RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YOR020W-AQ3E824 90 aa-0.83□□□□□ -2.54
snR50snR50 SWI1P09547 1314 aa-0.84□□□□□ -2.54
snR50snR50 SIR2P06700 562 aa-0.84□□□□□ -2.54
snR50snR50 RPL5P26321 297 aaKnown RBP-0.84□□□□□ -2.54
snR50snR50 POT1P27796 417 aaKnown RBP RIP-Chip data-0.84□□□□□ -2.54not detected
snR50snR50 THO1P40040 218 aaKnown RBP-0.84□□□□□ -2.54
snR50snR50 JEM1P40358 645 aa-0.84□□□□□ -2.54
snR50snR50 HAM1P47119 197 aaKnown RBP-0.84□□□□□ -2.54
snR50snR50 GOT1Q03554 138 aa-0.84□□□□□ -2.54
snR50snR50 TRM12Q04235 462 aa-0.84□□□□□ -2.54
snR50snR50 FIT1Q04433 528 aa-0.84□□□□□ -2.54
snR50snR50 ELP6Q04868 273 aa-0.84□□□□□ -2.54
snR50snR50 GPN3Q06543 272 aa-0.84□□□□□ -2.54
snR50snR50 GPM2Q12008 311 aa-0.84□□□□□ -2.54
snR50snR50 ERP4Q12450 207 aa-0.84□□□□□ -2.54
snR50snR50 SNF8Q12483 233 aa-0.84□□□□□ -2.54
snR50snR50 HTL1Q9URQ5 78 aa-0.84□□□□□ -2.54
snR50snR50 IPP1P00817 287 aaKnown RBP-0.85□□□□□ -2.55
snR50snR50 REP2P03872 296 aa-0.85□□□□□ -2.55
snR50snR50 RPP0P05317 312 aaKnown RBP-0.85□□□□□ -2.55
snR50snR50 POF1P25576 258 aa-0.85□□□□□ -2.55
snR50snR50 BLI1P35727 113 aa-0.85□□□□□ -2.55
snR50snR50 DAD2P36162 133 aa-0.85□□□□□ -2.55
snR50snR50 SWC5P38326 303 aa-0.85□□□□□ -2.55
snR50snR50 LIN1P38852 340 aaPredicted RBP-0.85□□□□□ -2.55
snR50snR50 TDA11P38854 504 aa-0.85□□□□□ -2.55
snR50snR50 CDC40P40968 455 aaPredicted RBP-0.85□□□□□ -2.55
snR50snR50 YML6P51998 286 aa-0.85□□□□□ -2.55
snR50snR50 YDC1Q02896 317 aa-0.85□□□□□ -2.55
snR50snR50 SPC19Q03954 165 aa-0.85□□□□□ -2.55
snR50snR50 UPS3Q04006 179 aa-0.85□□□□□ -2.55
snR50snR50 NIP7Q08962 181 aaKnown RBP-0.85□□□□□ -2.55
snR50snR50 POM33Q12164 279 aa-0.85□□□□□ -2.55
snR50snR50 ECM4P36156 370 aa-0.86□□□□□ -2.55
snR50snR50 MRPL40P36534 297 aa-0.86□□□□□ -2.55
snR50snR50 YBR063CP38083 404 aa-0.86□□□□□ -2.55
snR50snR50 MAK5P38112 773 aaPredicted RBP-0.86□□□□□ -2.55
snR50snR50 ERG28P40030 148 aa-0.86□□□□□ -2.55
snR50snR50 AGP3P43548 558 aa-0.86□□□□□ -2.55
snR50snR50 UBC12P52491 188 aa-0.86□□□□□ -2.55
snR50snR50 YNL010WP53981 241 aaKnown RBP-0.86□□□□□ -2.55
snR50snR50 DAD4P69851 72 aa-0.86□□□□□ -2.55
snR50snR50 PET191Q02772 108 aa-0.86□□□□□ -2.55
snR50snR50 MET31Q03081 177 aa-0.86□□□□□ -2.55
snR50snR50 RNH1Q04740 348 aa-0.86□□□□□ -2.55
snR50snR50 KEI1Q06346 221 aa-0.86□□□□□ -2.55
snR50snR50 YPR174CQ06616 221 aaPredicted RBP-0.86□□□□□ -2.55
snR50snR50 BER1Q06688 274 aaKnown RBP-0.86□□□□□ -2.55
snR50snR50 SME1Q12330 94 aaPredicted RBP-0.86□□□□□ -2.55
snR50snR50 PAA1Q12447 191 aaKnown RBP-0.86□□□□□ -2.55
snR50snR50 SKS1Q12505 502 aa-0.86□□□□□ -2.55
snR50snR50 TUS1Q06412 1307 aa-0.87□□□□□ -2.55
snR50snR50 INH1P01097 85 aa-0.87□□□□□ -2.55
snR50snR50 FCY2P17064 533 aa-0.87□□□□□ -2.55
snR50snR50 ADE1P27616 306 aa-0.87□□□□□ -2.55
snR50snR50 SMI1P32566 505 aa-0.87□□□□□ -2.55
snR50snR50 YKL070WP36087 169 aa-0.87□□□□□ -2.55
snR50snR50 TVP23P38962 199 aa-0.87□□□□□ -2.55
snR50snR50 DSN1P40568 576 aa-0.87□□□□□ -2.55
snR50snR50 CPD1P53314 239 aa-0.87□□□□□ -2.55
snR50snR50 DID2P69771 204 aa-0.87□□□□□ -2.55
snR50snR50 YDR248CQ03786 193 aa-0.87□□□□□ -2.55
snR50snR50 YOR186WQ08560 144 aa-0.87□□□□□ -2.55
snR50snR50 TAR1Q8TGM6 124 aa-0.87□□□□□ -2.55
snR50snR50 STH1P32597 1359 aa-0.87□□□□□ -2.55
snR50snR50 MSF1P08425 469 aa-0.88□□□□□ -2.55
snR50snR50 TAL1P15019 335 aaKnown RBP-0.88□□□□□ -2.55
snR50snR50 JNM1P36224 373 aa-0.88□□□□□ -2.55
snR50snR50 MRPL17P36528 281 aa-0.88□□□□□ -2.55
snR50snR50 YBR285WP38354 144 aa-0.88□□□□□ -2.55
snR50snR50 GDI1P39958 451 aaKnown RBP-0.88□□□□□ -2.55
snR50snR50 PRE6P40303 254 aaKnown RBP-0.88□□□□□ -2.55
snR50snR50 YPL073CP40323 161 aa-0.88□□□□□ -2.55
snR50snR50 GVP36P40531 326 aaKnown RBP-0.88□□□□□ -2.55
snR50snR50 SER2P42941 309 aa-0.88□□□□□ -2.55
snR50snR50 SOL1P50278 321 aa-0.88□□□□□ -2.55
snR50snR50 ABF2Q02486 183 aa-0.88□□□□□ -2.55
snR50snR50 SWP1Q02795 286 aa-0.88□□□□□ -2.55
snR50snR50 VPS71Q03433 280 aa-0.88□□□□□ -2.55
snR50snR50 ATG17Q06410 417 aa-0.88□□□□□ -2.55
snR50snR50 NAT3Q06504 195 aa-0.88□□□□□ -2.55
snR50snR50 ARV1Q06541 321 aa-0.88□□□□□ -2.55
snR50snR50 PAR32Q12515 295 aaKnown RBP-0.88□□□□□ -2.55
snR50snR50 PET18P25362 215 aa-0.89□□□□□ -2.55
snR50snR50 YKR070WP36151 352 aaKnown RBP-0.89□□□□□ -2.55
snR50snR50 ADH5P38113 351 aaKnown RBP-0.89□□□□□ -2.55
snR50snR50 HTD2P38790 280 aaKnown RBP-0.89□□□□□ -2.55
snR50snR50 CDC14Q00684 551 aa-0.89□□□□□ -2.55
snR50snR50 SSQ1Q05931 657 aaPredicted RBP-0.89□□□□□ -2.55
snR50snR50 YDL121CQ07541 149 aa-0.89□□□□□ -2.55
snR50snR50 JLP1Q12358 412 aa-0.89□□□□□ -2.55
snR50snR50 TSC3Q3E790 80 aa-0.89□□□□□ -2.55
snR50snR50 SNF2P22082 1703 aa-0.89□□□□□ -2.55
snR50snR50 CAR2P07991 424 aaKnown RBP-0.9□□□□□ -2.55
snR50snR50 YKR104WP0CE69 306 aa-0.9□□□□□ -2.55
snR50snR50 CLG1P35190 452 aa-0.9□□□□□ -2.55
snR50snR50 HSM3P38348 480 aa-0.9□□□□□ -2.55
snR50snR50 YHL018WP38744 120 aaPredicted RBP-0.9□□□□□ -2.55
snR50snR50 YHR140WP38842 239 aa-0.9□□□□□ -2.55
snR50snR50 SEC28P40509 296 aaKnown RBP-0.9□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms