RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W ARG8P18544 423 aa8.28□□□□□ -1.08
CDC1YDR182W UGA3P26370 528 aa8.28□□□□□ -1.08
CDC1YDR182W APL2P36000 726 aaPredicted RBP8.28□□□□□ -1.08
CDC1YDR182W PEX21P50091 288 aa8.28□□□□□ -1.08
CDC1YDR182W FPK1P53739 893 aa8.28□□□□□ -1.08
CDC1YDR182W ERO1Q03103 563 aa8.28□□□□□ -1.08
CDC1YDR182W THS1P04801 734 aaKnown RBP8.26□□□□□ -1.09
CDC1YDR182W RTR1P40084 226 aaPredicted RBP8.26□□□□□ -1.09
CDC1YDR182W YNL050CP53952 270 aa8.26□□□□□ -1.09
CDC1YDR182W ZDS2P54786 942 aa8.26□□□□□ -1.09
CDC1YDR182W NSE3Q05541 303 aa8.26□□□□□ -1.09
CDC1YDR182W VPS64Q03944 604 aa8.26□□□□□ -1.09
CDC1YDR182W FAS2P19097 1887 aaKnown RBP8.25□□□□□ -1.09
CDC1YDR182W YBR287WP38355 427 aa8.25□□□□□ -1.09
CDC1YDR182W ATG20Q07528 640 aa8.25□□□□□ -1.09
CDC1YDR182W YPR204WQ08995 1032 aa8.25□□□□□ -1.09
CDC1YDR182W PRD1P25375 712 aa8.24□□□□□ -1.09
CDC1YDR182W CST9Q06032 482 aa8.24□□□□□ -1.09
CDC1YDR182W RET1P22276 1149 aaKnown RBP8.23□□□□□ -1.09
CDC1YDR182W YKU70P32807 602 aa8.23□□□□□ -1.09
CDC1YDR182W COQ4O13525 335 aa8.22□□□□□ -1.09
CDC1YDR182W SIT4P20604 311 aa8.22□□□□□ -1.09
CDC1YDR182W FRD1P32614 470 aaKnown RBP8.22□□□□□ -1.09
CDC1YDR182W RPN1P38764 993 aaKnown RBP8.22□□□□□ -1.09
CDC1YDR182W SHC1P39000 512 aa8.22□□□□□ -1.09
CDC1YDR182W ZDS1P50111 915 aaKnown RBP8.22□□□□□ -1.09
CDC1YDR182W UBP16Q02863 499 aa8.22□□□□□ -1.09
CDC1YDR182W DIB1Q06819 143 aaPredicted RBP8.22□□□□□ -1.09
CDC1YDR182W SAS4Q04003 481 aa8.21□□□□□ -1.09
CDC1YDR182W BMS1Q08965 1183 aaKnown RBP8.21□□□□□ -1.09
CDC1YDR182W LYS2P07702 1392 aa8.21□□□□□ -1.1
CDC1YDR182W GRX6Q12438 231 aa8.2□□□□□ -1.1
CDC1YDR182W GAP1P19145 602 aaPredicted RBP8.19□□□□□ -1.1
CDC1YDR182W THI22Q06490 572 aa8.19□□□□□ -1.1
CDC1YDR182W HAT1Q12341 374 aa8.19□□□□□ -1.1
CDC1YDR182W YLR278CQ05854 1341 aa8.19□□□□□ -1.1
CDC1YDR182W MPP10P47083 593 aaKnown RBP8.19□□□□□ -1.1
CDC1YDR182W RTT109Q07794 436 aa8.19□□□□□ -1.1
CDC1YDR182W RTG2P32608 588 aaKnown RBP8.18□□□□□ -1.1
CDC1YDR182W FCP1Q03254 732 aa8.18□□□□□ -1.1
CDC1YDR182W PKH1Q03407 766 aa8.18□□□□□ -1.1
CDC1YDR182W SYF1Q04048 859 aaPredicted RBP8.18□□□□□ -1.1
CDC1YDR182W FIG2P25653 1609 aa8.17□□□□□ -1.1
CDC1YDR182W HKR1P41809 1802 aa8.17□□□□□ -1.1
CDC1YDR182W TIF4632P39936 914 aaKnown RBP8.17□□□□□ -1.1
CDC1YDR182W MAM1P40065 302 aa8.17□□□□□ -1.1
CDC1YDR182W RPS9BP05755 195 aaKnown RBP8.16□□□□□ -1.1
CDC1YDR182W VHR2P40041 505 aa8.16□□□□□ -1.1
CDC1YDR182W SSK22P25390 1331 aaPredicted RBP8.16□□□□□ -1.1
