RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C CGR1P53188 120 aa1.89□□□□□ -2.11
CTK2YJL006C NUP188P52593 1655 aaKnown RBP1.89□□□□□ -2.11
CTK2YJL006C FKS1P38631 1876 aaKnown RBP1.88□□□□□ -2.11
CTK2YJL006C PPA2P28239 310 aa1.88□□□□□ -2.11
CTK2YJL006C FIS1P40515 155 aa1.88□□□□□ -2.11
CTK2YJL006C NOP13P53883 403 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
CTK2YJL006C ADF1Q2V2Q1 113 aa1.88□□□□□ -2.11
CTK2YJL006C BOL1Q3E793 110 aa1.88□□□□□ -2.11
CTK2YJL006C HTL1Q9URQ5 78 aa1.88□□□□□ -2.11
CTK2YJL006C SEC16P48415 2195 aaKnown RBP1.88□□□□□ -2.11
CTK2YJL006C SNQ2P32568 1501 aaKnown RBP1.87□□□□□ -2.11
CTK2YJL006C VTH1P40438 1549 aa1.87□□□□□ -2.11
CTK2YJL006C VTH2P40890 1549 aa1.87□□□□□ -2.11
CTK2YJL006C DSF1P0CX08 502 aa1.87□□□□□ -2.11
CTK2YJL006C YNR073CP0CX09 502 aa1.87□□□□□ -2.11
CTK2YJL006C MATALPHA1P0CY06 175 aa1.87□□□□□ -2.11
CTK2YJL006C HMLALPHA1P0CY07 175 aa1.87□□□□□ -2.11
CTK2YJL006C RPO26P20435 155 aa1.87□□□□□ -2.11
CTK2YJL006C MRPL25P23369 157 aa1.87□□□□□ -2.11
CTK2YJL006C RPS5P26783 225 aaKnown RBP1.87□□□□□ -2.11
CTK2YJL006C VMA11P32842 164 aa1.87□□□□□ -2.11
CTK2YJL006C COX15P40086 486 aa1.87□□□□□ -2.11
CTK2YJL006C ATO3Q12359 275 aa1.87□□□□□ -2.11
CTK2YJL006C GSC2P40989 1895 aa1.86□□□□□ -2.11
CTK2YJL006C MEC1P38111 2368 aa1.86□□□□□ -2.11
CTK2YJL006C RHO1P06780 209 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C RPL40AP0CH08 128 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C RPL40BP0CH09 128 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C NHP6BP11633 99 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C PBN1P25580 416 aa1.86□□□□□ -2.11
CTK2YJL006C VMA6P32366 345 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C YPT52P36018 234 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C RPF1P38805 295 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C YMR144WP40214 342 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C AYR1P40471 297 aa1.86□□□□□ -2.11
CTK2YJL006C YRB1P41920 201 aaKnown RBP1.86□□□□□ -2.11
CTK2YJL006C RPC17P47076 161 aa1.86□□□□□ -2.11
CTK2YJL006C BNA7Q04066 261 aa1.86□□□□□ -2.11
CTK2YJL006C MSA1Q08471 629 aa1.86□□□□□ -2.11
CTK2YJL006C YLR126CQ12288 251 aa1.86□□□□□ -2.11
CTK2YJL006C GIS3Q12418 502 aa1.86□□□□□ -2.11
CTK2YJL006C YDR034W-BQ6Q5X2 51 aa1.86□□□□□ -2.11
CTK2YJL006C NCB2Q92317 146 aa1.86□□□□□ -2.11
CTK2YJL006C YPL229WQ99395 206 aa1.86□□□□□ -2.11
CTK2YJL006C ARG80P07249 177 aa1.85□□□□□ -2.11
CTK2YJL006C SNA3P14359 133 aa1.85□□□□□ -2.11
CTK2YJL006C VPS21P36017 210 aaKnown RBP1.85□□□□□ -2.11
CTK2YJL006C CUE1P38428 203 aa1.85□□□□□ -2.11
CTK2YJL006C SIP3P38717 1229 aa1.85□□□□□ -2.11
CTK2YJL006C HAM1P47119 197 aaKnown RBP1.85□□□□□ -2.11
CTK2YJL006C EAF6P47128 113 aa1.85□□□□□ -2.11
CTK2YJL006C ILM1P47155 203 aa1.85□□□□□ -2.11
CTK2YJL006C MRPS8Q03799 155 aa1.85□□□□□ -2.11
CTK2YJL006C ATG39Q06159 398 aa1.85□□□□□ -2.11
CTK2YJL006C NIP7Q08962 181 aaKnown RBP1.85□□□□□ -2.11
CTK2YJL006C YOR020W-AQ3E824 90 aa1.85□□□□□ -2.11
CTK2YJL006C SAC3P46674 1301 aa1.85□□□□□ -2.11
CTK2YJL006C SIR4P11978 1358 aa1.85□□□□□ -2.11
CTK2YJL006C THP2O13539 261 aaKnown RBP1.84□□□□□ -2.11
CTK2YJL006C RAS2P01120 322 aaKnown RBP1.84□□□□□ -2.11
CTK2YJL006C RPL9AP05738 191 aaKnown RBP1.84□□□□□ -2.11
CTK2YJL006C FBA1P14540 359 aaKnown RBP1.84□□□□□ -2.11
CTK2YJL006C STE18P18852 110 aa1.84□□□□□ -2.11
CTK2YJL006C COQ1P18900 473 aa1.84□□□□□ -2.11
CTK2YJL006C SCL1P21243 252 aaKnown RBP1.84□□□□□ -2.11
CTK2YJL006C PEX4P29340 183 aa1.84□□□□□ -2.11
CTK2YJL006C MDH3P32419 343 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
CTK2YJL006C CAT5P41735 233 aa1.84□□□□□ -2.11
CTK2YJL006C RPA43P46669 326 aa1.84□□□□□ -2.11
CTK2YJL006C YJR056CP47115 236 aa1.84□□□□□ -2.11
CTK2YJL006C RPL9BP51401 191 aaKnown RBP1.84□□□□□ -2.11
CTK2YJL006C YGR219WP53307 113 aa1.84□□□□□ -2.11
CTK2YJL006C SSQ1Q05931 657 aaPredicted RBP1.84□□□□□ -2.11
CTK2YJL006C SEY1Q99287 776 aa1.84□□□□□ -2.11
CTK2YJL006C FAS2P19097 1887 aaKnown RBP1.84□□□□□ -2.12
CTK2YJL006C CDC36P06100 191 aaPredicted RBP1.83□□□□□ -2.12
CTK2YJL006C YBR121C-AP0C5L4 52 aa1.83□□□□□ -2.12
CTK2YJL006C YMR31P19955 123 aa1.83□□□□□ -2.12
CTK2YJL006C SSO1P32867 290 aa1.83□□□□□ -2.12
CTK2YJL006C MIC12P38341 106 aa1.83□□□□□ -2.12
CTK2YJL006C PRE6P40303 254 aaKnown RBP1.83□□□□□ -2.12
CTK2YJL006C MRPS17Q03246 237 aaPredicted RBP1.83□□□□□ -2.12
CTK2YJL006C ARR2Q06597 130 aa1.83□□□□□ -2.12
CTK2YJL006C YHR139C-AO13536 103 aa1.82□□□□□ -2.12
CTK2YJL006C JIP3O13555 125 aa1.82□□□□□ -2.12
CTK2YJL006C MSW1P04803 379 aa1.82□□□□□ -2.12
CTK2YJL006C CDC33P07260 213 aaKnown RBP1.82□□□□□ -2.12
CTK2YJL006C FCY2P17064 533 aa1.82□□□□□ -2.12
CTK2YJL006C GRX2P17695 143 aaKnown RBP1.82□□□□□ -2.12
CTK2YJL006C PRP18P33411 251 aaPredicted RBP1.82□□□□□ -2.12
CTK2YJL006C RIB1P38066 345 aa1.82□□□□□ -2.12
CTK2YJL006C ECM33P38248 429 aaKnown RBP1.82□□□□□ -2.12
CTK2YJL006C RTC3P38804 111 aaPredicted RBP1.82□□□□□ -2.12
CTK2YJL006C YAR068WP39564 161 aa1.82□□□□□ -2.12
CTK2YJL006C CIS3P47001 227 aa1.82□□□□□ -2.12
CTK2YJL006C MCM22P47167 239 aa1.82□□□□□ -2.12
CTK2YJL006C YJR149WP47177 404 aa1.82□□□□□ -2.12
CTK2YJL006C MIC26P50087 233 aa1.82□□□□□ -2.12
CTK2YJL006C GIM3P53900 129 aa1.82□□□□□ -2.12
CTK2YJL006C TLG1Q03322 224 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms