RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YNL010WP53981 241 aaKnown RBP2.32□□□□□ -2.04
EBP2YKL172W CYT2Q00873 224 aa2.32□□□□□ -2.04
EBP2YKL172W GIM5Q04493 163 aa2.32□□□□□ -2.04
EBP2YKL172W ABP140Q08641 628 aaKnown RBP2.32□□□□□ -2.04
EBP2YKL172W THP2O13539 261 aaKnown RBP2.31□□□□□ -2.04
EBP2YKL172W YBR121C-AP0C5L4 52 aa2.31□□□□□ -2.04
EBP2YKL172W YPR170W-BP0C5R9 85 aa2.31□□□□□ -2.04
EBP2YKL172W PRP18P33411 251 aaPredicted RBP2.31□□□□□ -2.04
EBP2YKL172W SVP26P38869 228 aa2.31□□□□□ -2.04
EBP2YKL172W LSM4P40070 187 aaKnown RBP2.31□□□□□ -2.04
EBP2YKL172W PRM10P42946 383 aa2.31□□□□□ -2.04
EBP2YKL172W BRR6P53062 197 aa2.31□□□□□ -2.04
EBP2YKL172W YRA1Q12159 226 aaKnown RBP2.31□□□□□ -2.04
EBP2YKL172W PSF1Q12488 208 aa2.31□□□□□ -2.04
EBP2YKL172W YHR139C-AO13536 103 aa2.3□□□□□ -2.04
EBP2YKL172W CDC33P07260 213 aaKnown RBP2.3□□□□□ -2.04
EBP2YKL172W DDI2P0CH63 225 aa2.3□□□□□ -2.04
EBP2YKL172W DDI3P0CH64 225 aa2.3□□□□□ -2.04
EBP2YKL172W MATALPHA2P0CY08 210 aa2.3□□□□□ -2.04
EBP2YKL172W HMLALPHA2P0CY09 210 aa2.3□□□□□ -2.04
EBP2YKL172W MEI4P29467 408 aa2.3□□□□□ -2.04
EBP2YKL172W SEC72P39742 193 aaKnown RBP2.3□□□□□ -2.04
EBP2YKL172W IRC22P40006 225 aa2.3□□□□□ -2.04
EBP2YKL172W LPP1Q04396 274 aa2.3□□□□□ -2.04
EBP2YKL172W FUS2Q05670 677 aa2.3□□□□□ -2.04
EBP2YKL172W CDC7P06243 507 aa2.29□□□□□ -2.04
EBP2YKL172W PET9P18239 318 aaKnown RBP2.29□□□□□ -2.04
EBP2YKL172W YMR31P19955 123 aa2.29□□□□□ -2.04
EBP2YKL172W ATG22P25568 528 aa2.29□□□□□ -2.04
EBP2YKL172W RME1P32338 300 aaKnown RBP2.29□□□□□ -2.04
EBP2YKL172W MIC12P38341 106 aa2.29□□□□□ -2.04
EBP2YKL172W PGD1P40356 397 aa2.29□□□□□ -2.04
EBP2YKL172W RPL33BP41056 107 aaKnown RBP2.29□□□□□ -2.04
EBP2YKL172W AIF1P52923 378 aa2.29□□□□□ -2.04
EBP2YKL172W GET1P53192 235 aa2.29□□□□□ -2.04
EBP2YKL172W DCN1Q12395 269 aa2.29□□□□□ -2.04
EBP2YKL172W CBF1P17106 351 aa2.28□□□□□ -2.04
EBP2YKL172W CBT1P36038 271 aaPredicted RBP2.28□□□□□ -2.04
EBP2YKL172W ICE2P40499 491 aa2.28□□□□□ -2.04
EBP2YKL172W YDR248CQ03786 193 aa2.28□□□□□ -2.04
EBP2YKL172W RRP17Q04031 235 aaPredicted RBP2.28□□□□□ -2.04
EBP2YKL172W BEM2P39960 2167 aaKnown RBP2.27□□□□□ -2.05
EBP2YKL172W RAD9P14737 1309 aa2.27□□□□□ -2.05
EBP2YKL172W HTB1P02293 131 aaKnown RBP2.27□□□□□ -2.05
EBP2YKL172W HTB2P02294 131 aa2.27□□□□□ -2.05
EBP2YKL172W RPL28P02406 149 aaKnown RBP2.27□□□□□ -2.05
EBP2YKL172W REP2P03872 296 aa2.27□□□□□ -2.05
EBP2YKL172W IDH1P28834 360 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
EBP2YKL172W SRY1P36007 326 aa2.27□□□□□ -2.05
EBP2YKL172W POP4P38336 279 aa2.27□□□□□ -2.05
EBP2YKL172W URA8P38627 578 aaPredicted RBP2.27□□□□□ -2.05
EBP2YKL172W TRM5P38793 499 aa2.27□□□□□ -2.05
EBP2YKL172W RTC3P38804 111 aaPredicted RBP2.27□□□□□ -2.05
EBP2YKL172W ERG28P40030 148 aa2.27□□□□□ -2.05
EBP2YKL172W FAR7P43592 221 aa2.27□□□□□ -2.05
EBP2YKL172W YNR062CP53748 327 aa2.27□□□□□ -2.05
EBP2YKL172W BUD25P85052 153 aa2.27□□□□□ -2.05
EBP2YKL172W TRM12Q04235 462 aa2.27□□□□□ -2.05
EBP2YKL172W YET3Q07451 203 aa2.27□□□□□ -2.05
EBP2YKL172W YKL183C-AQ3E765 70 aa2.27□□□□□ -2.05
EBP2YKL172W ADE1P27616 306 aa2.26□□□□□ -2.05
EBP2YKL172W APS1P35181 156 aa2.26□□□□□ -2.05
EBP2YKL172W FES1P38260 290 aa2.26□□□□□ -2.05
EBP2YKL172W IKI1P38874 309 aa2.26□□□□□ -2.05
EBP2YKL172W AVT2P39981 480 aa2.26□□□□□ -2.05
EBP2YKL172W AGE2P40529 298 aa2.26□□□□□ -2.05
EBP2YKL172W TIR3P40552 269 aa2.26□□□□□ -2.05
EBP2YKL172W BXI1P48558 297 aa2.26□□□□□ -2.05
EBP2YKL172W NUP57P48837 541 aa2.26□□□□□ -2.05
EBP2YKL172W CWC23P52868 283 aaPredicted RBP2.26□□□□□ -2.05
EBP2YKL172W GPM2Q12008 311 aa2.26□□□□□ -2.05
EBP2YKL172W QCR7P00128 127 aa2.25□□□□□ -2.05
EBP2YKL172W CDC28P00546 298 aaKnown RBP2.25□□□□□ -2.05
EBP2YKL172W RPL35AP0CX84 120 aaKnown RBP2.25□□□□□ -2.05
EBP2YKL172W RPL35BP0CX85 120 aaKnown RBP2.25□□□□□ -2.05
EBP2YKL172W MRPS28P21771 286 aa2.25□□□□□ -2.05
EBP2YKL172W APA2P22108 325 aa2.25□□□□□ -2.05
EBP2YKL172W ACP1P32463 125 aa2.25□□□□□ -2.05
EBP2YKL172W MRPL28P36527 147 aa2.25□□□□□ -2.05
EBP2YKL172W YER135CP40082 130 aa2.25□□□□□ -2.05
EBP2YKL172W YNL194CP40169 301 aa2.25□□□□□ -2.05
EBP2YKL172W TMA22P47089 198 aaPredicted RBP2.25□□□□□ -2.05
EBP2YKL172W ALG13P53178 202 aa2.25□□□□□ -2.05
EBP2YKL172W JLP1Q12358 412 aa2.25□□□□□ -2.05
EBP2YKL172W PRX1P34227 261 aaKnown RBP2.24□□□□□ -2.05
EBP2YKL172W TAF14P35189 244 aa2.24□□□□□ -2.05
EBP2YKL172W SHG1P38337 142 aa2.24□□□□□ -2.05
EBP2YKL172W ERG10P41338 398 aaKnown RBP2.24□□□□□ -2.05
EBP2YKL172W IRC18P47056 224 aa2.24□□□□□ -2.05
EBP2YKL172W NOP19P53317 196 aaPredicted RBP2.24□□□□□ -2.05
EBP2YKL172W YLR156WP0CE96 114 aa2.23□□□□□ -2.05
EBP2YKL172W YLR159WP0CE97 114 aa2.23□□□□□ -2.05
EBP2YKL172W YLR161WP0CE98 114 aa2.23□□□□□ -2.05
EBP2YKL172W RFA3P26755 122 aaKnown RBP2.23□□□□□ -2.05
EBP2YKL172W UBC6P33296 250 aaPredicted RBP2.23□□□□□ -2.05
EBP2YKL172W KDX1P36005 433 aa2.23□□□□□ -2.05
EBP2YKL172W SKG1P36169 355 aa2.23□□□□□ -2.05
EBP2YKL172W POG1P40473 351 aa2.23□□□□□ -2.05
EBP2YKL172W MGA1P53050 456 aa2.23□□□□□ -2.05
EBP2YKL172W SML1Q04964 104 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms