RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Bcl11bQ99PV8 884 aa11.41□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Map3k1P53349 1493 aa11.4□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Dnai2A2AC93 623 aa11.4□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Map7d2A2AG50 781 aa11.4□□□□□ -0.58
Scn8a-213ENSMUST00000201549 Nol10Q5RJG1 687 aaKnown RBP11.4□□□□□ -0.58
Scn8a-213ENSMUST00000201549 BicraF8VPZ9 1578 aa11.39□□□□□ -0.59
Scn8a-213ENSMUST00000201549 AppP12023 770 aa11.39□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Fbln2P37889 1221 aa11.39□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Ttll5Q8CHB8 1328 aa11.39□□□□□ -0.59
Scn8a-213ENSMUST00000201549 CenpjQ569L8 1344 aa11.39□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Rsph3aQ3UFY4 516 aa11.38□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Drc7Q6V3W6 876 aa11.38□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Psme1P97371 249 aa11.38□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Ftsj3Q9DBE9 838 aaKnown RBP11.38□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Trim58Q5NCC9 485 aa11.38□□□□□ -0.59
Scn8a-213ENSMUST00000201549 A0A0U1RNP2 1173 aa11.37□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Rsph6aQ8CDR2 708 aa11.37□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Ralbp1Q62172 648 aa11.37□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Slx4Q6P1D7 1565 aa11.37□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Nutm1Q8BHP2 1126 aa11.37□□□□□ -0.59
Scn8a-213ENSMUST00000201549 G3bp1P97855 465 aaKnown RBP11.37□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Zfp777B9EKF4 885 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Ccdc183A2AJB1 534 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 CalrP14211 416 aaKnown RBP11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 L3mbtl2P59178 703 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Gm7298A0A0N4SVU1 1476 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Ncoa2Q61026 1462 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Stard8Q8K031 1019 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Cc2d1aQ8K1A6 943 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Nectin2P32507 530 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Kiaa0754Q69ZZ9 979 aa11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 AqrQ8CFQ3 1481 aaKnown RBP11.36□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Adam1bQ8R534 806 aa11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Chmp4cQ9D7F7 232 aa11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 PtmsQ9D0J8 101 aaKnown RBP11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Hs1bp3Q3TC93 395 aa11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Mink1Q9JM52 1308 aa11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Utp14aQ640M1 767 aaKnown RBP11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Ppp2r1aQ76MZ3 589 aa11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Plekhh1Q80TI1 1356 aa11.35□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Camsap1A2AHC3 1581 aa11.34□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Rabep1O35551 862 aa11.34□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Iffo2Q8R2V2 512 aa11.34□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Txndc2Q6P902 515 aa11.34□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Chmp3Q9CQ10 224 aa11.34□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Naip2Q9QUK4 1447 aa11.34□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Klf15Q9EPW2 415 aa11.33□□□□□ -0.59
Scn8a-213ENSMUST00000201549 Brpf1B2RRD7 1212 aa11.33□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Frmpd1A2AKB4 1549 aa11.32□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Kcnn1Q9EQR3 537 aa11.32□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Casq1O09165 405 aa11.32□□□□□ -0.6
Scn8a-213ENSMUST00000201549 MecomP14404 1042 aa11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 A2mQ6GQT1 1474 aa11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Shq1Q7TMX5 569 aa11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Ddrgk1Q80WW9 315 aa11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Myom3A2ABU4 1439 aa11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Plekhg5Q66T02 1073 aa11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Tnpo1Q8BFY9 898 aaKnown RBP11.31□□□□□ -0.6
Scn8a-213ENSMUST00000201549 NexmifQ5DTT1 1515 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Jph4Q80WT0 628 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Gtf3c5Q8R2T8 520 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Ankrd26Q811D2 1581 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Cd109Q8R422 1442 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Ipo4Q8VI75 1082 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 VgfQ0VGU4 617 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 R3hcc1Q8BSI6 488 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 ErbinQ80TH2 1402 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Kri1Q8VDQ9 704 aaKnown RBP11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Arhgap5P97393 1501 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 FosbP13346 338 aa11.3□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Triml2E9PW10 424 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Stk11ipQ3TAA7 1072 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Pde4cQ3UEI1 686 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Apaf1O88879 1249 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Slc4a10Q5DTL9 1118 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Arhgap31A6X8Z5 1425 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Becn1O88597 448 aa11.29□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Rab3gap2Q8BMG7 1366 aa11.28□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Smarce1O54941 411 aaKnown RBP11.28□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Ppp2r3aB2RXC8 1150 aa11.28□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Stk31Q99MW1 1018 aa11.28□□□□□ -0.6
Scn8a-213ENSMUST00000201549 Rbm25B2RY56 838 aaKnown RBP11.27□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Vgll3P85442 326 aa11.27□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Sf3b2Q3UJB0 878 aaKnown RBP11.27□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Kiaa1211Q5PR69 1207 aa11.27□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Cgnl1Q6AW69 1298 aa11.27□□□□□ -0.61
Scn8a-213ENSMUST00000201549 PogzQ8BZH4 1409 aaKnown RBP11.27□□□□□ -0.61
Scn8a-213ENSMUST00000201549 EprsQ8CGC7 1512 aaKnown RBP11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Map3k5O35099 1380 aa11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Urb2E9Q7L1 1524 aaKnown RBP11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Usp16Q99LG0 825 aa11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Erich4Q3UNU4 136 aa11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Filip1lQ6P6L0 1131 aa11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Ush1cQ9ES64 910 aa11.26□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Tspyl2Q7TQI8 677 aa11.25□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Phactr2B1AVP0 632 aa11.25□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Rsph4aQ8BYM7 716 aa11.25□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Cald1E9QA15 768 aaKnown RBP11.25□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Atl3Q91YH5 541 aa11.25□□□□□ -0.61
Scn8a-213ENSMUST00000201549 Nek4Q9Z1J2 792 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms