RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	YJR098C	P47139	656 aa		5.62	□□□□□ -1.51
PBP4	YDL053C	LSC2	P53312	427 aa		5.61	□□□□□ -1.51
PBP4	YDL053C	MET22	P32179	357 aa		5.6	□□□□□ -1.51
PBP4	YDL053C	CYT1	P07143	309 aa		5.59	□□□□□ -1.51
PBP4	YDL053C	SSA1	P10591	642 aa	Known RBP	5.59	□□□□□ -1.51
PBP4	YDL053C	SUM1	P46676	1062 aa		5.59	□□□□□ -1.51
PBP4	YDL053C	OPT2	Q06593	877 aa		5.59	□□□□□ -1.51
PBP4	YDL053C	UBP1	P25037	809 aa		5.58	□□□□□ -1.52
PBP4	YDL053C	YDR444W	Q04093	687 aa		5.58	□□□□□ -1.52
PBP4	YDL053C	LCB5	Q06147	687 aa	Known RBP	5.58	□□□□□ -1.52
PBP4	YDL053C	YPQ2	Q06328	317 aa		5.58	□□□□□ -1.52
PBP4	YDL053C	TCB1	Q12466	1186 aa		5.58	□□□□□ -1.52
PBP4	YDL053C	VAN1	P23642	535 aa		5.57	□□□□□ -1.52
PBP4	YDL053C	SSN3	P39073	555 aa		5.57	□□□□□ -1.52
PBP4	YDL053C	YLR346C	Q06139	101 aa		5.57	□□□□□ -1.52
PBP4	YDL053C	GLY1	P37303	387 aa	Known RBP	5.56	□□□□□ -1.52
PBP4	YDL053C	MSN5	P52918	1224 aa		5.56	□□□□□ -1.52
PBP4	YDL053C	MCM1	P11746	286 aa		5.55	□□□□□ -1.52
PBP4	YDL053C	ALA1	P40825	983 aa	Known RBP	5.55	□□□□□ -1.52
PBP4	YDL053C	VTC4	P47075	721 aa		5.55	□□□□□ -1.52
PBP4	YDL053C	RPL34A	P87262	121 aa	Predicted RBP	5.55	□□□□□ -1.52
PBP4	YDL053C	UBP2	Q01476	1272 aa		5.55	□□□□□ -1.52
PBP4	YDL053C	TRS33	Q99394	268 aa		5.55	□□□□□ -1.52
PBP4	YDL053C	DAL1	P32375	460 aa		5.54	□□□□□ -1.52
PBP4	YDL053C	GEF1	P37020	779 aa		5.54	□□□□□ -1.52
PBP4	YDL053C	SCW11	P53189	542 aa		5.54	□□□□□ -1.52
PBP4	YDL053C	PUF6	Q04373	656 aa	Known RBP	5.54	□□□□□ -1.52
PBP4	YDL053C	SUV3	P32580	737 aa		5.53	□□□□□ -1.52
PBP4	YDL053C	NGR1	P32831	672 aa	Known RBP	5.53	□□□□□ -1.52
PBP4	YDL053C	AHP1	P38013	176 aa	Known RBP	5.53	□□□□□ -1.52
PBP4	YDL053C	JJJ2	P46997	583 aa		5.53	□□□□□ -1.52
PBP4	YDL053C	CWC15	Q03772	175 aa	Known RBP	5.53	□□□□□ -1.52
PBP4	YDL053C	TY1A-BL	Q12266	440 aa		5.53	□□□□□ -1.52
PBP4	YDL053C	TY1A-DR3	Q12441	440 aa		5.53	□□□□□ -1.52
PBP4	YDL053C	SLA1	P32790	1244 aa		5.52	□□□□□ -1.53
PBP4	YDL053C	SHM1	P37292	490 aa	Predicted RBP	5.52	□□□□□ -1.53
PBP4	YDL053C	CDC19	P00549	500 aa	Known RBP	5.51	□□□□□ -1.53
PBP4	YDL053C	GAR1	P28007	205 aa	Known RBP	5.51	□□□□□ -1.53
PBP4	YDL053C	TPS3	P38426	1054 aa	Known RBP	5.51	□□□□□ -1.53
PBP4	YDL053C	OSH7	P38755	437 aa		5.51	□□□□□ -1.53
PBP4	YDL053C	CWH41	P53008	833 aa		5.51	□□□□□ -1.53
PBP4	YDL053C	PUN1	Q06991	263 aa		5.51	□□□□□ -1.53
PBP4	YDL053C	ALD4	P46367	519 aa	Known RBP	5.5	□□□□□ -1.53
PBP4	YDL053C	YNL165W	P53891	406 aa		5.5	□□□□□ -1.53
PBP4	YDL053C	RPS31	P05759	152 aa	Known RBP	5.49	□□□□□ -1.53
PBP4	YDL053C	SRS2	P12954	1174 aa		5.49	□□□□□ -1.53
PBP4	YDL053C	IRE1	P32361	1115 aa		5.49	□□□□□ -1.53
PBP4	YDL053C	HXT5	P38695	592 aa		5.49	□□□□□ -1.53
PBP4	YDL053C	UBP15	P50101	1230 aa		5.48	□□□□□ -1.53
PBP4	YDL053C	CAB1	Q04430	367 aa		5.48	□□□□□ -1.53
PBP4	YDL053C	PNP1	Q05788	311 aa		5.48	□□□□□ -1.53
PBP4	YDL053C	MLF3	P32047	452 aa		5.47	□□□□□ -1.53
PBP4	YDL053C	SCD5	P34758	872 aa		5.47	□□□□□ -1.53
PBP4	YDL053C	ACO2	P39533	789 aa		5.47	□□□□□ -1.53
PBP4	YDL053C	CAF120	P53836	1060 aa		5.47	□□□□□ -1.53
PBP4	YDL053C	NAM8	Q00539	523 aa	Known RBP	5.47	□□□□□ -1.53
PBP4	YDL053C	FOX2	Q02207	900 aa	Known RBP	5.47	□□□□□ -1.53
PBP4	YDL053C	PSH1	Q12161	406 aa		5.47	□□□□□ -1.53
PBP4	YDL053C	Q0182	Q9ZZW1	134 aa		5.47	□□□□□ -1.53
PBP4	YDL053C	PDC6	P26263	563 aa	Known RBP	5.46	□□□□□ -1.54
PBP4	YDL053C	CDC3	P32457	520 aa	Known RBP	5.46	□□□□□ -1.54
PBP4	YDL053C	YBR197C	P38306	217 aa		5.46	□□□□□ -1.54
PBP4	YDL053C	YIR007W	P40566	764 aa		5.46	□□□□□ -1.54
PBP4	YDL053C	ROG3	P43602	733 aa		5.46	□□□□□ -1.54
PBP4	YDL053C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
PBP4	YDL053C	YTA6	P40328	754 aa		5.45	□□□□□ -1.54
PBP4	YDL053C	YPL062W	Q02781	134 aa		5.45	□□□□□ -1.54
PBP4	YDL053C	TY1A-MR1	Q04215	440 aa		5.45	□□□□□ -1.54
PBP4	YDL053C	UTP4	Q06679	776 aa	Known RBP	5.45	□□□□□ -1.54
PBP4	YDL053C	YDL176W	Q12027	708 aa		5.45	□□□□□ -1.54
PBP4	YDL053C	ISC10	P32645	267 aa		5.44	□□□□□ -1.54
PBP4	YDL053C	CCP1	P00431	361 aa		5.43	□□□□□ -1.54
PBP4	YDL053C	LEU1	P07264	779 aa	Known RBP	5.43	□□□□□ -1.54
PBP4	YDL053C	BOL3	P39724	118 aa		5.43	□□□□□ -1.54
PBP4	YDL053C	ALD2	P47771	506 aa		5.43	□□□□□ -1.54
PBP4	YDL053C	KAR5	Q04746	504 aa		5.43	□□□□□ -1.54
PBP4	YDL053C	MRPL33	P20084	86 aa		5.42	□□□□□ -1.54
PBP4	YDL053C	FUR4	P05316	633 aa	Known RBP	5.41	□□□□□ -1.54
PBP4	YDL053C	RRN6	P32786	894 aa		5.41	□□□□□ -1.54
PBP4	YDL053C	BOI1	P38041	980 aa	Known RBP	5.41	□□□□□ -1.54
PBP4	YDL053C	VMA3	P25515	160 aa		5.4	□□□□□ -1.54
PBP4	YDL053C	QDR2	P40474	542 aa		5.4	□□□□□ -1.54
PBP4	YDL053C	MTO1	P53070	669 aa		5.4	□□□□□ -1.54
PBP4	YDL053C	CUZ1	P53899	274 aa		5.4	□□□□□ -1.54
PBP4	YDL053C	HAT1	Q12341	374 aa		5.4	□□□□□ -1.54
PBP4	YDL053C	LSO1	Q3E827	93 aa		5.4	□□□□□ -1.54
PBP4	YDL053C	KAP122	P32767	1081 aa		5.39	□□□□□ -1.55
PBP4	YDL053C	YMR265C	Q03508	461 aa	Known RBP	5.39	□□□□□ -1.55
PBP4	YDL053C	STB3	Q12427	513 aa		5.39	□□□□□ -1.55
PBP4	YDL053C	RGP1	P16664	663 aa		5.38	□□□□□ -1.55
PBP4	YDL053C	DIT1	P21623	536 aa		5.38	□□□□□ -1.55
PBP4	YDL053C	MRPL16	P38064	232 aa		5.38	□□□□□ -1.55
PBP4	YDL053C	RPC31	P17890	251 aa		5.37	□□□□□ -1.55
PBP4	YDL053C	RPB10	P22139	70 aa		5.37	□□□□□ -1.55
PBP4	YDL053C	GLO3	P38682	493 aa	Known RBP	5.37	□□□□□ -1.55
PBP4	YDL053C	ATG1	P53104	897 aa		5.37	□□□□□ -1.55
PBP4	YDL053C	APC11	Q12157	165 aa		5.37	□□□□□ -1.55
PBP4	YDL053C	KTR2	P33550	425 aa		5.36	□□□□□ -1.55
PBP4	YDL053C	LDH1	P38139	375 aa		5.36	□□□□□ -1.55
PBP4	YDL053C	SSF1	P38789	453 aa	Predicted RBP	5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms