RNA–Protein interactions for RNA: ENST00000554814.1

AL355838.1-201, humanhuman

TSL 4 BASIC

Gene AL355838.1, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355838.1-201ENST00000554814 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
AL355838.1-201ENST00000554814 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
AL355838.1-201ENST00000554814 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
AL355838.1-201ENST00000554814 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
AL355838.1-201ENST00000554814 FOXD1Q16676 465 aa23.34■■□□□ 1.33
AL355838.1-201ENST00000554814 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
AL355838.1-201ENST00000554814 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
AL355838.1-201ENST00000554814 ADRA2BP18089 450 aa22.07■■□□□ 1.12
AL355838.1-201ENST00000554814 PIAS4Q8N2W9 510 aaPredicted RBP21.8■■□□□ 1.08
AL355838.1-201ENST00000554814 MSH5O43196 834 aa21.55■■□□□ 1.04
AL355838.1-201ENST00000554814 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
AL355838.1-201ENST00000554814 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
AL355838.1-201ENST00000554814 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
AL355838.1-201ENST00000554814 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
AL355838.1-201ENST00000554814 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
AL355838.1-201ENST00000554814 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
AL355838.1-201ENST00000554814 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
AL355838.1-201ENST00000554814 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
AL355838.1-201ENST00000554814 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
AL355838.1-201ENST00000554814 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
AL355838.1-201ENST00000554814 KCNA4P22459 653 aa19.06■□□□□ 0.64
AL355838.1-201ENST00000554814 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
AL355838.1-201ENST00000554814 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
AL355838.1-201ENST00000554814 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
AL355838.1-201ENST00000554814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
AL355838.1-201ENST00000554814 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
AL355838.1-201ENST00000554814 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
AL355838.1-201ENST00000554814 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
AL355838.1-201ENST00000554814 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
AL355838.1-201ENST00000554814 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
AL355838.1-201ENST00000554814 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
AL355838.1-201ENST00000554814 ZBTB22O15209 634 aa17.64■□□□□ 0.41
AL355838.1-201ENST00000554814 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
AL355838.1-201ENST00000554814 CAPN15O75808 1086 aa17.56■□□□□ 0.4
AL355838.1-201ENST00000554814 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
AL355838.1-201ENST00000554814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
AL355838.1-201ENST00000554814 DSG3P32926 999 aa17.48■□□□□ 0.39
AL355838.1-201ENST00000554814 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
AL355838.1-201ENST00000554814 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
AL355838.1-201ENST00000554814 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
AL355838.1-201ENST00000554814 APLP2Q06481 763 aa17.35■□□□□ 0.37
AL355838.1-201ENST00000554814 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
AL355838.1-201ENST00000554814 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
AL355838.1-201ENST00000554814 ABCB7O75027 752 aa17.27■□□□□ 0.36
AL355838.1-201ENST00000554814 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
AL355838.1-201ENST00000554814 POLA2Q14181 598 aa17.02■□□□□ 0.32
AL355838.1-201ENST00000554814 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
AL355838.1-201ENST00000554814 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
AL355838.1-201ENST00000554814 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
AL355838.1-201ENST00000554814 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
AL355838.1-201ENST00000554814 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
AL355838.1-201ENST00000554814 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
AL355838.1-201ENST00000554814 FBLN2P98095 1184 aa16.34■□□□□ 0.21
AL355838.1-201ENST00000554814 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
AL355838.1-201ENST00000554814 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
AL355838.1-201ENST00000554814 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
AL355838.1-201ENST00000554814 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
AL355838.1-201ENST00000554814 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
AL355838.1-201ENST00000554814 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
AL355838.1-201ENST00000554814 POTEHQ6S545 545 aa16.14■□□□□ 0.17
AL355838.1-201ENST00000554814 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
AL355838.1-201ENST00000554814 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
AL355838.1-201ENST00000554814 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
AL355838.1-201ENST00000554814 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
AL355838.1-201ENST00000554814 PIP4P2Q8N4L2 257 aa15.86■□□□□ 0.13
AL355838.1-201ENST00000554814 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
AL355838.1-201ENST00000554814 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
AL355838.1-201ENST00000554814 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
AL355838.1-201ENST00000554814 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
AL355838.1-201ENST00000554814 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
AL355838.1-201ENST00000554814 PROM2Q8N271 834 aa15.56■□□□□ 0.08
AL355838.1-201ENST00000554814 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
AL355838.1-201ENST00000554814 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
AL355838.1-201ENST00000554814 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
AL355838.1-201ENST00000554814 EVX2Q03828 476 aa15.41■□□□□ 0.06
AL355838.1-201ENST00000554814 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
AL355838.1-201ENST00000554814 FKBP8Q14318 412 aa15.36■□□□□ 0.05
AL355838.1-201ENST00000554814 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
AL355838.1-201ENST00000554814 HAX1O00165 279 aa15.35■□□□□ 0.05
AL355838.1-201ENST00000554814 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
AL355838.1-201ENST00000554814 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
AL355838.1-201ENST00000554814 FARP1Q9Y4F1 1045 aaPredicted RBP15.28■□□□□ 0.04
AL355838.1-201ENST00000554814 MNX1P50219 401 aaPredicted RBP15.2■□□□□ 0.02
AL355838.1-201ENST00000554814 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
AL355838.1-201ENST00000554814 GABBR2O75899 941 aa14.97□□□□□ -0.01
AL355838.1-201ENST00000554814 ABCC9O60706 1549 aa14.95□□□□□ -0.02
AL355838.1-201ENST00000554814 MIER1Q8N108 512 aa14.94□□□□□ -0.02
AL355838.1-201ENST00000554814 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
AL355838.1-201ENST00000554814 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
AL355838.1-201ENST00000554814 ZNF579Q8NAF0 562 aaKnown RBP14.89□□□□□ -0.03
AL355838.1-201ENST00000554814 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
AL355838.1-201ENST00000554814 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
AL355838.1-201ENST00000554814 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
AL355838.1-201ENST00000554814 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
AL355838.1-201ENST00000554814 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
AL355838.1-201ENST00000554814 VASPP50552 380 aaPredicted RBP14.75□□□□□ -0.05
AL355838.1-201ENST00000554814 NUBP1P53384 320 aa14.75□□□□□ -0.05
AL355838.1-201ENST00000554814 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
AL355838.1-201ENST00000554814 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
AL355838.1-201ENST00000554814 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms