RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C YLR422WQ06409 1932 aa1.54□□□□□ -2.16
SHE4YOR035C YGR026WP53217 278 aa1.54□□□□□ -2.16
SHE4YOR035C YNL134CP53912 376 aaKnown RBP1.54□□□□□ -2.16
SHE4YOR035C YMR279CQ03263 540 aa1.54□□□□□ -2.16
SHE4YOR035C FAR8Q05040 523 aa1.54□□□□□ -2.16
SHE4YOR035C CSM4Q08955 156 aa1.54□□□□□ -2.16
SHE4YOR035C DUR1,2P32528 1835 aaKnown RBP1.54□□□□□ -2.16
SHE4YOR035C SNA3P14359 133 aa1.54□□□□□ -2.16
SHE4YOR035C YCL042WP25572 119 aa1.54□□□□□ -2.16
SHE4YOR035C YHR127WP38833 243 aaKnown RBP1.54□□□□□ -2.16
SHE4YOR035C TVP23P38962 199 aa1.54□□□□□ -2.16
SHE4YOR035C SMD3P43321 101 aaKnown RBP1.54□□□□□ -2.16
SHE4YOR035C YGL159WP53110 370 aa1.54□□□□□ -2.16
SHE4YOR035C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SHE4YOR035C YLR030WQ07967 263 aa1.54□□□□□ -2.16
SHE4YOR035C RPT5P33297 434 aaKnown RBP1.53□□□□□ -2.16
SHE4YOR035C INM2Q05533 292 aa1.53□□□□□ -2.16
SHE4YOR035C AKR2Q12013 749 aa1.53□□□□□ -2.16
SHE4YOR035C ADH3P07246 375 aaKnown RBP1.52□□□□□ -2.17
SHE4YOR035C TCP1P12612 559 aaKnown RBP1.52□□□□□ -2.17
SHE4YOR035C JHD2P47156 728 aaPredicted RBP1.52□□□□□ -2.17
SHE4YOR035C MRPL50P53724 139 aa1.52□□□□□ -2.17
SHE4YOR035C YLR173WQ06247 608 aa1.52□□□□□ -2.17
SHE4YOR035C YPL257WQ08974 193 aa1.52□□□□□ -2.17
SHE4YOR035C IPP1P00817 287 aaKnown RBP1.52□□□□□ -2.17
SHE4YOR035C GTR2P53290 341 aa1.52□□□□□ -2.17
SHE4YOR035C VMA11P32842 164 aa1.51□□□□□ -2.17
SHE4YOR035C FIS1P40515 155 aa1.51□□□□□ -2.17
SHE4YOR035C YFR054CP43622 192 aa1.51□□□□□ -2.17
SHE4YOR035C RMR1P53060 241 aa1.51□□□□□ -2.17
SHE4YOR035C YNL046WP53956 172 aa1.51□□□□□ -2.17
SHE4YOR035C DAD3P69850 94 aa1.51□□□□□ -2.17
SHE4YOR035C YPR172WQ06608 200 aa1.51□□□□□ -2.17
SHE4YOR035C ATO3Q12359 275 aa1.51□□□□□ -2.17
SHE4YOR035C COX5AP00424 153 aa1.51□□□□□ -2.17
SHE4YOR035C DSF1P0CX08 502 aa1.51□□□□□ -2.17
SHE4YOR035C YNR073CP0CX09 502 aa1.51□□□□□ -2.17
SHE4YOR035C YJR079WP47126 109 aa1.51□□□□□ -2.17
SHE4YOR035C PAM18Q07914 168 aa1.51□□□□□ -2.17
SHE4YOR035C MED4Q12343 284 aa1.51□□□□□ -2.17
SHE4YOR035C LSM4P40070 187 aaKnown RBP1.5□□□□□ -2.17
SHE4YOR035C YMR144WP40214 342 aaKnown RBP1.5□□□□□ -2.17
SHE4YOR035C YLR126CQ12288 251 aa1.5□□□□□ -2.17
SHE4YOR035C HTL1Q9URQ5 78 aa1.5□□□□□ -2.17
SHE4YOR035C IKI3Q06706 1349 aaKnown RBP1.5□□□□□ -2.17
SHE4YOR035C PEX4P29340 183 aa1.5□□□□□ -2.17
SHE4YOR035C YAR068WP39564 161 aa1.5□□□□□ -2.17
SHE4YOR035C SEI1Q06058 285 aa1.5□□□□□ -2.17
SHE4YOR035C BOL1Q3E793 110 aa1.5□□□□□ -2.17
SHE4YOR035C RIF1P29539 1916 aa1.5□□□□□ -2.17
SHE4YOR035C FBA1P14540 359 aaKnown RBP1.49□□□□□ -2.17
SHE4YOR035C YPT52P36018 234 aaKnown RBP1.49□□□□□ -2.17
SHE4YOR035C CIS3P47001 227 aa1.49□□□□□ -2.17
SHE4YOR035C HOC1P47124 396 aa1.49□□□□□ -2.17
SHE4YOR035C ATG39Q06159 398 aa1.49□□□□□ -2.17
SHE4YOR035C ATG31Q12421 196 aa1.49□□□□□ -2.17
SHE4YOR035C RPL9AP05738 191 aaKnown RBP1.49□□□□□ -2.17
SHE4YOR035C CTR2P38865 189 aa1.49□□□□□ -2.17
SHE4YOR035C RPL9BP51401 191 aaKnown RBP1.49□□□□□ -2.17
SHE4YOR035C SCL1P21243 252 aaKnown RBP1.48□□□□□ -2.17
SHE4YOR035C MDH3P32419 343 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SHE4YOR035C AYR1P40471 297 aa1.48□□□□□ -2.17
SHE4YOR035C YFH7P43591 353 aa1.48□□□□□ -2.17
SHE4YOR035C YGR219WP53307 113 aa1.48□□□□□ -2.17
SHE4YOR035C RRN5Q02983 363 aa1.48□□□□□ -2.17
SHE4YOR035C MRPS8Q03799 155 aa1.48□□□□□ -2.17
SHE4YOR035C YIL046W-AQ3E7Z4 54 aa1.48□□□□□ -2.17
SHE4YOR035C RAS2P01120 322 aaKnown RBP1.48□□□□□ -2.17
SHE4YOR035C YKL075CP36083 450 aa1.48□□□□□ -2.17
SHE4YOR035C DOG1P38774 246 aa1.48□□□□□ -2.17
SHE4YOR035C HAM1P47119 197 aaKnown RBP1.48□□□□□ -2.17
SHE4YOR035C ILM1P47155 203 aa1.48□□□□□ -2.17
SHE4YOR035C KRE28Q04431 385 aa1.48□□□□□ -2.17
SHE4YOR035C MSA1Q08471 629 aa1.48□□□□□ -2.17
SHE4YOR035C YRA1Q12159 226 aaKnown RBP1.48□□□□□ -2.17
SHE4YOR035C MLP1Q02455 1875 aaKnown RBP1.47□□□□□ -2.17
SHE4YOR035C SAC3P46674 1301 aa1.47□□□□□ -2.17
SHE4YOR035C MSW1P04803 379 aa1.47□□□□□ -2.17
SHE4YOR035C MRPL25P23369 157 aa1.47□□□□□ -2.17
SHE4YOR035C RPS5P26783 225 aaKnown RBP1.47□□□□□ -2.17
SHE4YOR035C FMC1P40491 155 aa1.47□□□□□ -2.17
SHE4YOR035C CAT5P41735 233 aa1.47□□□□□ -2.17
SHE4YOR035C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
SHE4YOR035C NIP7Q08962 181 aaKnown RBP1.47□□□□□ -2.17
SHE4YOR035C YOR020W-AQ3E824 90 aa1.47□□□□□ -2.17
SHE4YOR035C FCY2P17064 533 aa1.47□□□□□ -2.17
SHE4YOR035C ERD2P18414 219 aa1.47□□□□□ -2.17
SHE4YOR035C YIL001WP40560 513 aa1.47□□□□□ -2.17
SHE4YOR035C YJR056CP47115 236 aa1.47□□□□□ -2.17
SHE4YOR035C ERG25P53045 309 aa1.47□□□□□ -2.17
SHE4YOR035C YMR321CQ04898 105 aa1.47□□□□□ -2.17
SHE4YOR035C RIB1P38066 345 aa1.46□□□□□ -2.18
SHE4YOR035C LDB7P38210 180 aa1.46□□□□□ -2.18
SHE4YOR035C NEJ1Q06148 342 aa1.46□□□□□ -2.18
SHE4YOR035C PHO88P38264 188 aaPredicted RBP1.45□□□□□ -2.18
SHE4YOR035C CUE1P38428 203 aa1.45□□□□□ -2.18
SHE4YOR035C PEP8P40335 379 aa1.45□□□□□ -2.18
SHE4YOR035C CYT2Q00873 224 aa1.45□□□□□ -2.18
SHE4YOR035C PET117Q02771 107 aa1.45□□□□□ -2.18
SHE4YOR035C SSQ1Q05931 657 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 94.5 ms