P38088	690 aa	Known RBP	7.53	□□□□□ -1.2
NSE3	YDR288W	MCM1	P11746	286 aa		7.52	□□□□□ -1.21
NSE3	YDR288W	DLD1	P32891	587 aa		7.52	□□□□□ -1.21
NSE3	YDR288W	GLO3	P38682	493 aa	Known RBP	7.52	□□□□□ -1.21
NSE3	YDR288W	ERP5	P38819	212 aa		7.52	□□□□□ -1.21
NSE3	YDR288W	STM1	P39015	273 aa	Known RBP	7.52	□□□□□ -1.21
NSE3	YDR288W	GCR2	Q01722	534 aa		7.52	□□□□□ -1.21
NSE3	YDR288W	BOL3	P39724	118 aa		7.51	□□□□□ -1.21
NSE3	YDR288W	ISC10	P32645	267 aa		7.5	□□□□□ -1.21
NSE3	YDR288W	AHP1	P38013	176 aa	Known RBP	7.5	□□□□□ -1.21
NSE3	YDR288W	YBR197C	P38306	217 aa		7.5	□□□□□ -1.21
NSE3	YDR288W	LSC2	P53312	427 aa		7.5	□□□□□ -1.21
NSE3	YDR288W	YPQ2	Q06328	317 aa		7.5	□□□□□ -1.21
NSE3	YDR288W	SCD5	P34758	872 aa		7.49	□□□□□ -1.21
NSE3	YDR288W	QDR1	P40475	563 aa		7.49	□□□□□ -1.21
NSE3	YDR288W	NUP85	P46673	744 aa		7.49	□□□□□ -1.21
NSE3	YDR288W	ATG1	P53104	897 aa		7.49	□□□□□ -1.21
NSE3	YDR288W	MSN5	P52918	1224 aa		7.48	□□□□□ -1.21
NSE3	YDR288W	SSN3	P39073	555 aa		7.47	□□□□□ -1.21
NSE3	YDR288W	YTA6	P40328	754 aa		7.47	□□□□□ -1.21
NSE3	YDR288W	BRE2	P43132	505 aa		7.47	□□□□□ -1.21
NSE3	YDR288W	CAB1	Q04430	367 aa		7.47	□□□□□ -1.21
NSE3	YDR288W	Q0182	Q9ZZW1	134 aa		7.47	□□□□□ -1.21
NSE3	YDR288W	YLR346C	Q06139	101 aa		7.46	□□□□□ -1.22
NSE3	YDR288W	LSO1	Q3E827	93 aa		7.46	□□□□□ -1.22
NSE3	YDR288W	TRL1	P09880	827 aa	Known RBP	7.45	□□□□□ -1.22
NSE3	YDR288W	SEC20	P28791	383 aa		7.45	□□□□□ -1.22
NSE3	YDR288W	HXT5	P38695	592 aa		7.45	□□□□□ -1.22
NSE3	YDR288W	ACF4	P47129	309 aa		7.45	□□□□□ -1.22
NSE3	YDR288W	YJR098C	P47139	656 aa		7.45	□□□□□ -1.22
NSE3	YDR288W	YHL050C	P38721	697 aa		7.44	□□□□□ -1.22
NSE3	YDR288W	YHR219W	P38900	624 aa		7.44	□□□□□ -1.22
NSE3	YDR288W	MDJ2	P42834	146 aa		7.44	□□□□□ -1.22
NSE3	YDR288W	JJJ2	P46997	583 aa		7.44	□□□□□ -1.22
NSE3	YDR288W	SEN54	Q02825	467 aa	Predicted RBP	7.44	□□□□□ -1.22
NSE3	YDR288W	MRPL33	P20084	86 aa		7.43	□□□□□ -1.22
NSE3	YDR288W	HEM3	P28789	327 aa		7.43	□□□□□ -1.22
NSE3	YDR288W	IRE1	P32361	1115 aa		7.43	□□□□□ -1.22
NSE3	YDR288W	DAL1	P32375	460 aa		7.43	□□□□□ -1.22
NSE3	YDR288W	SPR3	P41901	512 aa		7.43	□□□□□ -1.22
NSE3	YDR288W	UBP2	Q01476	1272 aa		7.43	□□□□□ -1.22
NSE3	YDR288W	MLF3	P32047	452 aa		7.42	□□□□□ -1.22
NSE3	YDR288W	TCB1	Q12466	1186 aa		7.42	□□□□□ -1.22
NSE3	YDR288W	IPL1	P38991	367 aa		7.41	□□□□□ -1.22
NSE3	YDR288W	THI12	P42883	340 aa		7.41	□□□□□ -1.22
NSE3	YDR288W	THI5	P43534	340 aa		7.41	□□□□□ -1.22
NSE3	YDR288W	THI11	P47183	340 aa		7.41	□□□□□ -1.22
NSE3	YDR288W	SUT1	P53032	299 aa	Known RBP	7.41	□□□□□ -1.22
NSE3	YDR288W	YNL165W	P53891	406 aa		7.41	□□□□□ -1.22
NSE3	YDR288W	UTP4	Q06679	776 aa	Known RBP	7.41	□□□□□ -1.22
NSE3	YDR288W	THI13	Q07748	340 aa		7.41	□□□□□ -1.22
NSE3	YDR288W	MSC6	Q08818	692 aa	Known RBP	7.41	□□□□□ -1.22
NSE3	YDR288W	BOI1	P38041	980 aa	Known RBP	7.4	□□□□□ -1.22
NSE3	YDR288W	VTC4	P47075	721 aa		7.4	□□□□□ -1.22
NSE3	YDR288W	VMA3	P25515	160 aa		7.39	□□□□□ -1.23
NSE3	YDR288W	LDH1	P38139	375 aa		7.39	□□□□□ -1.23
NSE3	YDR288W	DYS1	P38791	387 aa		7.38	□□□□□ -1.23
NSE3	YDR288W	MTO1	P53070	669 aa		7.38	□□□□□ -1.23
NSE3	YDR288W	SHM1	P37292	490 aa	Predicted RBP	7.37	□□□□□ -1.23
NSE3	YDR288W	FIR1	P40020	876 aa		7.37	□□□□□ -1.23
NSE3	YDR288W	QDR2	P40474	542 aa		7.37	□□□□□ -1.23
NSE3	YDR288W	NUT2	Q06213	157 aa		7.37	□□□□□ -1.23
NSE3	YDR288W	OPT2	Q06593	877 aa		7.37	□□□□□ -1.23
NSE3	YDR288W	RPB10	P22139	70 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	KAP122	P32767	1081 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	SLA1	P32790	1244 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	UFD2	P54860	961 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	TRS120	Q04183	1289 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	APC11	Q12157	165 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	TY1A-DR3	Q12441	440 aa		7.36	□□□□□ -1.23
NSE3	YDR288W	RPS31	P05759	152 aa	Known RBP	7.35	□□□□□ -1.23
NSE3	YDR288W	PDC6	P26263	563 aa	Known RBP	7.35	□□□□□ -1.23
NSE3	YDR288W	PPX1	P38698	397 aa		7.35	□□□□□ -1.23
NSE3	YDR288W	HXT8	P40886	569 aa		7.35	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms