RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B IPP1P00817 287 aaKnown RBP-0.79□□□□□ -2.54
snR39BsnR39B SEC11P15367 167 aa-0.79□□□□□ -2.54
snR39BsnR39B PET18P25362 215 aa-0.79□□□□□ -2.54
snR39BsnR39B RPS5P26783 225 aaKnown RBP-0.79□□□□□ -2.54
snR39BsnR39B RPC25P35718 212 aa-0.79□□□□□ -2.54
snR39BsnR39B BLI1P35727 113 aa-0.79□□□□□ -2.54
snR39BsnR39B YJR111CP47148 283 aaKnown RBP-0.79□□□□□ -2.54
snR39BsnR39B YNL046WP53956 172 aa-0.79□□□□□ -2.54
snR39BsnR39B YLR297WQ05899 129 aa-0.79□□□□□ -2.54
snR39BsnR39B RRG8Q06109 277 aa-0.79□□□□□ -2.54
snR39BsnR39B CUR1Q06469 252 aa-0.79□□□□□ -2.54
snR39BsnR39B SNF8Q12483 233 aa-0.79□□□□□ -2.54
snR39BsnR39B HTL1Q9URQ5 78 aa-0.79□□□□□ -2.54
snR39BsnR39B YLR236CA0A023PZG4 107 aa-0.8□□□□□ -2.54
snR39BsnR39B MDM35O60200 86 aa-0.8□□□□□ -2.54
snR39BsnR39B REP2P03872 296 aa-0.8□□□□□ -2.54
snR39BsnR39B SEN2P16658 377 aa-0.8□□□□□ -2.54
snR39BsnR39B FCY2P17064 533 aa-0.8□□□□□ -2.54
snR39BsnR39B MRPS28P21771 286 aa-0.8□□□□□ -2.54
snR39BsnR39B UMP1P38293 148 aa-0.8□□□□□ -2.54
snR39BsnR39B SSO2P39926 295 aa-0.8□□□□□ -2.54
snR39BsnR39B FSF1Q12029 327 aaKnown RBP-0.8□□□□□ -2.54
snR39BsnR39B YRA1Q12159 226 aaKnown RBP-0.8□□□□□ -2.54
snR39BsnR39B ATG40Q99325 256 aa-0.8□□□□□ -2.54
snR39BsnR39B YKR104WP0CE69 306 aa-0.81□□□□□ -2.54
snR39BsnR39B CSM1P25651 190 aa-0.81□□□□□ -2.54
snR39BsnR39B YBR063CP38083 404 aa-0.81□□□□□ -2.54
snR39BsnR39B YBR096WP38256 230 aa-0.81□□□□□ -2.54
snR39BsnR39B YAR064WP39563 99 aa-0.81□□□□□ -2.54
snR39BsnR39B GCN20P43535 752 aaKnown RBP-0.81□□□□□ -2.54
snR39BsnR39B VOA1P53262 265 aa-0.81□□□□□ -2.54
snR39BsnR39B YOR020W-AQ3E824 90 aa-0.81□□□□□ -2.54
snR39BsnR39B TUS1Q06412 1307 aa-0.82□□□□□ -2.54
snR39BsnR39B SAR1P20606 190 aaKnown RBP-0.82□□□□□ -2.54
snR39BsnR39B DAL82P21705 255 aa-0.82□□□□□ -2.54
snR39BsnR39B UBC8P28263 218 aa-0.82□□□□□ -2.54
snR39BsnR39B QRI5P32344 111 aa-0.82□□□□□ -2.54
snR39BsnR39B MRPL40P36534 297 aa-0.82□□□□□ -2.54
snR39BsnR39B HPA3P39979 161 aa-0.82□□□□□ -2.54
snR39BsnR39B LOC1P43586 204 aaPredicted RBP-0.82□□□□□ -2.54
snR39BsnR39B YNL010WP53981 241 aaKnown RBP-0.82□□□□□ -2.54
snR39BsnR39B RRP40Q08285 240 aaKnown RBP-0.82□□□□□ -2.54
snR39BsnR39B RAD28Q12021 506 aa-0.82□□□□□ -2.54
snR39BsnR39B ERD2P18414 219 aa-0.83□□□□□ -2.54
snR39BsnR39B DBF2P22204 572 aa-0.83□□□□□ -2.54
snR39BsnR39B SNC2P33328 115 aa-0.83□□□□□ -2.54
snR39BsnR39B YKL070WP36087 169 aa-0.83□□□□□ -2.54
snR39BsnR39B YBR242WP38331 238 aa-0.83□□□□□ -2.54
snR39BsnR39B GOS1P38736 223 aa-0.83□□□□□ -2.54
snR39BsnR39B YFL051CP43552 160 aa-0.83□□□□□ -2.54
snR39BsnR39B HAM1P47119 197 aaKnown RBP-0.83□□□□□ -2.54
snR39BsnR39B SNZ2P53824 298 aa-0.83□□□□□ -2.54
snR39BsnR39B SPG4Q04438 115 aa-0.83□□□□□ -2.54
snR39BsnR39B BCP1Q06338 283 aa-0.83□□□□□ -2.54
snR39BsnR39B ATG17Q06410 417 aa-0.83□□□□□ -2.54
snR39BsnR39B YHR213W-BQ8TGK1 99 aa-0.83□□□□□ -2.54
snR39BsnR39B ODC2Q99297 307 aa-0.83□□□□□ -2.54
snR39BsnR39B KRR1P25586 316 aaPredicted RBP-0.84□□□□□ -2.54
snR39BsnR39B AHT1P29589 182 aa-0.84□□□□□ -2.54
snR39BsnR39B RPT5P33297 434 aaKnown RBP-0.84□□□□□ -2.54
snR39BsnR39B SHE2P36068 246 aaKnown RBP RIP-Chip data-0.84□□□□□ -2.54not detected
snR39BsnR39B MRPL17P36528 281 aa-0.84□□□□□ -2.54
snR39BsnR39B URA8P38627 578 aaPredicted RBP-0.84□□□□□ -2.54
snR39BsnR39B HHY1P39982 102 aa-0.84□□□□□ -2.54
snR39BsnR39B YER034WP40022 185 aaKnown RBP-0.84□□□□□ -2.54
snR39BsnR39B CAT5P41735 233 aa-0.84□□□□□ -2.54
snR39BsnR39B FMP33P46998 180 aa-0.84□□□□□ -2.54
snR39BsnR39B YJR012CP47087 207 aa-0.84□□□□□ -2.54
snR39BsnR39B PRO2P54885 456 aaKnown RBP-0.84□□□□□ -2.54
snR39BsnR39B BNA7Q04066 261 aa-0.84□□□□□ -2.54
snR39BsnR39B CUE4Q04201 117 aaPredicted RBP-0.84□□□□□ -2.54
snR39BsnR39B YPR013CQ12145 317 aa-0.84□□□□□ -2.54
snR39BsnR39B YLR307C-AQ3E825 87 aa-0.84□□□□□ -2.54
snR39BsnR39B YSR3P23501 404 aa-0.85□□□□□ -2.55
snR39BsnR39B PTC1P35182 281 aa-0.85□□□□□ -2.55
snR39BsnR39B DOG2P38773 246 aa-0.85□□□□□ -2.55
snR39BsnR39B IRC22P40006 225 aa-0.85□□□□□ -2.55
snR39BsnR39B PRE6P40303 254 aaKnown RBP-0.85□□□□□ -2.55
snR39BsnR39B EAF6P47128 113 aa-0.85□□□□□ -2.55
snR39BsnR39B ADH6Q04894 360 aaKnown RBP-0.85□□□□□ -2.55
snR39BsnR39B GPM2Q12008 311 aa-0.85□□□□□ -2.55
snR39BsnR39B HFA1P32874 2273 aa-0.86□□□□□ -2.55
snR39BsnR39B YLR156WP0CE96 114 aa-0.86□□□□□ -2.55
snR39BsnR39B YLR159WP0CE97 114 aa-0.86□□□□□ -2.55
snR39BsnR39B YLR161WP0CE98 114 aa-0.86□□□□□ -2.55
snR39BsnR39B VPS3P23643 1011 aa-0.86□□□□□ -2.55
snR39BsnR39B MRPL39P36533 70 aa-0.86□□□□□ -2.55
snR39BsnR39B SMB1P40018 196 aaKnown RBP-0.86□□□□□ -2.55
snR39BsnR39B YPL073CP40323 161 aa-0.86□□□□□ -2.55
snR39BsnR39B DCV1P43595 202 aa-0.86□□□□□ -2.55
snR39BsnR39B YNL260CP53846 198 aa-0.86□□□□□ -2.55
snR39BsnR39B SWP1Q02795 286 aa-0.86□□□□□ -2.55
snR39BsnR39B YMR226CQ05016 267 aaKnown RBP-0.86□□□□□ -2.55
snR39BsnR39B SSQ1Q05931 657 aaPredicted RBP-0.86□□□□□ -2.55
snR39BsnR39B YPR170W-BP0C5R9 85 aa-0.87□□□□□ -2.55
snR39BsnR39B MET16P18408 261 aaPredicted RBP-0.87□□□□□ -2.55
snR39BsnR39B CDC10P25342 322 aaKnown RBP-0.87□□□□□ -2.55
snR39BsnR39B RPB7P34087 171 aa-0.87□□□□□ -2.55
snR39BsnR39B ECM4P36156 370 aa-0.87□□□□□ -2.55
snR39BsnR39B DDI1P40087 428 aa-0.87□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms