RNA–Protein interactions for RNA: ENST00000554814.1

AL355838.1-201, humanhuman

TSL 4 BASIC

Gene AL355838.1, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355838.1-201ENST00000554814 IFT140Q96RY7 1462 aa12□□□□□ -0.49
AL355838.1-201ENST00000554814 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
AL355838.1-201ENST00000554814 ANKK1Q8NFD2 765 aa11.99□□□□□ -0.49
AL355838.1-201ENST00000554814 CERKQ8TCT0 537 aa11.99□□□□□ -0.49
AL355838.1-201ENST00000554814 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
AL355838.1-201ENST00000554814 CHD1O14646 1710 aa11.98□□□□□ -0.49
AL355838.1-201ENST00000554814 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
AL355838.1-201ENST00000554814 EIF4G3O43432 1585 aaKnown RBP11.98□□□□□ -0.49
AL355838.1-201ENST00000554814 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
AL355838.1-201ENST00000554814 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
AL355838.1-201ENST00000554814 PADI6Q6TGC4 694 aa11.96□□□□□ -0.49
AL355838.1-201ENST00000554814 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
AL355838.1-201ENST00000554814 TATDN2Q93075 761 aa11.95□□□□□ -0.5
AL355838.1-201ENST00000554814 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
AL355838.1-201ENST00000554814 PTGDRQ13258 359 aa11.93□□□□□ -0.5
AL355838.1-201ENST00000554814 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
AL355838.1-201ENST00000554814 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
AL355838.1-201ENST00000554814 NUDT18Q6ZVK8 323 aa11.92□□□□□ -0.5
AL355838.1-201ENST00000554814 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
AL355838.1-201ENST00000554814 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
AL355838.1-201ENST00000554814 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
AL355838.1-201ENST00000554814 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
AL355838.1-201ENST00000554814 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
AL355838.1-201ENST00000554814 SAMD7Q7Z3H4 446 aa11.89□□□□□ -0.51
AL355838.1-201ENST00000554814 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
AL355838.1-201ENST00000554814 SOGA1O94964 1423 aa11.87□□□□□ -0.51
AL355838.1-201ENST00000554814 LRCH3Q96II8 777 aa11.87□□□□□ -0.51
AL355838.1-201ENST00000554814 EYA1Q99502 592 aa11.87□□□□□ -0.51
AL355838.1-201ENST00000554814 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
AL355838.1-201ENST00000554814 RBM26Q5T8P6 1007 aaKnown RBP11.86□□□□□ -0.51
AL355838.1-201ENST00000554814 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
AL355838.1-201ENST00000554814 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
AL355838.1-201ENST00000554814 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
AL355838.1-201ENST00000554814 GPR37O15354 613 aa11.85□□□□□ -0.51
AL355838.1-201ENST00000554814 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
AL355838.1-201ENST00000554814 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
AL355838.1-201ENST00000554814 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
AL355838.1-201ENST00000554814 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
AL355838.1-201ENST00000554814 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
AL355838.1-201ENST00000554814 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
AL355838.1-201ENST00000554814 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
AL355838.1-201ENST00000554814 ADGRG1Q9Y653 693 aa11.82□□□□□ -0.52
AL355838.1-201ENST00000554814 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
AL355838.1-201ENST00000554814 CUX1P39880 1505 aa11.8□□□□□ -0.52
AL355838.1-201ENST00000554814 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
AL355838.1-201ENST00000554814 FCHSD2O94868 740 aa11.78□□□□□ -0.52
AL355838.1-201ENST00000554814 FECHP22830 423 aa11.78□□□□□ -0.52
AL355838.1-201ENST00000554814 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
AL355838.1-201ENST00000554814 A0A0G2JS52 829 aa11.76□□□□□ -0.53
AL355838.1-201ENST00000554814 PPP4CP60510 307 aa11.75□□□□□ -0.53
AL355838.1-201ENST00000554814 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
AL355838.1-201ENST00000554814 APLP1P51693 650 aa11.74□□□□□ -0.53
AL355838.1-201ENST00000554814 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
AL355838.1-201ENST00000554814 HIC1Q14526 733 aa11.72□□□□□ -0.53
AL355838.1-201ENST00000554814 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
AL355838.1-201ENST00000554814 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
AL355838.1-201ENST00000554814 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
AL355838.1-201ENST00000554814 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
AL355838.1-201ENST00000554814 RNF40O75150 1001 aa11.7□□□□□ -0.54
AL355838.1-201ENST00000554814 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 DNAJB2P25686 324 aa11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 RBM46Q8TBY0 533 aaKnown RBP11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
AL355838.1-201ENST00000554814 GNPATO15228 680 aa11.68□□□□□ -0.54
AL355838.1-201ENST00000554814 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
AL355838.1-201ENST00000554814 KCNC4Q03721 635 aa11.67□□□□□ -0.54
AL355838.1-201ENST00000554814 MTRQ99707 1265 aa11.67□□□□□ -0.54
AL355838.1-201ENST00000554814 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
AL355838.1-201ENST00000554814 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
AL355838.1-201ENST00000554814 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
AL355838.1-201ENST00000554814 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
AL355838.1-201ENST00000554814 ZNF516Q92618 1163 aa11.65□□□□□ -0.54
AL355838.1-201ENST00000554814 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
AL355838.1-201ENST00000554814 SLC10A3P09131 477 aa11.63□□□□□ -0.55
AL355838.1-201ENST00000554814 HDGFP51858 240 aaKnown RBP11.63□□□□□ -0.55
AL355838.1-201ENST00000554814 GPIHBP1Q8IV16 184 aa11.63□□□□□ -0.55
AL355838.1-201ENST00000554814 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
AL355838.1-201ENST00000554814 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
AL355838.1-201ENST00000554814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
AL355838.1-201ENST00000554814 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
AL355838.1-201ENST00000554814 OATP04181 439 aa11.6□□□□□ -0.55
AL355838.1-201ENST00000554814 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
AL355838.1-201ENST00000554814 NKX2-3Q8TAU0 364 aa11.59□□□□□ -0.55
AL355838.1-201ENST00000554814 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
AL355838.1-201ENST00000554814 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
AL355838.1-201ENST00000554814 GRIN2AQ12879 1464 aa11.57□□□□□ -0.56
AL355838.1-201ENST00000554814 RGS20O76081 388 aa11.57□□□□□ -0.56
AL355838.1-201ENST00000554814 COPS2P61201 443 aa11.57□□□□□ -0.56
AL355838.1-201ENST00000554814 CFHP08603 1231 aa11.54□□□□□ -0.56
AL355838.1-201ENST00000554814 BLOC1S3Q6QNY0 202 aa11.54□□□□□ -0.56
AL355838.1-201ENST00000554814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.53□□□□□ -0.56
AL355838.1-201ENST00000554814 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
AL355838.1-201ENST00000554814 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
AL355838.1-201ENST00000554814 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.56
AL355838.1-201ENST00000554814 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.56
AL355838.1-201ENST00000554814 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
AL355838.1-201ENST00000554814 FAM69CQ0P6D2 419 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms