RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W SOL3P38858 249 aa1.35□□□□□ -2.19
SCC2YDR180W KAR5Q04746 504 aa1.35□□□□□ -2.19
SCC2YDR180W TUM1Q08686 304 aaKnown RBP1.35□□□□□ -2.19
SCC2YDR180W AUS1Q08409 1394 aa1.35□□□□□ -2.19
SCC2YDR180W TRL1P09880 827 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W SUP45P12385 437 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W SPC42P36094 363 aa1.34□□□□□ -2.19
SCC2YDR180W MED8P38304 223 aa1.34□□□□□ -2.19
SCC2YDR180W YHL050CP38721 697 aa1.34□□□□□ -2.19
SCC2YDR180W YHR219WP38900 624 aa1.34□□□□□ -2.19
SCC2YDR180W ILV3P39522 585 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W MVP1P40959 511 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W CTR9P89105 1077 aa1.34□□□□□ -2.19
SCC2YDR180W YEL077CQ3E7X8 1277 aa1.34□□□□□ -2.19
SCC2YDR180W TOM1Q03280 3268 aa1.34□□□□□ -2.19
SCC2YDR180W FKS1P38631 1876 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W ROM2P51862 1356 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W SEC8P32855 1065 aa1.34□□□□□ -2.19
SCC2YDR180W TPS3P38426 1054 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W CST6P40535 587 aa1.34□□□□□ -2.19
SCC2YDR180W CDC73Q06697 393 aa1.34□□□□□ -2.19
SCC2YDR180W ENV9Q08651 330 aa1.34□□□□□ -2.19
SCC2YDR180W GYP5Q12344 894 aa1.34□□□□□ -2.19
SCC2YDR180W CAT8P39113 1433 aa1.34□□□□□ -2.19
SCC2YDR180W FKS3Q04952 1785 aa1.34□□□□□ -2.19
SCC2YDR180W SEC7P11075 2009 aaKnown RBP1.34□□□□□ -2.19
SCC2YDR180W RAV1P47104 1357 aa1.34□□□□□ -2.2
SCC2YDR180W PPG1P32838 368 aa1.34□□□□□ -2.2
SCC2YDR180W SET4P42948 560 aa1.34□□□□□ -2.2
SCC2YDR180W MRX10Q05648 414 aa1.34□□□□□ -2.2
SCC2YDR180W LAM6Q08001 693 aa1.34□□□□□ -2.2
SCC2YDR180W NOT3P06102 836 aaKnown RBP1.34□□□□□ -2.2
SCC2YDR180W MSH1P25846 959 aa1.34□□□□□ -2.2
SCC2YDR180W ELM1P32801 640 aa1.34□□□□□ -2.2
SCC2YDR180W MET1P36150 593 aa1.34□□□□□ -2.2
SCC2YDR180W STM1P39015 273 aaKnown RBP1.34□□□□□ -2.2
SCC2YDR180W VAC8P39968 578 aa1.34□□□□□ -2.2
SCC2YDR180W CHZ1P40019 153 aaPredicted RBP1.34□□□□□ -2.2
SCC2YDR180W RNH70P53331 553 aa1.34□□□□□ -2.2
SCC2YDR180W RIM21P48565 533 aa1.33□□□□□ -2.2
SCC2YDR180W HST2P53686 357 aa1.33□□□□□ -2.2
SCC2YDR180W YOL087CQ99247 1116 aa1.33□□□□□ -2.2
SCC2YDR180W YML133CQ03099 1374 aa1.33□□□□□ -2.2
SCC2YDR180W YLL067CQ07888 1374 aa1.33□□□□□ -2.2
SCC2YDR180W YLL066CQ99208 1374 aa1.33□□□□□ -2.2
SCC2YDR180W KRI1P42846 591 aaKnown RBP1.33□□□□□ -2.2
SCC2YDR180W WHI5Q12416 295 aa1.33□□□□□ -2.2
SCC2YDR180W MCM2P29469 868 aa1.33□□□□□ -2.2
SCC2YDR180W SPC110P32380 944 aa1.33□□□□□ -2.2
SCC2YDR180W HRQ1Q05549 1077 aa1.33□□□□□ -2.2
SCC2YDR180W RDS2P19541 446 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W MBR1P23493 339 aa1.32□□□□□ -2.2
SCC2YDR180W MDJ2P42834 146 aa1.32□□□□□ -2.2
SCC2YDR180W RPS0BP46654 252 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W PEX21P50091 288 aa1.32□□□□□ -2.2
SCC2YDR180W RTS3P53289 263 aa1.32□□□□□ -2.2
SCC2YDR180W ALD6P54115 500 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W ERF2Q06551 359 aa1.32□□□□□ -2.2
SCC2YDR180W CIR2Q08822 631 aa1.32□□□□□ -2.2
SCC2YDR180W UBR2Q07963 1872 aa1.32□□□□□ -2.2
SCC2YDR180W SRP40P32583 406 aaPredicted RBP1.32□□□□□ -2.2
SCC2YDR180W PEP7P32609 515 aa1.32□□□□□ -2.2
SCC2YDR180W PXL1P36166 706 aa1.32□□□□□ -2.2
SCC2YDR180W GLO3P38682 493 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W OCA5P38738 679 aa1.32□□□□□ -2.2
SCC2YDR180W RRT14P40470 206 aa1.32□□□□□ -2.2
SCC2YDR180W FYV10P40492 516 aa1.32□□□□□ -2.2
SCC2YDR180W EMP47P43555 445 aa1.32□□□□□ -2.2
SCC2YDR180W SPR28Q04921 423 aa1.32□□□□□ -2.2
SCC2YDR180W RAD50P12753 1312 aa1.32□□□□□ -2.2
SCC2YDR180W GAL2P13181 574 aa1.32□□□□□ -2.2
SCC2YDR180W TRM1P15565 570 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W CSE4P36012 229 aa1.32□□□□□ -2.2
SCC2YDR180W MSC6Q08818 692 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W MCM16Q12262 181 aa1.32□□□□□ -2.2
SCC2YDR180W KEX2P13134 814 aa1.32□□□□□ -2.2
SCC2YDR180W TSR4P25040 408 aa1.32□□□□□ -2.2
SCC2YDR180W SEC20P28791 383 aa1.32□□□□□ -2.2
SCC2YDR180W YKL091CP33324 310 aaKnown RBP1.32□□□□□ -2.2
SCC2YDR180W SLI15P38283 698 aa1.32□□□□□ -2.2
SCC2YDR180W YAP5P40574 245 aa1.32□□□□□ -2.2
SCC2YDR180W UBP10P53874 792 aaPredicted RBP1.32□□□□□ -2.2
SCC2YDR180W ALD3P54114 506 aa1.32□□□□□ -2.2
SCC2YDR180W PNP1Q05788 311 aa1.32□□□□□ -2.2
SCC2YDR180W PUN1Q06991 263 aa1.32□□□□□ -2.2
SCC2YDR180W YRR1Q12172 810 aa1.32□□□□□ -2.2
SCC2YDR180W PDI1P17967 522 aaKnown RBP1.31□□□□□ -2.2
SCC2YDR180W ECM1P39715 212 aa1.31□□□□□ -2.2
SCC2YDR180W BOL3P39724 118 aa1.31□□□□□ -2.2
SCC2YDR180W MAG2Q06436 670 aaKnown RBP1.31□□□□□ -2.2
SCC2YDR180W MAK16P10962 306 aaPredicted RBP1.31□□□□□ -2.2
SCC2YDR180W CLB5P30283 435 aa1.31□□□□□ -2.2
SCC2YDR180W PEP12P32854 288 aa1.31□□□□□ -2.2
SCC2YDR180W GTT3P39996 337 aa1.31□□□□□ -2.2
SCC2YDR180W TBF1Q02457 562 aa1.31□□□□□ -2.2
SCC2YDR180W FRT1Q99332 602 aa1.31□□□□□ -2.2
SCC2YDR180W MAD1P40957 749 aa1.31□□□□□ -2.2
SCC2YDR180W NNF1P47149 201 aa1.31□□□□□ -2.2
SCC2YDR180W SVF1Q05515 481 aa1.31□□□□□ -2.2
SCC2YDR180W RRP15Q06511 250 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms