RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C SPP1Q03012 353 aa7.27□□□□□ -1.25
MDH3YDL078C CTI6Q08923 506 aa7.27□□□□□ -1.25
MDH3YDL078C UTP10P42945 1769 aaKnown RBP7.26□□□□□ -1.25
MDH3YDL078C LPD1P09624 499 aaKnown RBP7.26□□□□□ -1.25
MDH3YDL078C WSC3Q12215 556 aa7.26□□□□□ -1.25
MDH3YDL078C LYS2P07702 1392 aa7.25□□□□□ -1.25
MDH3YDL078C YER156CP40093 338 aaKnown RBP7.25□□□□□ -1.25
MDH3YDL078C CWH41P53008 833 aa7.25□□□□□ -1.25
MDH3YDL078C RAT1Q02792 1006 aaKnown RBP7.25□□□□□ -1.25
MDH3YDL078C PFF1P38244 976 aa7.24□□□□□ -1.25
MDH3YDL078C YGL082WP53155 381 aa7.24□□□□□ -1.25
MDH3YDL078C DIB1Q06819 143 aaPredicted RBP7.23□□□□□ -1.25
MDH3YDL078C BMS1Q08965 1183 aaKnown RBP7.23□□□□□ -1.25
MDH3YDL078C MPP10P47083 593 aaKnown RBP7.22□□□□□ -1.25
MDH3YDL078C KIN4Q01919 800 aa7.22□□□□□ -1.25
MDH3YDL078C THI22Q06490 572 aa7.22□□□□□ -1.25
MDH3YDL078C COQ4O13525 335 aa7.21□□□□□ -1.26
MDH3YDL078C ARG8P18544 423 aa7.21□□□□□ -1.26
MDH3YDL078C GYP7P48365 746 aa7.21□□□□□ -1.26
MDH3YDL078C IRC3Q06683 689 aa7.21□□□□□ -1.26
MDH3YDL078C YDL144CQ07589 356 aa7.21□□□□□ -1.26
MDH3YDL078C BDF2Q07442 638 aa7.2□□□□□ -1.26
MDH3YDL078C RTT109Q07794 436 aa7.2□□□□□ -1.26
MDH3YDL078C YPR204WQ08995 1032 aa7.2□□□□□ -1.26
MDH3YDL078C SMY1P32364 656 aaKnown RBP7.19□□□□□ -1.26
MDH3YDL078C APL2P36000 726 aaPredicted RBP7.19□□□□□ -1.26
MDH3YDL078C YBR287WP38355 427 aa7.19□□□□□ -1.26
MDH3YDL078C LEO1P38439 464 aa7.19□□□□□ -1.26
MDH3YDL078C ERO1Q03103 563 aa7.19□□□□□ -1.26
MDH3YDL078C VPS64Q03944 604 aa7.19□□□□□ -1.26
MDH3YDL078C YOL057WQ08225 711 aa7.19□□□□□ -1.26
MDH3YDL078C RPS9BP05755 195 aaKnown RBP7.18□□□□□ -1.26
MDH3YDL078C SIT4P20604 311 aa7.18□□□□□ -1.26
MDH3YDL078C TPD3P31383 635 aa7.18□□□□□ -1.26
MDH3YDL078C SQS1P53866 767 aaKnown RBP7.18□□□□□ -1.26
MDH3YDL078C ZDS2P54786 942 aa7.18□□□□□ -1.26
MDH3YDL078C HAT1Q12341 374 aa7.18□□□□□ -1.26
MDH3YDL078C HEF3P53978 1044 aaKnown RBP7.17□□□□□ -1.26
MDH3YDL078C DNM1P54861 757 aa7.17□□□□□ -1.26
MDH3YDL078C SSK22P25390 1331 aaPredicted RBP7.17□□□□□ -1.26
MDH3YDL078C RPP0P05317 312 aaKnown RBP7.16□□□□□ -1.26
MDH3YDL078C FPK1P53739 893 aa7.16□□□□□ -1.26
MDH3YDL078C SYF1Q04048 859 aaPredicted RBP7.16□□□□□ -1.26
MDH3YDL078C YPR148CQ06523 435 aa7.16□□□□□ -1.26
MDH3YDL078C PMD1P32634 1753 aa7.15□□□□□ -1.26
MDH3YDL078C MRM1P25270 412 aa7.15□□□□□ -1.26
MDH3YDL078C TIF11P38912 153 aaKnown RBP7.15□□□□□ -1.26
MDH3YDL078C YJL171CP46992 396 aa7.15□□□□□ -1.26
MDH3YDL078C SRT1Q03175 343 aa7.15□□□□□ -1.26
MDH3YDL078C GRX6Q12438 231 aa7.15□□□□□ -1.26
MDH3YDL078C ICL1P28240 557 aaPredicted RBP7.14□□□□□ -1.27
MDH3YDL078C RAM2P29703 316 aa7.14□□□□□ -1.27
MDH3YDL078C YKU70P32807 602 aa7.14□□□□□ -1.27
MDH3YDL078C CST6P40535 587 aa7.14□□□□□ -1.27
MDH3YDL078C PKH1Q03407 766 aa7.14□□□□□ -1.27
MDH3YDL078C TOP1P04786 769 aa7.13□□□□□ -1.27
MDH3YDL078C CAF20P12962 161 aaKnown RBP7.13□□□□□ -1.27
MDH3YDL078C FRD1P32614 470 aaKnown RBP7.13□□□□□ -1.27
MDH3YDL078C RPN1P38764 993 aaKnown RBP7.13□□□□□ -1.27
MDH3YDL078C SHC1P39000 512 aa7.13□□□□□ -1.27
MDH3YDL078C RPS0BP46654 252 aaKnown RBP7.13□□□□□ -1.27
MDH3YDL078C YJR008WP47085 338 aa7.13□□□□□ -1.27
MDH3YDL078C UBP16Q02863 499 aa7.13□□□□□ -1.27
MDH3YDL078C SAS4Q04003 481 aa7.13□□□□□ -1.27
MDH3YDL078C YDR306CQ06640 478 aa7.13□□□□□ -1.27
MDH3YDL078C SWI1P09547 1314 aa7.12□□□□□ -1.27
MDH3YDL078C VPS27P40343 622 aaKnown RBP7.12□□□□□ -1.27
MDH3YDL078C ATG20Q07528 640 aa7.12□□□□□ -1.27
MDH3YDL078C MRP7P12687 371 aa7.11□□□□□ -1.27
MDH3YDL078C SLI15P38283 698 aa7.11□□□□□ -1.27
MDH3YDL078C PEX21P50091 288 aa7.11□□□□□ -1.27
MDH3YDL078C AIR2Q12476 344 aaKnown RBP7.11□□□□□ -1.27
MDH3YDL078C SUI2P20459 304 aaKnown RBP7.1□□□□□ -1.27
MDH3YDL078C MNN4P36044 1178 aa7.1□□□□□ -1.27
MDH3YDL078C NUP133P36161 1157 aa7.1□□□□□ -1.27
MDH3YDL078C FAS2P19097 1887 aaKnown RBP7.1□□□□□ -1.27
MDH3YDL078C RET1P22276 1149 aaKnown RBP7.09□□□□□ -1.27
MDH3YDL078C SET1P38827 1080 aaKnown RBP7.09□□□□□ -1.27
MDH3YDL078C FCP1Q03254 732 aa7.09□□□□□ -1.27
MDH3YDL078C CDC45Q08032 650 aa7.09□□□□□ -1.27
MDH3YDL078C NOP8Q08287 484 aaPredicted RBP7.09□□□□□ -1.27
MDH3YDL078C SSA4P22202 642 aaKnown RBP7.08□□□□□ -1.28
MDH3YDL078C ITC1P53125 1264 aa7.08□□□□□ -1.28
MDH3YDL078C PIB1Q06651 286 aa7.08□□□□□ -1.28
MDH3YDL078C MAK21Q12176 1025 aaKnown RBP7.08□□□□□ -1.28
MDH3YDL078C SUP35P05453 685 aaKnown RBP7.07□□□□□ -1.28
MDH3YDL078C MSM1P22438 575 aa7.07□□□□□ -1.28
MDH3YDL078C DPL1Q05567 589 aa7.07□□□□□ -1.28
MDH3YDL078C PUS5Q06244 254 aa7.07□□□□□ -1.28
MDH3YDL078C PSH1Q12161 406 aa7.07□□□□□ -1.28
MDH3YDL078C DPH6Q12429 685 aa7.07□□□□□ -1.28
MDH3YDL078C HKR1P41809 1802 aa7.06□□□□□ -1.28
MDH3YDL078C THS1P04801 734 aaKnown RBP7.06□□□□□ -1.28
MDH3YDL078C YPP1P46951 817 aa7.06□□□□□ -1.28
MDH3YDL078C UBX2Q04228 584 aa7.06□□□□□ -1.28
MDH3YDL078C SAC3P46674 1301 aa7.05□□□□□ -1.28
MDH3YDL078C KRE2P27809 442 aa7.05□□□□□ -1.28
MDH3YDL078C RTG2P32608 588 aaKnown RBP7.05□□□□□ -1.28
MDH3YDL078C ICP55P40051 511 aa7.05□□□□□ -1.28
MDH3YDL078C ULI1P43604 169 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms