RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C NOP14Q99207 810 aaKnown RBP5.21□□□□□ -1.57
PRP28YDR243C CDC4P07834 779 aa5.21□□□□□ -1.58
PRP28YDR243C KIN1P13185 1064 aa5.21□□□□□ -1.58
PRP28YDR243C BRN1P38170 754 aa5.21□□□□□ -1.58
PRP28YDR243C TPM2P40414 161 aa5.21□□□□□ -1.58
PRP28YDR243C RSC1P53236 928 aa5.21□□□□□ -1.58
PRP28YDR243C HST2P53686 357 aa5.21□□□□□ -1.58
PRP28YDR243C VPS60Q03390 229 aa5.21□□□□□ -1.58
PRP28YDR243C YMR196WQ04336 1088 aa5.21□□□□□ -1.58
PRP28YDR243C AGE1Q04412 482 aa5.21□□□□□ -1.58
PRP28YDR243C PCT1P13259 424 aa5.2□□□□□ -1.58
PRP28YDR243C SCJ1P25303 377 aa5.2□□□□□ -1.58
PRP28YDR243C ARL1P38116 183 aaKnown RBP5.2□□□□□ -1.58
PRP28YDR243C TCD1P38756 429 aa5.2□□□□□ -1.58
PRP28YDR243C HOS4P40480 1083 aa5.2□□□□□ -1.58
PRP28YDR243C RNT1Q02555 471 aa5.2□□□□□ -1.58
PRP28YDR243C VPS30Q02948 557 aa5.2□□□□□ -1.58
PRP28YDR243C NFI1Q12216 726 aa5.2□□□□□ -1.58
PRP28YDR243C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
PRP28YDR243C RAD2P07276 1031 aa5.19□□□□□ -1.58
PRP28YDR243C NAB3P38996 802 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
PRP28YDR243C RRN7P40992 514 aa5.19□□□□□ -1.58
PRP28YDR243C ORM2Q06144 216 aa5.19□□□□□ -1.58
PRP28YDR243C GGA1Q06336 557 aa5.19□□□□□ -1.58
PRP28YDR243C YOR389WQ08912 624 aa5.19□□□□□ -1.58
PRP28YDR243C CFT2Q12102 859 aaPredicted RBP5.19□□□□□ -1.58
PRP28YDR243C RAD3P06839 778 aa5.19□□□□□ -1.58
PRP28YDR243C KAR3P17119 729 aa5.19□□□□□ -1.58
PRP28YDR243C VPS24P36095 224 aaKnown RBP5.19□□□□□ -1.58
PRP28YDR243C ISW1P38144 1129 aa5.19□□□□□ -1.58
PRP28YDR243C BRL1P38770 471 aa5.19□□□□□ -1.58
PRP28YDR243C RTT106P40161 455 aa5.19□□□□□ -1.58
PRP28YDR243C TUB4P53378 473 aa5.19□□□□□ -1.58
PRP28YDR243C NDL1Q06568 189 aa5.19□□□□□ -1.58
PRP28YDR243C SSM4P40318 1319 aa5.18□□□□□ -1.58
PRP28YDR243C TY4B-PA0A0B7P3V8 1104 aa5.18□□□□□ -1.58
PRP28YDR243C SLY41P22215 453 aa5.18□□□□□ -1.58
PRP28YDR243C KTR1P27810 393 aaKnown RBP5.18□□□□□ -1.58
PRP28YDR243C BDP1P46678 594 aa5.18□□□□□ -1.58
PRP28YDR243C PXR1P53335 271 aaPredicted RBP5.18□□□□□ -1.58
PRP28YDR243C TYW1Q08960 810 aaKnown RBP5.18□□□□□ -1.58
PRP28YDR243C PDR10P51533 1564 aa5.18□□□□□ -1.58
PRP28YDR243C GLN1P32288 370 aaKnown RBP5.17□□□□□ -1.58
PRP28YDR243C ZUO1P32527 433 aaKnown RBP5.17□□□□□ -1.58
PRP28YDR243C PAC1P39946 494 aaKnown RBP5.17□□□□□ -1.58
PRP28YDR243C ITC1P53125 1264 aa5.17□□□□□ -1.58
PRP28YDR243C COG8Q04632 607 aa5.17□□□□□ -1.58
PRP28YDR243C MMP1Q12372 583 aa5.17□□□□□ -1.58
PRP28YDR243C YOL087CQ99247 1116 aa5.17□□□□□ -1.58
PRP28YDR243C CLN1P20437 546 aa5.16□□□□□ -1.58
PRP28YDR243C PAT1P25644 796 aaKnown RBP5.16□□□□□ -1.58
PRP28YDR243C PSO2P30620 661 aa5.16□□□□□ -1.58
PRP28YDR243C PUP2P32379 260 aa5.16□□□□□ -1.58
PRP28YDR243C SWH1P35845 1188 aa5.16□□□□□ -1.58
PRP28YDR243C YNL050CP53952 270 aa5.16□□□□□ -1.58
PRP28YDR243C FRK1Q03002 865 aaPredicted RBP5.16□□□□□ -1.58
PRP28YDR243C MDM38Q08179 573 aa5.16□□□□□ -1.58
PRP28YDR243C SMC4Q12267 1418 aa5.16□□□□□ -1.58
PRP28YDR243C ESS1P22696 170 aa5.16□□□□□ -1.58
PRP28YDR243C PHO87P25360 923 aa5.16□□□□□ -1.58
PRP28YDR243C SPT5P27692 1063 aaKnown RBP5.16□□□□□ -1.58
PRP28YDR243C MET22P32179 357 aa5.16□□□□□ -1.58
PRP28YDR243C MTR4P47047 1073 aaKnown RBP5.16□□□□□ -1.58
PRP28YDR243C CSN12P47130 423 aa5.16□□□□□ -1.58
PRP28YDR243C RCF1Q03713 159 aa5.16□□□□□ -1.58
PRP28YDR243C HED1Q03937 162 aa5.16□□□□□ -1.58
PRP28YDR243C ENV9Q08651 330 aa5.16□□□□□ -1.58
PRP28YDR243C LSP1Q12230 341 aaKnown RBP5.16□□□□□ -1.58
PRP28YDR243C SEC39Q12745 709 aa5.16□□□□□ -1.58
PRP28YDR243C THO2P53552 1597 aaKnown RBP5.15□□□□□ -1.58
PRP28YDR243C IAH1P41734 238 aa5.15□□□□□ -1.58
PRP28YDR243C IMH1Q06704 911 aaKnown RBP5.15□□□□□ -1.58
PRP28YDR243C IRC20Q06554 1556 aa5.15□□□□□ -1.59
PRP28YDR243C PIM1P36775 1133 aa5.14□□□□□ -1.59
PRP28YDR243C KIP3P53086 805 aaKnown RBP5.14□□□□□ -1.59
PRP28YDR243C HOS3Q02959 697 aaKnown RBP5.14□□□□□ -1.59
PRP28YDR243C UTP13Q05946 817 aaKnown RBP5.14□□□□□ -1.59
PRP28YDR243C PUS1Q12211 544 aaKnown RBP5.14□□□□□ -1.59
PRP28YDR243C GLE1Q12315 538 aa5.14□□□□□ -1.59
PRP28YDR243C RAD9P14737 1309 aa5.14□□□□□ -1.59
PRP28YDR243C MOD5P07884 428 aa5.14□□□□□ -1.59
PRP28YDR243C TAF13P11747 167 aa5.14□□□□□ -1.59
PRP28YDR243C YJU3P28321 313 aa5.14□□□□□ -1.59
PRP28YDR243C TPS3P38426 1054 aaKnown RBP5.14□□□□□ -1.59
PRP28YDR243C NPR3P38742 1146 aa5.14□□□□□ -1.59
PRP28YDR243C VPS27P40343 622 aaKnown RBP5.14□□□□□ -1.59
PRP28YDR243C PUS6P53294 404 aa5.14□□□□□ -1.59
PRP28YDR243C ESC2Q06340 456 aa5.14□□□□□ -1.59
PRP28YDR243C ARR1Q06596 294 aa5.14□□□□□ -1.59
PRP28YDR243C VPS5Q92331 675 aa5.14□□□□□ -1.59
PRP28YDR243C TRM3Q07527 1436 aa5.14□□□□□ -1.59
PRP28YDR243C DAL5P15365 543 aa5.13□□□□□ -1.59
PRP28YDR243C TAF2P23255 1407 aa5.13□□□□□ -1.59
PRP28YDR243C SPT6P23615 1451 aaKnown RBP5.13□□□□□ -1.59
PRP28YDR243C GUA1P38625 525 aaKnown RBP5.13□□□□□ -1.59
PRP28YDR243C YMR102CQ03177 834 aa5.13□□□□□ -1.59
PRP28YDR243C SLP1Q12232 587 aa5.13□□□□□ -1.59
PRP28YDR243C NUP170P38181 1502 aa5.12□□□□□ -1.59
PRP28YDR243C NDC80P40460 691 aa5.12□□□□□ -1.59
PRP28YDR243C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms