RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W YMR111CQ04461 462 aaPredicted RBP-0.04□□□□□ -2.42
PRP39YML046W YLR046CQ12253 270 aa-0.04□□□□□ -2.42
PRP39YML046W ATG5Q12380 294 aa-0.04□□□□□ -2.42
PRP39YML046W NOT5Q12514 560 aaPredicted RBP-0.04□□□□□ -2.42
PRP39YML046W RGS2Q99188 309 aa-0.04□□□□□ -2.42
PRP39YML046W TIM9O74700 87 aa-0.05□□□□□ -2.42
PRP39YML046W RPL35AP0CX84 120 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W RPL35BP0CX85 120 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W IFM1P25038 676 aa-0.05□□□□□ -2.42
PRP39YML046W MDL1P33310 695 aa-0.05□□□□□ -2.42
PRP39YML046W RPS27AP35997 82 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W RPS27BP38711 82 aa-0.05□□□□□ -2.42
PRP39YML046W LRP1P38801 184 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W YHB1P39676 399 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W SMB1P40018 196 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W SOK1P40317 901 aa-0.05□□□□□ -2.42
PRP39YML046W GON7P46984 123 aa-0.05□□□□□ -2.42
PRP39YML046W YPT32P51996 222 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W MPA43P53583 542 aaPredicted RBP-0.05□□□□□ -2.42
PRP39YML046W PIR1Q03178 341 aa-0.05□□□□□ -2.42
PRP39YML046W STE23Q06010 1027 aa-0.05□□□□□ -2.42
PRP39YML046W ASR1Q06834 288 aa-0.05□□□□□ -2.42
PRP39YML046W YDL180WQ12301 547 aa-0.05□□□□□ -2.42
PRP39YML046W DCN1Q12395 269 aa-0.05□□□□□ -2.42
PRP39YML046W MHT1Q12525 324 aa-0.05□□□□□ -2.42
PRP39YML046W RPL2AP0CX45 254 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W RPL2BP0CX46 254 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W THR4P16120 514 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W RDS1P25611 832 aa-0.05□□□□□ -2.42
PRP39YML046W BMH1P29311 267 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W GDH2P33327 1092 aaKnown RBP-0.05□□□□□ -2.42
PRP39YML046W MRPL39P36533 70 aa-0.05□□□□□ -2.42
PRP39YML046W MPC2P38857 129 aa-0.05□□□□□ -2.42
PRP39YML046W ALP1P38971 573 aa-0.05□□□□□ -2.42
PRP39YML046W GCD14P46959 383 aaPredicted RBP-0.05□□□□□ -2.42
PRP39YML046W YNL143CP53908 130 aa-0.05□□□□□ -2.42
PRP39YML046W SPC19Q03954 165 aa-0.05□□□□□ -2.42
PRP39YML046W EMI1Q04406 187 aa-0.05□□□□□ -2.42
PRP39YML046W YPR114WQ06107 315 aa-0.05□□□□□ -2.42
PRP39YML046W YFH1Q07540 174 aa-0.05□□□□□ -2.42
PRP39YML046W PRM3Q08931 133 aa-0.05□□□□□ -2.42
PRP39YML046W YCL048W-AQ2V2Q2 79 aa-0.05□□□□□ -2.42
PRP39YML046W YOS9Q99220 542 aa-0.05□□□□□ -2.42
PRP39YML046W YLL053CP0CD98 152 aa-0.06□□□□□ -2.42
PRP39YML046W YHR214C-DP0CX93 97 aa-0.06□□□□□ -2.42
PRP39YML046W FBA1P14540 359 aaKnown RBP-0.06□□□□□ -2.42
PRP39YML046W UGA1P17649 471 aa-0.06□□□□□ -2.42
PRP39YML046W MDH2P22133 377 aa-0.06□□□□□ -2.42
PRP39YML046W RPN12P32496 274 aa-0.06□□□□□ -2.42
PRP39YML046W SCM4P32564 187 aa-0.06□□□□□ -2.42
PRP39YML046W PEX32P38292 413 aa-0.06□□□□□ -2.42
PRP39YML046W PHO89P38361 574 aa-0.06□□□□□ -2.42
PRP39YML046W ICE2P40499 491 aa-0.06□□□□□ -2.42
PRP39YML046W GLR1P41921 483 aaKnown RBP-0.06□□□□□ -2.42
PRP39YML046W YNR064CP53750 290 aa-0.06□□□□□ -2.42
PRP39YML046W YNL146WP53906 100 aa-0.06□□□□□ -2.42
PRP39YML046W ARP5P53946 755 aa-0.06□□□□□ -2.42
PRP39YML046W AIM36Q03798 255 aa-0.06□□□□□ -2.42
PRP39YML046W YMR114CQ04471 368 aaKnown RBP-0.06□□□□□ -2.42
PRP39YML046W USB1Q12208 290 aaKnown RBP-0.06□□□□□ -2.42
PRP39YML046W YBL112CQ3E7Y4 105 aa-0.06□□□□□ -2.42
PRP39YML046W MDH3P32419 343 aaKnown RBP RIP-Chip data-0.07□□□□□ -2.42not detected
PRP39YML046W SWI3P32591 825 aa-0.07□□□□□ -2.42
PRP39YML046W PRS2P38620 318 aaKnown RBP-0.07□□□□□ -2.42
PRP39YML046W SOP4P39543 234 aaPredicted RBP-0.07□□□□□ -2.42
PRP39YML046W MGA1P53050 456 aa-0.07□□□□□ -2.42
PRP39YML046W PXR1P53335 271 aaPredicted RBP-0.07□□□□□ -2.42
PRP39YML046W SDC1Q03323 175 aa-0.07□□□□□ -2.42
PRP39YML046W SEC10Q06245 871 aa-0.07□□□□□ -2.42
PRP39YML046W MSH5Q12175 901 aa-0.07□□□□□ -2.42
PRP39YML046W YCT1Q12235 531 aa-0.07□□□□□ -2.42
PRP39YML046W CDC8P00572 216 aa-0.07□□□□□ -2.42
PRP39YML046W RPL6BP05739 176 aaKnown RBP-0.07□□□□□ -2.42
PRP39YML046W TIR1P10863 254 aa-0.07□□□□□ -2.42
PRP39YML046W ECM33P38248 429 aaKnown RBP-0.07□□□□□ -2.42
PRP39YML046W YBR219CP38317 127 aa-0.07□□□□□ -2.42
PRP39YML046W YHR122WP38829 231 aa-0.07□□□□□ -2.42
PRP39YML046W PEX18P38855 283 aa-0.07□□□□□ -2.42
PRP39YML046W CYC2P38909 366 aa-0.07□□□□□ -2.42
PRP39YML046W YMR134WP40207 237 aa-0.07□□□□□ -2.42
PRP39YML046W BMT5P40493 336 aa-0.07□□□□□ -2.42
PRP39YML046W FIS1P40515 155 aa-0.07□□□□□ -2.42
PRP39YML046W EFM4P40516 257 aa-0.07□□□□□ -2.42
PRP39YML046W PRM10P42946 383 aa-0.07□□□□□ -2.42
PRP39YML046W TAD2P47058 250 aa-0.07□□□□□ -2.42
PRP39YML046W AAH1P53909 347 aa-0.07□□□□□ -2.42
PRP39YML046W COX12Q01519 83 aa-0.07□□□□□ -2.42
PRP39YML046W RPL6AQ02326 176 aaKnown RBP-0.07□□□□□ -2.42
PRP39YML046W HOR7Q05827 59 aa-0.07□□□□□ -2.42
PRP39YML046W BUR2Q05949 395 aa-0.07□□□□□ -2.42
PRP39YML046W ATG39Q06159 398 aa-0.07□□□□□ -2.42
PRP39YML046W PEX11Q12462 236 aa-0.07□□□□□ -2.42
PRP39YML046W YLR307C-AQ3E825 87 aa-0.07□□□□□ -2.42
PRP39YML046W VAR1P02381 398 aa-0.08□□□□□ -2.42
PRP39YML046W YDR034C-AP0C289 58 aa-0.08□□□□□ -2.42
PRP39YML046W UBA1P22515 1024 aaKnown RBP-0.08□□□□□ -2.42
PRP39YML046W DPB2P24482 689 aaPredicted RBP-0.08□□□□□ -2.42
PRP39YML046W OCH1P31755 480 aa-0.08□□□□□ -2.42
PRP39YML046W ACB1P31787 87 aa-0.08□□□□□ -2.42
PRP39YML046W COT1P32798 439 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms