RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	MDG1	P53885	366 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	TIM50	Q02776	476 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	GRX3	Q03835	250 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	RTT109	Q07794	436 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	SLP1	Q12232	587 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	FRS2	P15625	503 aa	Known RBP	4.75	□□□□□ -1.65
PIM1	YBL022C	HXT13	P39924	564 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	PXR1	P53335	271 aa	Predicted RBP	4.75	□□□□□ -1.65
PIM1	YBL022C	RPO41	P13433	1351 aa	Known RBP	4.74	□□□□□ -1.65
PIM1	YBL022C	ATE1	P16639	503 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	VPS20	Q04272	221 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	CIR2	Q08822	631 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	MPH1	P40562	993 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	DNM1	P54861	757 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	DAL7	P21826	554 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	MRC1	P25588	1096 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	ESL2	P36168	1195 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	MRPL10	P36520	322 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	OLA1	P38219	394 aa	Known RBP	4.74	□□□□□ -1.65
PIM1	YBL022C	IAH1	P41734	238 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	STR2	P47164	639 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	HXT17	P53631	564 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	TLG2	Q08144	397 aa		4.74	□□□□□ -1.65
PIM1	YBL022C	CUS1	Q02554	436 aa	Predicted RBP	4.73	□□□□□ -1.65
PIM1	YBL022C	NKP2	Q06162	153 aa		4.73	□□□□□ -1.65
PIM1	YBL022C	BUD21	Q08492	214 aa	Predicted RBP	4.73	□□□□□ -1.65
PIM1	YBL022C	ABP140	Q08641	628 aa	Known RBP	4.73	□□□□□ -1.65
PIM1	YBL022C	NPR3	P38742	1146 aa		4.73	□□□□□ -1.65
PIM1	YBL022C	RME1	P32338	300 aa	Known RBP	4.72	□□□□□ -1.65
PIM1	YBL022C	TPS3	P38426	1054 aa	Known RBP	4.72	□□□□□ -1.65
PIM1	YBL022C	TPD3	P31383	635 aa		4.72	□□□□□ -1.65
PIM1	YBL022C	RGD1	P38339	666 aa		4.72	□□□□□ -1.65
PIM1	YBL022C	APC11	Q12157	165 aa		4.72	□□□□□ -1.65
PIM1	YBL022C	TRP5	P00931	707 aa	Known RBP	4.72	□□□□□ -1.65
PIM1	YBL022C	ATG9	Q12142	997 aa		4.72	□□□□□ -1.65
PIM1	YBL022C	MUD2	P36084	527 aa	Known RBP	4.71	□□□□□ -1.65
PIM1	YBL022C	UBP14	P38237	781 aa	Known RBP	4.71	□□□□□ -1.65
PIM1	YBL022C	NNF2	P53253	936 aa		4.71	□□□□□ -1.65
PIM1	YBL022C	SFH1	Q06168	426 aa		4.71	□□□□□ -1.65
PIM1	YBL022C	INP2	Q03824	705 aa		4.71	□□□□□ -1.66
PIM1	YBL022C	PUF6	Q04373	656 aa	Known RBP	4.71	□□□□□ -1.66
PIM1	YBL022C	SPE2	P21182	396 aa		4.71	□□□□□ -1.66
PIM1	YBL022C	MIC60	P36112	540 aa		4.71	□□□□□ -1.66
PIM1	YBL022C	YPL225W	Q08971	146 aa	Known RBP	4.71	□□□□□ -1.66
PIM1	YBL022C	RPC82	P32349	654 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	RCM1	P53972	490 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	ESC2	Q06340	456 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	MSB4	Q12317	492 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	DPH5	P32469	300 aa	Predicted RBP	4.7	□□□□□ -1.66
PIM1	YBL022C	VPS8	P39702	1274 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	AIM9	P40053	627 aa	Known RBP	4.7	□□□□□ -1.66
PIM1	YBL022C	VPS30	Q02948	557 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	HOT1	Q03213	719 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	PEX19	Q07418	342 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	APL5	Q08951	932 aa	Known RBP	4.7	□□□□□ -1.66
PIM1	YBL022C	FKS3	Q04952	1785 aa		4.7	□□□□□ -1.66
PIM1	YBL022C	ADE6	P38972	1358 aa	Known RBP	4.69	□□□□□ -1.66
PIM1	YBL022C	RFC5	P38251	354 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	MRX12	P47084	519 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	UBX2	Q04228	584 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	NDL1	Q06568	189 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	PUS1	Q12211	544 aa	Known RBP	4.69	□□□□□ -1.66
PIM1	YBL022C	RSF2	P46974	1380 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	SEC14	P24280	304 aa	Known RBP	4.69	□□□□□ -1.66
PIM1	YBL022C	RIO2	P40160	425 aa	Known RBP	4.69	□□□□□ -1.66
PIM1	YBL022C	YOR223W	Q12015	292 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	MCM16	Q12262	181 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	TTI1	P36097	1038 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	RFC1	P38630	861 aa	Known RBP	4.69	□□□□□ -1.66
PIM1	YBL022C	RSM25	P40496	264 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	NFI1	Q12216	726 aa		4.69	□□□□□ -1.66
PIM1	YBL022C	DDP1	Q99321	188 aa	Known RBP	4.69	□□□□□ -1.66
PIM1	YBL022C	TAF13	P11747	167 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	APL6	P46682	809 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	DID4	P36108	232 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	YJR142W	P47173	342 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	PSY4	P38193	441 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	SIT1	P39980	628 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	VID30	P53076	958 aa		4.68	□□□□□ -1.66
PIM1	YBL022C	CLN1	P20437	546 aa		4.67	□□□□□ -1.66
PIM1	YBL022C	PRP31	P49704	494 aa	Predicted RBP	4.67	□□□□□ -1.66
PIM1	YBL022C	NCS2	P53923	493 aa	Predicted RBP	4.67	□□□□□ -1.66
PIM1	YBL022C	YDR338C	Q05497	695 aa		4.67	□□□□□ -1.66
PIM1	YBL022C	SPB4	P25808	606 aa	Predicted RBP	4.67	□□□□□ -1.66
PIM1	YBL022C	PUP2	P32379	260 aa		4.67	□□□□□ -1.66
PIM1	YBL022C	CTH1	P47976	325 aa		4.67	□□□□□ -1.66
PIM1	YBL022C	YVC1	Q12324	675 aa		4.67	□□□□□ -1.66
PIM1	YBL022C	PRP16	P15938	1071 aa	Predicted RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	RTR1	P40084	226 aa	Predicted RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	CKB1	P43639	278 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	DPL1	Q05567	589 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	YLR177W	Q06251	628 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	TSR3	Q12094	313 aa	Known RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	TFC8	Q12308	588 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	RMP1	Q12530	201 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	TFG1	P41895	735 aa	Predicted RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	MAL13	P53338	473 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	DOS2	P54858	310 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	ECM23	Q02710	187 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	SUP35	P05453	685 aa	Known RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms