RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C YCR016WP25617 290 aaKnown RBP1.46□□□□□ -2.18
SMD3YLR147C YET1P35723 206 aa1.46□□□□□ -2.18
SMD3YLR147C UMP1P38293 148 aa1.46□□□□□ -2.18
SMD3YLR147C TCD1P38756 429 aa1.46□□□□□ -2.18
SMD3YLR147C LIA1P47120 325 aaKnown RBP1.46□□□□□ -2.18
SMD3YLR147C SWP1Q02795 286 aa1.46□□□□□ -2.18
SMD3YLR147C SNZ1Q03148 297 aa1.46□□□□□ -2.18
SMD3YLR147C ANT1Q06497 328 aa1.46□□□□□ -2.18
SMD3YLR147C DRS2P39524 1355 aa1.46□□□□□ -2.18
SMD3YLR147C MRPL17P36528 281 aa1.45□□□□□ -2.18
SMD3YLR147C NOP13P53883 403 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SMD3YLR147C BUD4P47136 1447 aa1.45□□□□□ -2.18
SMD3YLR147C CFT1Q06632 1357 aaKnown RBP1.45□□□□□ -2.18
SMD3YLR147C BPT1P14772 1559 aa1.44□□□□□ -2.18
SMD3YLR147C CDC28P00546 298 aaKnown RBP1.44□□□□□ -2.18
SMD3YLR147C CPA1P07258 411 aaKnown RBP1.44□□□□□ -2.18
SMD3YLR147C MRPL28P36527 147 aa1.44□□□□□ -2.18
SMD3YLR147C MPA43P53583 542 aaPredicted RBP1.44□□□□□ -2.18
SMD3YLR147C POP3P53833 195 aaPredicted RBP1.44□□□□□ -2.18
SMD3YLR147C TDA8Q6B2U8 126 aa1.44□□□□□ -2.18
SMD3YLR147C BNI1P41832 1953 aa1.44□□□□□ -2.18
SMD3YLR147C GEA2P39993 1459 aaKnown RBP1.43□□□□□ -2.18
SMD3YLR147C SEC17P32602 292 aa1.43□□□□□ -2.18
SMD3YLR147C PRE6P40303 254 aaKnown RBP1.43□□□□□ -2.18
SMD3YLR147C MIC26P50087 233 aa1.43□□□□□ -2.18
SMD3YLR147C FYV6P53913 173 aa1.43□□□□□ -2.18
SMD3YLR147C YDR248CQ03786 193 aa1.43□□□□□ -2.18
SMD3YLR147C MET5P47169 1442 aa1.42□□□□□ -2.18
SMD3YLR147C TIM9O74700 87 aa1.42□□□□□ -2.18
SMD3YLR147C MSN4P33749 630 aa1.42□□□□□ -2.18
SMD3YLR147C YER076CP40049 302 aa1.42□□□□□ -2.18
SMD3YLR147C PRM8P53174 237 aa1.42□□□□□ -2.18
SMD3YLR147C GAS3Q03655 524 aa1.42□□□□□ -2.18
SMD3YLR147C CDC123Q05791 360 aa1.42□□□□□ -2.18
SMD3YLR147C FSF1Q12029 327 aaKnown RBP1.42□□□□□ -2.18
SMD3YLR147C MCP1Q12106 302 aa1.42□□□□□ -2.18
SMD3YLR147C MYO2P19524 1574 aaKnown RBP1.42□□□□□ -2.18
SMD3YLR147C IRC20Q06554 1556 aa1.42□□□□□ -2.18
SMD3YLR147C TCB3Q03640 1545 aaKnown RBP1.41□□□□□ -2.18
SMD3YLR147C DBF2P22204 572 aa1.41□□□□□ -2.18
SMD3YLR147C TCA17P32613 152 aa1.41□□□□□ -2.18
SMD3YLR147C FAR7P43592 221 aa1.41□□□□□ -2.18
SMD3YLR147C BRR6P53062 197 aa1.41□□□□□ -2.18
SMD3YLR147C ALG13P53178 202 aa1.41□□□□□ -2.18
SMD3YLR147C SAY1P53324 424 aa1.41□□□□□ -2.18
SMD3YLR147C UBC7Q02159 165 aa1.41□□□□□ -2.18
SMD3YLR147C YPL162CQ12042 273 aa1.41□□□□□ -2.18
SMD3YLR147C TSC3Q3E790 80 aa1.41□□□□□ -2.18
SMD3YLR147C RPO31P04051 1460 aa1.41□□□□□ -2.18
SMD3YLR147C CDC25P04821 1589 aa1.41□□□□□ -2.18
SMD3YLR147C HSL1P34244 1518 aa1.4□□□□□ -2.18
SMD3YLR147C YCF1P39109 1515 aaKnown RBP1.4□□□□□ -2.18
SMD3YLR147C NUM1Q00402 2748 aa1.4□□□□□ -2.18
SMD3YLR147C PEP1P32319 1579 aa1.4□□□□□ -2.19
SMD3YLR147C SNC2P33328 115 aa1.4□□□□□ -2.19
SMD3YLR147C UTP30P36144 274 aaKnown RBP1.4□□□□□ -2.19
SMD3YLR147C ERJ5P43613 295 aaPredicted RBP1.4□□□□□ -2.19
SMD3YLR147C TUS1Q06412 1307 aa1.4□□□□□ -2.19
SMD3YLR147C VAR1P02381 398 aa1.39□□□□□ -2.19
SMD3YLR147C RHO1P06780 209 aaKnown RBP1.39□□□□□ -2.19
SMD3YLR147C TFC1P32367 649 aa1.39□□□□□ -2.19
SMD3YLR147C YER085CP40058 173 aa1.39□□□□□ -2.19
SMD3YLR147C GVP36P40531 326 aaKnown RBP1.39□□□□□ -2.19
SMD3YLR147C NUP57P48837 541 aa1.39□□□□□ -2.19
SMD3YLR147C KNH1P50112 268 aa1.39□□□□□ -2.19
SMD3YLR147C CUS2P53830 285 aaPredicted RBP1.39□□□□□ -2.19
SMD3YLR147C GPM2Q12008 311 aa1.39□□□□□ -2.19
SMD3YLR147C RPA190P10964 1664 aaKnown RBP1.39□□□□□ -2.19
SMD3YLR147C TY1B-DR4Q07793 1604 aa1.38□□□□□ -2.19
SMD3YLR147C YOR093CQ12275 1648 aa1.38□□□□□ -2.19
SMD3YLR147C SSO1P32867 290 aa1.38□□□□□ -2.19
SMD3YLR147C APS1P35181 156 aa1.38□□□□□ -2.19
SMD3YLR147C YBR209WP38311 105 aa1.38□□□□□ -2.19
SMD3YLR147C SIP3P38717 1229 aa1.38□□□□□ -2.19
SMD3YLR147C COX15P40086 486 aa1.38□□□□□ -2.19
SMD3YLR147C EAF6P47128 113 aa1.38□□□□□ -2.19
SMD3YLR147C BXI1P48558 297 aa1.38□□□□□ -2.19
SMD3YLR147C MSB2P32334 1306 aa1.38□□□□□ -2.19
SMD3YLR147C HIR3P47171 1648 aa1.37□□□□□ -2.19
SMD3YLR147C SIN3P22579 1536 aa1.37□□□□□ -2.19
SMD3YLR147C THP2O13539 261 aaKnown RBP1.37□□□□□ -2.19
SMD3YLR147C YMR31P19955 123 aa1.37□□□□□ -2.19
SMD3YLR147C MIC12P38341 106 aa1.37□□□□□ -2.19
SMD3YLR147C ATG40Q99325 256 aa1.37□□□□□ -2.19
SMD3YLR147C IDH1P28834 360 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
SMD3YLR147C VMA6P32366 345 aaKnown RBP1.36□□□□□ -2.19
SMD3YLR147C SPT6P23615 1451 aaKnown RBP1.36□□□□□ -2.19
SMD3YLR147C THO2P53552 1597 aaKnown RBP1.35□□□□□ -2.19
SMD3YLR147C AQY2P0CD90 149 aa1.35□□□□□ -2.19
SMD3YLR147C SHE2P36068 246 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
SMD3YLR147C TVP38P36164 337 aa1.35□□□□□ -2.19
SMD3YLR147C SKG1P36169 355 aa1.35□□□□□ -2.19
SMD3YLR147C YGR050CP53231 118 aa1.35□□□□□ -2.19
SMD3YLR147C YDL180WQ12301 547 aa1.35□□□□□ -2.19
SMD3YLR147C YNL146C-AQ3E7Z1 64 aa1.35□□□□□ -2.19
SMD3YLR147C YLR236CA0A023PZG4 107 aa1.34□□□□□ -2.19
SMD3YLR147C SEC4P07560 215 aaKnown RBP1.34□□□□□ -2.19
SMD3YLR147C RPL24BP24000 155 aaKnown RBP1.34□□□□□ -2.19
SMD3YLR147C VMA22P38784 181 aa1.34□□□□□ -2.19
SMD3YLR147C RTC3P38804 111 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 354.6 ms