CDC1YDR182W FET4P40988 552 aa8.15□□□□□ -1.1
CDC1YDR182W SET4P42948 560 aa8.15□□□□□ -1.1
CDC1YDR182W DPL1Q05567 589 aa8.15□□□□□ -1.1
CDC1YDR182W YOL057WQ08225 711 aa8.15□□□□□ -1.1
CDC1YDR182W MSM1P22438 575 aa8.14□□□□□ -1.11
CDC1YDR182W GYP7P48365 746 aa8.14□□□□□ -1.11
CDC1YDR182W AIM7Q12156 149 aa8.14□□□□□ -1.11
CDC1YDR182W SWI1P09547 1314 aa8.13□□□□□ -1.11
CDC1YDR182W MRM1P25270 412 aa8.13□□□□□ -1.11
CDC1YDR182W IOC4Q04213 475 aa8.13□□□□□ -1.11
CDC1YDR182W TPD3P31383 635 aa8.13□□□□□ -1.11
CDC1YDR182W TRM44Q02648 567 aaKnown RBP8.13□□□□□ -1.11
CDC1YDR182W TGL3P40308 642 aa8.12□□□□□ -1.11
CDC1YDR182W VPS4P52917 437 aa8.12□□□□□ -1.11
CDC1YDR182W HEF3P53978 1044 aaKnown RBP8.12□□□□□ -1.11
CDC1YDR182W YDL144CQ07589 356 aa8.12□□□□□ -1.11
CDC1YDR182W GAS5Q08193 484 aa8.12□□□□□ -1.11
CDC1YDR182W GLC3P32775 704 aa8.11□□□□□ -1.11
CDC1YDR182W NUP133P36161 1157 aa8.11□□□□□ -1.11
CDC1YDR182W STV1P37296 890 aa8.11□□□□□ -1.11
CDC1YDR182W DNM1P54861 757 aa8.11□□□□□ -1.11
CDC1YDR182W TIM50Q02776 476 aa8.11□□□□□ -1.11
CDC1YDR182W SRT1Q03175 343 aa8.11□□□□□ -1.11
CDC1YDR182W NSR1P27476 414 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
CDC1YDR182W ETP1P38748 585 aaKnown RBP8.1□□□□□ -1.11
CDC1YDR182W DUS1P53759 423 aaKnown RBP8.1□□□□□ -1.11
CDC1YDR182W TRP5P00931 707 aaKnown RBP8.09□□□□□ -1.11
CDC1YDR182W AFG2P32794 780 aa8.09□□□□□ -1.11
CDC1YDR182W CST6P40535 587 aa8.09□□□□□ -1.11
CDC1YDR182W YDR306CQ06640 478 aa8.09□□□□□ -1.11
CDC1YDR182W YIL089WP40500 205 aa8.08□□□□□ -1.12
CDC1YDR182W GSM1P42950 618 aa8.08□□□□□ -1.12
CDC1YDR182W YGR122WP53272 402 aa8.08□□□□□ -1.12
CDC1YDR182W RPT4P53549 437 aaKnown RBP8.08□□□□□ -1.12
CDC1YDR182W DPH6Q12429 685 aa8.08□□□□□ -1.12
CDC1YDR182W MRP7P12687 371 aa8.07□□□□□ -1.12
CDC1YDR182W HPR1P17629 752 aaKnown RBP8.07□□□□□ -1.12
CDC1YDR182W KRE2P27809 442 aa8.07□□□□□ -1.12
CDC1YDR182W ICP55P40051 511 aa8.07□□□□□ -1.12
CDC1YDR182W EMP47P43555 445 aa8.07□□□□□ -1.12
CDC1YDR182W SPL2P38839 148 aa8.06□□□□□ -1.12
CDC1YDR182W ITC1P53125 1264 aa8.06□□□□□ -1.12
CDC1YDR182W YGR117CP53270 476 aa8.06□□□□□ -1.12
CDC1YDR182W RRG1Q12167 365 aaPredicted RBP8.06□□□□□ -1.12
CDC1YDR182W NGR1P32831 672 aaKnown RBP8.06□□□□□ -1.12
CDC1YDR182W PEA2P40091 420 aa8.06□□□□□ -1.12
CDC1YDR182W THI3Q07471 609 aa8.06□□□□□ -1.12
CDC1YDR182W FLO11P08640 1367 aa8.06□□□□□ -1.12
CDC1YDR182W SWC3P31376 625 aa8.05□□□□□ -1.12
CDC1YDR182W MGM1P32266 881 aa8.05□□□□□ -1.12
CDC1YDR182W YJR008WP47085 338 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms