RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA2YBR293W ARL1P38116 183 aaKnown RBP5.34□□□□□ -1.55
VBA2YBR293W CSN12P47130 423 aa5.34□□□□□ -1.55
VBA2YBR293W PKH3Q03306 898 aaPredicted RBP5.34□□□□□ -1.55
VBA2YBR293W CDC45Q08032 650 aa5.34□□□□□ -1.55
VBA2YBR293W GEA1P47102 1408 aaPredicted RBP5.34□□□□□ -1.55
VBA2YBR293W ESP1Q03018 1630 aa5.34□□□□□ -1.56
VBA2YBR293W IXR1P33417 597 aa5.33□□□□□ -1.56
VBA2YBR293W MSH4P40965 878 aaPredicted RBP5.33□□□□□ -1.56
VBA2YBR293W YOR1P53049 1477 aa5.33□□□□□ -1.56
VBA2YBR293W RPP0P05317 312 aaKnown RBP5.32□□□□□ -1.56
VBA2YBR293W ARG8P18544 423 aa5.32□□□□□ -1.56
VBA2YBR293W PIL1P53252 339 aaKnown RBP5.32□□□□□ -1.56
VBA2YBR293W YNL011CP53980 444 aa5.32□□□□□ -1.56
VBA2YBR293W KOG1P38873 1557 aa5.32□□□□□ -1.56
VBA2YBR293W TRM3Q07527 1436 aa5.32□□□□□ -1.56
VBA2YBR293W KNS1P32350 737 aaPredicted RBP5.31□□□□□ -1.56
VBA2YBR293W GUA1P38625 525 aaKnown RBP5.31□□□□□ -1.56
VBA2YBR293W VPS4P52917 437 aa5.31□□□□□ -1.56
VBA2YBR293W GCN2P15442 1659 aa5.31□□□□□ -1.56
VBA2YBR293W VPS27P40343 622 aaKnown RBP5.31□□□□□ -1.56
VBA2YBR293W DSN1P40568 576 aa5.31□□□□□ -1.56
VBA2YBR293W PRP3Q03338 469 aaPredicted RBP5.31□□□□□ -1.56
VBA2YBR293W UGA3P26370 528 aa5.3□□□□□ -1.56
VBA2YBR293W KTR1P27810 393 aaKnown RBP5.3□□□□□ -1.56
VBA2YBR293W MET22P32179 357 aa5.3□□□□□ -1.56
VBA2YBR293W CHZ1P40019 153 aaPredicted RBP5.3□□□□□ -1.56
VBA2YBR293W TPM2P40414 161 aa5.3□□□□□ -1.56
VBA2YBR293W LSP1Q12230 341 aaKnown RBP5.3□□□□□ -1.56
VBA2YBR293W RVB2Q12464 471 aaKnown RBP5.3□□□□□ -1.56
VBA2YBR293W SWE1P32944 819 aa5.29□□□□□ -1.56
VBA2YBR293W BYE1P36106 594 aa5.29□□□□□ -1.56
VBA2YBR293W SIC1P38634 284 aa5.29□□□□□ -1.56
VBA2YBR293W TCD1P38756 429 aa5.29□□□□□ -1.56
VBA2YBR293W YJR115WP47152 169 aa5.29□□□□□ -1.56
VBA2YBR293W KIP3P53086 805 aaKnown RBP5.29□□□□□ -1.56
VBA2YBR293W RKR1Q04781 1562 aa5.28□□□□□ -1.56
VBA2YBR293W MSH3P25336 1018 aa5.28□□□□□ -1.56
VBA2YBR293W YML020WQ03722 664 aa5.28□□□□□ -1.56
VBA2YBR293W YDR444WQ04093 687 aa5.28□□□□□ -1.56
VBA2YBR293W ESC2Q06340 456 aa5.28□□□□□ -1.56
VBA2YBR293W SRF1Q12516 437 aa5.28□□□□□ -1.56
VBA2YBR293W PDR15Q04182 1529 aaKnown RBP5.27□□□□□ -1.57
VBA2YBR293W RSC30P38781 883 aa5.27□□□□□ -1.57
VBA2YBR293W MSB3P48566 633 aaPredicted RBP5.27□□□□□ -1.57
VBA2YBR293W NNF2P53253 936 aa5.27□□□□□ -1.57
VBA2YBR293W DOS2P54858 310 aa5.27□□□□□ -1.57
VBA2YBR293W VPS60Q03390 229 aa5.27□□□□□ -1.57
VBA2YBR293W ENV9Q08651 330 aa5.27□□□□□ -1.57
VBA2YBR293W RAD2P07276 1031 aa5.26□□□□□ -1.57
VBA2YBR293W LTV1P34078 463 aa5.26□□□□□ -1.57
VBA2YBR293W MED8P38304 223 aa5.26□□□□□ -1.57
VBA2YBR293W CIN4P39110 191 aa5.26□□□□□ -1.57
VBA2YBR293W TAN1P53072 289 aaPredicted RBP5.26□□□□□ -1.57
VBA2YBR293W HPC2Q01448 625 aa5.26□□□□□ -1.57
VBA2YBR293W PDS5Q04264 1277 aa5.26□□□□□ -1.57
VBA2YBR293W NUP157P40064 1391 aaKnown RBP5.26□□□□□ -1.57
VBA2YBR293W SSA2P10592 639 aaKnown RBP5.25□□□□□ -1.57
VBA2YBR293W SRP54P20424 541 aaKnown RBP5.25□□□□□ -1.57
VBA2YBR293W CLB1P24868 471 aa5.25□□□□□ -1.57
VBA2YBR293W ECM1P39715 212 aa5.25□□□□□ -1.57
VBA2YBR293W NOP7P53261 605 aaKnown RBP5.25□□□□□ -1.57
VBA2YBR293W RNT1Q02555 471 aa5.25□□□□□ -1.57
VBA2YBR293W ETT1Q08421 412 aaKnown RBP5.25□□□□□ -1.57
VBA2YBR293W VPS15P22219 1454 aa5.25□□□□□ -1.57
VBA2YBR293W PDR5P33302 1511 aaKnown RBP5.24□□□□□ -1.57
VBA2YBR293W VAC17P25591 423 aa5.24□□□□□ -1.57
VBA2YBR293W DEP1P31385 405 aa5.24□□□□□ -1.57
VBA2YBR293W CBF5P33322 483 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
VBA2YBR293W HOS3Q02959 697 aaKnown RBP5.24□□□□□ -1.57
VBA2YBR293W LCD1Q04377 747 aa5.24□□□□□ -1.57
VBA2YBR293W BMS1Q08965 1183 aaKnown RBP5.24□□□□□ -1.57
VBA2YBR293W RAD59Q12223 238 aa5.24□□□□□ -1.57
VBA2YBR293W DNF1P32660 1571 aa5.24□□□□□ -1.57
VBA2YBR293W RAD9P14737 1309 aa5.23□□□□□ -1.57
VBA2YBR293W ORC1P54784 914 aaPredicted RBP5.23□□□□□ -1.57
VBA2YBR293W TFB3Q03290 321 aa5.23□□□□□ -1.57
VBA2YBR293W NOP8Q08287 484 aaPredicted RBP5.23□□□□□ -1.57
VBA2YBR293W NOP14Q99207 810 aaKnown RBP5.23□□□□□ -1.57
VBA2YBR293W ESC1Q03661 1658 aaKnown RBP5.23□□□□□ -1.57
VBA2YBR293W GEA2P39993 1459 aaKnown RBP5.23□□□□□ -1.57
VBA2YBR293W MRT4P33201 236 aaKnown RBP5.23□□□□□ -1.57
VBA2YBR293W PTK2P47116 818 aaKnown RBP5.23□□□□□ -1.57
VBA2YBR293W COG8Q04632 607 aa5.23□□□□□ -1.57
VBA2YBR293W LCB5Q06147 687 aaKnown RBP5.23□□□□□ -1.57
VBA2YBR293W SSA1P10591 642 aaKnown RBP5.22□□□□□ -1.57
VBA2YBR293W SWI3P32591 825 aa5.22□□□□□ -1.57
VBA2YBR293W SLX8P40072 274 aa5.22□□□□□ -1.57
VBA2YBR293W ITT1Q04638 464 aa5.22□□□□□ -1.57
VBA2YBR293W RPN7Q06103 429 aaKnown RBP5.22□□□□□ -1.57
VBA2YBR293W YLR346CQ06139 101 aa5.22□□□□□ -1.57
VBA2YBR293W GEF1P37020 779 aa5.21□□□□□ -1.58
VBA2YBR293W RSC1P53236 928 aa5.21□□□□□ -1.58
VBA2YBR293W APP1P53933 587 aa5.21□□□□□ -1.58
VBA2YBR293W TY3B-GQ99315 1547 aa5.21□□□□□ -1.58
VBA2YBR293W GDB1Q06625 1536 aa5.2□□□□□ -1.58
VBA2YBR293W ITC1P53125 1264 aa5.2□□□□□ -1.58
VBA2YBR293W GRX3Q03835 250 aa5.2□□□□□ -1.58
VBA2YBR293W ECM16Q04217 1267 aaKnown RBP5.2□□□□□ -1.58
VBA2YBR293W SUB2Q07478 446 aaKnown RBP5.2□□□□□ -1.58
VBA2YBR293W RLP24Q07915 199 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms