RNA–Protein interactions for RNA: YHR076W

PTC7, Transcript of Type 2C serine/threonine protein phosphatase (PP2C), yeast

Gene PTC7, Length 1,032 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC7	YHR076W	OST1	P41543	476 aa	Known RBP	5.83	□□□□□ -1.48
PTC7	YHR076W	EGT2	P42835	1041 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	YFL015C	P43578	164 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	TAX4	P47030	604 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	ECM27	P47144	725 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	UFD1	P53044	361 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	PRM15	Q03262	622 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	SYM1	Q06563	197 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	GRC3	Q07845	632 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	SCP1	Q08873	200 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	MED4	Q12343	284 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	CDC39	P25655	2108 aa	Known RBP	5.83	□□□□□ -1.48
PTC7	YHR076W	ACB1	P31787	87 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	GLC7	P32598	312 aa	Known RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	VMA8	P32610	256 aa	Known RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	YPC1	P38298	316 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	PRS2	P38620	318 aa	Known RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	YHL037C	P38733	133 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	VMA22	P38784	181 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	YER079W	P40052	210 aa	Known RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	CCS1	P40202	249 aa	Known RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	MRX5	P47007	382 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	GWT1	P47026	490 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	YJR011C	P47086	261 aa	Predicted RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	UBC13	P52490	153 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	YPL067C	Q02754	198 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	YPL108W	Q02872	168 aa	Predicted RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	CAB5	Q03941	241 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	YMR254C	Q04838	102 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	YNG1	Q08465	219 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	VAM3	Q12241	283 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	PRS5	Q12265	496 aa	Known RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.82	□□□□□ -1.48
PTC7	YHR076W	UBA3	Q99344	299 aa		5.82	□□□□□ -1.48
PTC7	YHR076W	RPS23A	P0CX29	145 aa	Known RBP	5.81	□□□□□ -1.48
PTC7	YHR076W	RPS23B	P0CX30	145 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	PET122	P10355	254 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	MSI1	P13712	422 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	POP8	P38208	133 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	YER137C	P40083	148 aa	Known RBP	5.81	□□□□□ -1.48
PTC7	YHR076W	YMR144W	P40214	342 aa	Known RBP	5.81	□□□□□ -1.48
PTC7	YHR076W	NIF3	P53081	288 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	YML122C	Q03207	126 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	PLP1	Q04004	230 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	API2	Q04413	109 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	YDR286C	Q05530	114 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	UPS1	Q05776	175 aa		5.81	□□□□□ -1.48
PTC7	YHR076W	RPI1	P23250	407 aa	Known RBP	5.8	□□□□□ -1.48
PTC7	YHR076W	YCR061W	P25639	631 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	SIP1	P32578	815 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	HOT13	P36078	116 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	YBR220C	P38318	560 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	PRS3	P38689	320 aa	Known RBP	5.8	□□□□□ -1.48
PTC7	YHR076W	RPL13B	P40212	199 aa	Known RBP	5.8	□□□□□ -1.48
PTC7	YHR076W	PRM5	P40476	318 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	SOL1	P50278	321 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	YPL077C	Q02831	240 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	RTR2	Q12378	196 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	EAF3	Q12432	401 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	RPL13A	Q12690	199 aa	Predicted RBP	5.8	□□□□□ -1.48
PTC7	YHR076W	ATG40	Q99325	256 aa		5.8	□□□□□ -1.48
PTC7	YHR076W	REP2	P03872	296 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	YML003W	P0CF16	290 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	CKA1	P15790	372 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	CKS1	P20486	150 aa	Known RBP	5.79	□□□□□ -1.48
PTC7	YHR076W	MIR1	P23641	311 aa	Known RBP	5.79	□□□□□ -1.48
PTC7	YHR076W	OCH1	P31755	480 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	COS8	P38723	381 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	YGR210C	P42942	411 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	RPA34	P47006	233 aa	Predicted RBP	5.79	□□□□□ -1.48
PTC7	YHR076W	OKP1	P53298	406 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	CRZ1	P53968	678 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	RTT103	Q05543	409 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	YOL029C	Q08187	201 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	RNH203	Q12338	110 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	YLR365W	Q7LIF2	110 aa		5.79	□□□□□ -1.48
PTC7	YHR076W	QCR2	P07257	368 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	FUS3	P16892	353 aa	Known RBP	5.78	□□□□□ -1.48
PTC7	YHR076W	MAG1	P22134	296 aa	Known RBP	5.78	□□□□□ -1.48
PTC7	YHR076W	IMP1	P28627	190 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	PHM8	P40025	321 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	YFL051C	P43552	160 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	ORM1	P53224	222 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	SLX9	P53251	210 aa	Predicted RBP	5.78	□□□□□ -1.48
PTC7	YHR076W	ATP23	P53722	227 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	MEH1	Q02205	184 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	PRP11	Q07350	266 aa	Predicted RBP	5.78	□□□□□ -1.48
PTC7	YHR076W	NCE102	Q12207	173 aa	RIP-Chip data	5.78	□□□□□ -1.48	not detected
PTC7	YHR076W	ISN1	Q99312	450 aa		5.78	□□□□□ -1.48
PTC7	YHR076W	YLL053C	P0CD98	152 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	YUH1	P35127	236 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	FIG1	P38224	298 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	NTC20	P38302	140 aa	Predicted RBP	5.77	□□□□□ -1.49
PTC7	YHR076W	YGP1	P38616	354 aa	Known RBP	5.77	□□□□□ -1.49
PTC7	YHR076W	SYG1	P40528	902 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	SNX4	P47057	423 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	THI74	Q04083	370 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	LIP2	Q06005	328 aa		5.77	□□□□□ -1.49
PTC7	YHR076W	NOC4	Q06512	552 aa	Predicted RBP	5.77	□□□□□ -1.49
PTC7	YHR076W	FEX1	Q08913	375 aa		5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms